Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu005686.3 Olea europaea HOM05D006566 ORTHO05D004366 5.3e-121 438.0 262 100.0
SGA_v2.0_scaffold56G20079 Striga asiatica HOM05D006566 ORTHO05D004366 8.8e-60 234.6 332 54.2
MSTRG.23070 Avicennia marina HOM05D006566 ORTHO05D004366 7.5e-59 231.5 351 51.6
CSS0042495 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 5.9e-56 221.9 339 47.5
GSVIVG01007834001 Vitis vinifera HOM05D006566 ORTHO05D004366 7.7e-56 221.5 293 49.1
QL10p013685 Quercus lobata HOM05D006566 ORTHO05D004366 4.2e-54 215.7 315 53.3
Actinidia34964 Actinidia chinensis HOM05D006566 ORTHO05D004366 9.5e-54 214.5 333 49.5
Migut.I00099 Erythranthe guttata HOM05D006566 ORTHO05D004366 1.2e-53 214.2 331 50.8
Actinidia19077 Actinidia chinensis HOM05D006566 ORTHO05D004366 4.7e-53 212.2 297 46.8
Potri.015G070100 Populus trichocarpa HOM05D006566 ORTHO05D004366 1.4e-52 210.7 338 49.1
Atru.chr9.2391 Acer truncatum HOM05D006566 ORTHO05D004366 2.3e-52 209.9 329 48.6
Lsat_1_v5_gn_5_18061 Lactuca sativa HOM05D006566 ORTHO05D004366 2.3e-52 209.9 347 49.6
Sabra15G0094200 Salix brachista HOM05D006566 ORTHO05D004366 2.6e-51 206.5 334 47.9
vmacro16583 Vaccinium macrocarpon HOM05D006566 ORTHO05D004366 2.6e-51 206.5 322 49.1
COL.COLO4_21450 Corchorus olitorius HOM05D006566 ORTHO05D004366 1.7e-50 203.8 312 44.2
CSS0033214 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 2.8e-50 203.0 324 48.8
Manes.06G099800 Manihot esculenta HOM05D006566 ORTHO05D004366 8.3e-50 201.4 352 48.0
Cpa.g.sc35.28 Carica papaya HOM05D006566 ORTHO05D004366 1.4e-49 200.7 330 49.4
Nitab4.5_0000026g0410 Nicotiana tabacum HOM05D006566 ORTHO05D004366 1.8e-49 200.3 285 47.4
Sed0021978 Sechium edule HOM05D006566 ORTHO05D004366 2.4e-49 199.9 353 48.2
Solyc12g027740.3 Solanum lycopersicum HOM05D006566 ORTHO05D004366 1.2e-48 197.6 316 44.9
unitig_749.g13457 Utricularia gibba HOM05D006566 ORTHO05D004366 1.2e-48 197.6 333 42.3
CAN.G1932.4 Capsicum annuum HOM05D006566 ORTHO05D004366 3.5e-48 196.1 358 43.3
ECA246G4585 Erigeron canadensis HOM05D006566 ORTHO05D004366 3.5e-48 196.1 322 50.0
Nitab4.5_0003577g0010 Nicotiana tabacum HOM05D006566 ORTHO05D004366 1.3e-47 194.1 285 46.7
TAR374G0618 Trochodendron aralioides HOM05D006566 ORTHO05D004366 2.3e-47 193.4 358 41.1
CANSAT80G0898 Cannabis sativa HOM05D006566 ORTHO05D004366 6.6e-47 191.8 362 42.8
CsaV3_1G008150 Cucumis sativus L. HOM05D006566 ORTHO05D004366 8.6e-47 191.4 367 44.7
PGR044G1407 Punica granatum HOM05D006566 ORTHO05D004366 8.6e-47 191.4 337 42.7
Thecc.03G002700 Theobroma cacao HOM05D006566 ORTHO05D004366 8.6e-47 191.4 346 44.8
HanXRQChr14g0438811 Helianthus annuus HOM05D006566 ORTHO05D004366 1.1e-46 191.0 353 44.8
CiPaw.12G022600 Carya illinoinensis HOM05D006566 ORTHO05D004366 1.5e-46 190.7 379 44.1
Nn3g17040 Nelumbo nucifera HOM05D006566 ORTHO05D004366 3.3e-46 189.5 367 37.3
Cc04_g16230 Coffea canephora HOM05D006566 ORTHO05D004366 1.2e-45 187.6 354 42.4
Sopen12g012820 Solanum pennellii HOM05D006566 ORTHO05D004366 3.6e-45 186.0 346 44.8
Eucgr.K02884 Eucalyptus grandis HOM05D006566 ORTHO05D004366 4.7e-45 185.7 369 44.4
MD06G1182300 Malus domestica HOM05D006566 ORTHO05D004366 4.0e-44 182.6 337 45.1
Gohir.D08G106700 Gossypium hirsutum HOM05D006566 ORTHO05D004366 1.2e-43 181.0 342 41.8
Ca_21878_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 2.0e-43 180.3 343 42.3
Ca_21886_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 2.0e-43 180.3 343 42.3
Cfa019059 Carpinus fangiana HOM05D006566 ORTHO05D004366 2.6e-43 179.9 344 45.9
THA.LOC104821469 Tarenaya hassleriana HOM05D006566 ORTHO05D004366 2.6e-43 179.9 328 45.1
VMungo1215G1614 Vigna mungo HOM05D006566 ORTHO05D004366 4.4e-43 179.1 342 45.6
Gorai.004G113800 Gossypium raimondii HOM05D006566 ORTHO05D004366 7.5e-43 178.3 342 38.9
Carub.0005s1423 Capsella rubella HOM05D006566 ORTHO05D004366 1.3e-42 177.6 335 38.8
Lj4g0023975 Lotus japonicus HOM05D006566 ORTHO05D004366 3.7e-42 176.0 360 42.2
Psat4g055720 Pisum sativum HOM05D006566 ORTHO05D004366 8.3e-42 174.9 362 41.7
Prupe.5G180400 Prunus persica HOM05D006566 ORTHO05D004366 1.9e-41 173.7 361 41.8
AUR62008294 Chenopodium quinoa HOM05D006566 ORTHO05D004366 5.4e-41 172.2 390 40.0
arahy.Tifrunner.gnm1.ann1.1VUR4R Arachis hypogaea HOM05D006566 ORTHO05D004366 9.2e-41 171.4 367 43.1
Glyma.17G093800 Glycine max HOM05D006566 ORTHO05D004366 9.2e-41 171.4 309 46.0
MD14G1188300 Malus domestica HOM05D006566 ORTHO05D004366 1.6e-40 170.6 349 43.6
Glyma.05G033200 Glycine max HOM05D006566 ORTHO05D004366 3.5e-40 169.5 317 45.4
CARHR156850 Cardamine hirsuta HOM05D006566 ORTHO05D004366 4.6e-40 169.1 339 41.3
FAN13G1045 Fragaria x ananassa HOM05D006566 ORTHO05D004366 4.6e-40 169.1 343 45.5
TPR.G38369 Trifolium pratense HOM05D006566 ORTHO05D004366 7.8e-40 168.3 373 35.7
RcHm_v2.0_Chr7g0179841 Rosa chinensis HOM05D006566 ORTHO05D004366 1.0e-39 167.9 344 42.4
AL5G27450 Arabidopsis lyrata HOM05D006566 ORTHO05D004366 1.3e-39 167.5 328 45.4
FAN04G3214 Fragaria x ananassa HOM05D006566 ORTHO05D004366 1.3e-39 167.5 346 44.8
Lalb_Chr07g0182501 Lupinus albus HOM05D006566 ORTHO05D004366 2.3e-39 166.8 358 38.0
Aqoxy3G00871 Aquilegia oxysepala HOM05D006566 ORTHO05D004366 3.9e-39 166.0 343 45.8
Sp5g13910 Schrenkiella parvula HOM05D006566 ORTHO05D004366 3.9e-39 166.0 332 39.5
Phvul.003G196400 Phaseolus vulgaris HOM05D006566 ORTHO05D004366 5.0e-39 165.6 354 41.8
AT3G48120 Arabidopsis thaliana HOM05D006566 ORTHO05D004366 6.6e-39 165.2 333 42.9
ClCG01G014160 Citrullus lanatus HOM05D006566 ORTHO05D004366 6.6e-39 165.2 362 42.5
FvH4_5g16290 Fragaria vesca HOM05D006566 ORTHO05D004366 6.6e-39 165.2 348 44.5
arahy.Tifrunner.gnm1.ann1.0W0WAG Arachis hypogaea HOM05D006566 ORTHO05D004366 8.6e-39 164.9 363 43.8
Ah.11g046290 Amaranthus hybridus HOM05D006566 ORTHO05D004366 1.1e-38 164.5 376 41.2
BcaB01g00844 Brassica carinata HOM05D006566 ORTHO05D004366 3.3e-38 162.9 337 39.8
FAN18G1223 Fragaria x ananassa HOM05D006566 ORTHO05D004366 3.3e-38 162.9 348 43.7
FAN08G1664 Fragaria x ananassa HOM05D006566 ORTHO05D004366 5.6e-38 162.2 347 40.3
Thhalv10010547m.g Eutrema salsugineum HOM05D006566 ORTHO05D004366 1.2e-37 161.0 329 43.5
BcaC07g39294 Brassica carinata HOM05D006566 ORTHO05D004366 2.1e-37 160.2 317 44.5
BolC8t49939H Brassica oleracea HOM05D006566 ORTHO05D004366 2.1e-37 160.2 317 44.5
A06p19570 Brassica napus HOM05D006566 ORTHO05D004366 2.8e-37 159.8 321 45.8
Aa31LG4G16730 Aethionema arabicum HOM05D006566 ORTHO05D004366 6.2e-37 158.7 342 42.1
C08p23010 Brassica napus HOM05D006566 ORTHO05D004366 3.1e-36 156.4 323 39.3
Medtr4g106550 Medicago truncatula HOM05D006566 ORTHO05D004366 6.8e-36 155.2 370 39.2
EL10Ac5g10849 Beta vulgaris HOM05D006566 ORTHO05D004366 8.9e-36 154.8 388 37.9
AUR62031056 Chenopodium quinoa HOM05D006566 ORTHO05D004366 5.8e-35 152.1 282 46.8
MELO3C002232.2 Cucumis melo HOM05D006566 ORTHO05D004366 7.5e-35 151.8 367 40.9
PSO161G0080 Papaver somniferum HOM05D006566 ORTHO05D004366 7.5e-35 151.8 374 35.0
MBI16_g07135_MAGBIO Magnolia biondii HOM05D006566 ORTHO05D004366 6.4e-34 148.7 363 36.9
Hma1.2p1_0572F.1_g181020 Hydrangea macrophylla HOM05D006566 ORTHO05D004366 2.4e-33 146.7 309 40.1
BcaC07g39293 Brassica carinata HOM05D006566 ORTHO05D004366 1.7e-31 140.6 304 45.1
Os01g0687600 Oryza sativa ssp. japonica HOM05D006566 ORTHO05D004366 3.9e-31 139.4 346 32.7
BraA06t25037Z Brassica rapa HOM05D006566 ORTHO05D004366 4.3e-30 136.0 305 44.3
Zm00001eb156370 Zea mays HOM05D006566 ORTHO05D004366 9.5e-30 134.8 316 38.6
Rhsim12G0161000 Rhododendron simsii HOM05D006566 ORTHO05D004366 1.2e-29 134.4 307 35.8
Hund02706 Selenicereus undatus HOM05D006566 ORTHO05D004366 4.9e-26 122.5 394 30.7
Sabra15G0095700 Salix brachista HOM05D006566 ORTHO05D004366 1.2e-24 117.9 144 48.6
Dinv13130 Davidia involucrata HOM05D006566 ORTHO05D004366 2.1e-24 117.1 239 41.4
Ciclev10023573m.g Citrus clementina HOM05D006566 ORTHO05D004366 3.5e-24 116.3 123 52.0
ATR0712G004 Amborella trichopoda HOM05D006566 ORTHO05D004366 1.3e-23 114.4 378 35.7
Sabra15G0094500 Salix brachista HOM05D006566 ORTHO05D004366 1.7e-23 114.0 154 44.2
Lj5A120T53 Lonicera japonica HOM05D006566 ORTHO05D004366 1.1e-22 111.3 88 60.2
Haze_07429 Corylus avellana HOM05D006566 ORTHO05D004366 3.6e-21 106.3 194 39.2
Lj5P120T28 Lonicera japonica HOM05D006566 ORTHO05D004366 3.6e-21 106.3 87 70.1
CDE06G0758 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 1.8e-20 104.0 115 53.9
SalBow5G4198 Salvia bowleyana HOM05D006566 ORTHO05D004366 3.1e-20 103.2 90 56.7
Sc04g0002180 Simmondsia chinensis HOM05D006566 ORTHO05D004366 5.2e-20 102.4 255 40.0
Gohir.A08G095200 Gossypium hirsutum HOM05D006566 ORTHO05D004366 2.2e-18 97.1 254 39.0
DCAR_026101 Daucus carota HOM05D006566 ORTHO05D004366 3.2e-17 93.2 92 56.5
Peaxi162Scf00496g00038 Petunia axillaris HOM05D006566 ORTHO05D004366 3.2e-17 93.2 93 54.8
arahy.Tifrunner.gnm1.ann1.JH7UH9 Arachis hypogaea HOM05D006566 ORTHO05D004366 1.6e-16 90.9 90 53.3
Nn2g10835 Nelumbo nucifera HOM05D006566 ORTHO05D004366 1.0e-15 88.2 77 63.6
SEGI_22753 Sequoiadendron giganteum HOM05D006566 ORTHO05D004366 1.7e-15 87.4 177 35.0
Oeu042970.1 Olea europaea HOM05D006566 ORTHO05D004366 5.1e-15 85.9 85 60.0
CDE06G1032 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 3.3e-14 83.2 83 60.2
Nn8g38961 Nelumbo nucifera HOM05D006566 ORTHO05D004366 4.3e-14 82.8 75 61.3
AagrBONN_evm.TU.Sc2ySwM_344.1183 Anthoceros agrestis HOM05D006566 ORTHO05D004366 8.1e-13 78.6 407 24.1
SMO367G0338 Selaginella moellendorffii HOM05D013869 ORTHO05D015602 1.8e-12 77.4 150 33.3
HPP92_021882 Vanilla planifolia HOM05D006566 ORTHO05D004366 6.9e-12 75.5 234 41.0
arahy.Tifrunner.gnm1.ann1.SD125V Arachis hypogaea HOM05D006566 ORTHO05D004366 5.8e-11 72.4 51 66.7
arahy.Tifrunner.gnm1.ann1.38ZYM9 Arachis hypogaea HOM05D008215 ORTHO05D004366 6.4e-10 68.9 50 64.0
Pp3c10_4330 Physcomitrium patens HOM05D006566 ORTHO05D004366 1.9e-09 67.4 170 30.6
arahy.Tifrunner.gnm1.ann1.696ALD Arachis hypogaea HOM05D008215 ORTHO05D004366 4.2e-09 66.2 77 46.8
Mapoly0207s0010 Marchantia polymorpha HOM05D006566 ORTHO05D004366 6.0e-08 62.4 85 44.7
arahy.Tifrunner.gnm1.ann1.YEU6LJ Arachis hypogaea HOM05D006566 ORTHO05D004366 1.7e-07 60.8 53 54.7
arahy.Tifrunner.gnm1.ann1.0AYN0M Arachis hypogaea HOM05D008215 ORTHO05D004366 8.7e-07 58.5 77 45.5
arahy.Tifrunner.gnm1.ann1.USZI6Q Arachis hypogaea HOM05D006566 ORTHO05D004366 8.7e-07 58.5 50 56.0
arahy.Tifrunner.gnm1.ann1.1NHG9F Arachis hypogaea HOM05D008215 ORTHO05D004366 1.5e-06 57.8 82 41.5
arahy.Tifrunner.gnm1.ann1.3DHQ20 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.5e-06 57.8 80 42.5
arahy.Tifrunner.gnm1.ann1.1P551D Arachis hypogaea HOM05D008215 ORTHO05D004366 1.9e-06 57.4 77 44.2
arahy.Tifrunner.gnm1.ann1.P21766 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.9e-06 57.4 77 42.9
arahy.Tifrunner.gnm1.ann1.U9CRBQ Arachis hypogaea HOM05D008215 ORTHO05D004366 1.9e-06 57.4 77 44.2
arahy.Tifrunner.gnm1.ann1.TAU4F3 Arachis hypogaea HOM05D008215 ORTHO05D004366 4.3e-06 56.2 80 42.5
arahy.Tifrunner.gnm1.ann1.P1RV09 Arachis hypogaea HOM05D008215 ORTHO05D004366 5.6e-06 55.8 77 42.9


User provided reference genes

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