Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 9.3e-62 240.0 116 100.0
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 8.4e-55 216.9 119 91.6
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 6.9e-49 197.2 116 82.8
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 1.1e-46 189.9 116 77.6
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 3.2e-46 188.3 116 79.3
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 3.2e-46 188.3 116 79.3
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 3.2e-46 188.3 116 79.3
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 5.5e-46 187.6 116 78.4
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 7.2e-46 187.2 116 77.6
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 1.2e-45 186.4 116 76.7
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 1.6e-45 186.0 116 75.9
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 1.6e-45 186.0 116 78.4
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 2.1e-45 185.7 118 78.0
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 2.7e-45 185.3 116 75.0
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 2.7e-45 185.3 116 75.0
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 2.7e-45 185.3 116 77.6
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 2.7e-45 185.3 116 76.7
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 3.6e-45 184.9 116 72.4
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 3.6e-45 184.9 116 74.1
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 4.6e-45 184.5 116 74.1
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 6.1e-45 184.1 116 75.9
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 6.1e-45 184.1 116 77.6
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 1.4e-44 183.0 117 73.5
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 1.4e-44 183.0 116 72.4
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 3.0e-44 181.8 116 78.4
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 5.1e-44 181.0 118 72.0
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 5.1e-44 181.0 116 73.3
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 5.1e-44 181.0 116 73.3
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 5.1e-44 181.0 128 68.0
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 6.7e-44 180.6 116 76.7
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 6.7e-44 180.6 116 73.3
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 1.1e-43 179.9 116 69.8
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 1.1e-43 179.9 116 71.6
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 1.1e-43 179.9 116 73.3
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 2.0e-43 179.1 116 74.1
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 2.0e-43 179.1 116 73.3
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 4.3e-43 177.9 116 74.1
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 4.3e-43 177.9 116 72.4
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 5.7e-43 177.6 116 70.7
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 9.7e-43 176.8 116 70.7
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 9.7e-43 176.8 116 70.7
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 9.7e-43 176.8 116 72.4
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 9.7e-43 176.8 116 70.7
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.3e-42 176.4 116 70.7
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 1.3e-42 176.4 116 71.6
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 1.3e-42 176.4 116 69.8
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 1.7e-42 176.0 116 71.6
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 2.2e-42 175.6 115 73.9
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 2.2e-42 175.6 116 69.8
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 2.2e-42 175.6 116 69.8
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 2.8e-42 175.3 116 72.4
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 2.8e-42 175.3 116 72.4
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 2.8e-42 175.3 116 69.8
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 2.8e-42 175.3 116 69.8
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 3.7e-42 174.9 116 68.1
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 3.7e-42 174.9 116 71.6
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 4.8e-42 174.5 116 71.6
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 6.3e-42 174.1 115 70.4
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 6.3e-42 174.1 116 71.6
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 1.1e-41 173.3 116 69.8
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 1.1e-41 173.3 116 71.6
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 1.4e-41 172.9 116 69.0
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 1.4e-41 172.9 116 70.7
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 1.8e-41 172.6 116 71.6
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 2.4e-41 172.2 116 69.8
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 2.4e-41 172.2 116 69.8
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 3.1e-41 171.8 110 74.5
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 3.1e-41 171.8 116 70.7
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 4.1e-41 171.4 116 71.6
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 4.1e-41 171.4 121 69.4
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 5.3e-41 171.0 117 66.7
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 6.9e-41 170.6 116 70.7
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 6.9e-41 170.6 116 69.8
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 9.1e-41 170.2 116 69.8
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 9.1e-41 170.2 116 70.7
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 9.1e-41 170.2 116 67.2
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 9.1e-41 170.2 116 69.0
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 1.2e-40 169.9 116 69.8
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 1.2e-40 169.9 116 69.8
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 1.5e-40 169.5 116 68.1
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 2.0e-40 169.1 116 69.0
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 2.0e-40 169.1 116 69.8
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 2.0e-40 169.1 116 69.8
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 2.6e-40 168.7 116 69.0
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 2.6e-40 168.7 116 69.0
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 3.4e-40 168.3 116 69.0
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 3.4e-40 168.3 116 69.0
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 3.4e-40 168.3 116 66.4
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 4.5e-40 167.9 116 69.0
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 4.5e-40 167.9 103 78.6
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 4.5e-40 167.9 117 66.7
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 5.9e-40 167.5 114 71.1
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 5.9e-40 167.5 116 68.1
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 7.7e-40 167.2 145 59.3
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 1.3e-39 166.4 116 68.1
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 5.0e-39 164.5 138 58.7
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.4e-38 162.9 137 59.1
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 1.9e-38 162.5 116 67.2
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 1.9e-38 162.5 116 68.1
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 4.2e-38 161.4 116 62.1
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 6.1e-37 157.5 136 58.8
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 3.0e-36 155.2 89 78.7
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 1.1e-35 153.3 112 66.1
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 7.4e-35 150.6 110 64.5
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 6.3e-34 147.5 166 48.8
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 6.3e-34 147.5 103 65.0
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 1.8e-33 146.0 103 68.0
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 4.1e-33 144.8 115 61.7
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 3.5e-32 141.7 115 54.8
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 7.7e-32 140.6 115 58.3
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 7.7e-32 140.6 89 69.7
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 6.5e-31 137.5 113 57.5
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 4.2e-30 134.8 109 61.5
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 1.6e-29 132.9 74 91.9
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 9.7e-27 123.6 84 71.4
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 2.4e-25 119.0 109 53.2
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 4.1e-25 118.2 73 79.5
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 3.5e-24 115.2 73 76.7
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 1.0e-23 113.6 106 48.1
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 5.0e-23 111.3 76 73.7
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 6.5e-23 110.9 73 74.0
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 2.1e-21 105.9 114 48.2
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 8.0e-21 104.0 73 68.5
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 8.0e-21 104.0 74 68.9
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 8.8e-20 100.5 97 49.5
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 1.7e-15 86.3 110 41.8
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 1.9e-14 82.8 62 64.5
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 1.0e-12 77.0 109 37.6
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 5.7e-11 71.2 69 50.7
COL.COLO4_13056 Corchorus olitorius HOM05D005819 ORTHO05D006780 5.4e-09 64.7 43 72.1
ATR1132G123 Amborella trichopoda HOM05D005819 ORTHO05D006780 2.9e-07 58.9 55 49.1
TAR623G0306 Trochodendron aralioides HOM05D003242 ORTHO05D003593 5.0e-07 58.2 42 59.5
Actinidia30496 Actinidia chinensis HOM05D005819 ORTHO05D006780 7.2e-06 54.3 43 60.5


User provided reference genes

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