Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu005543.1 Olea europaea HOM05D003079 ORTHO05D003461 3.7e-302 1040.8 543 100.0
Oeu062673.1 Olea europaea HOM05D003079 ORTHO05D003461 1.2e-116 424.5 365 66.8
MSTRG.13045 Avicennia marina HOM05D003079 ORTHO05D003461 2.6e-114 416.8 563 49.4
MSTRG.16132 Avicennia marina HOM05D003079 ORTHO05D003461 1.4e-112 411.0 563 49.9
Dinv19642 Davidia involucrata HOM05D003079 ORTHO05D003461 4.2e-96 356.3 615 43.4
Sopen07g034350 Solanum pennellii HOM05D003079 ORTHO05D003461 5.5e-96 355.9 551 44.1
Oeu052026.1 Olea europaea HOM05D003079 ORTHO05D003461 3.5e-95 353.2 553 45.8
Actinidia31529 Actinidia chinensis HOM05D003079 ORTHO05D003461 1.3e-94 351.3 595 41.5
SalBow8G1693 Salvia bowleyana HOM05D003079 ORTHO05D003461 2.6e-90 337.0 501 47.3
Nitab4.5_0009408g0020 Nicotiana tabacum HOM05D003079 ORTHO05D003461 3.4e-90 336.7 577 42.6
QL08p000493 Quercus lobata HOM05D003079 ORTHO05D003461 1.3e-89 334.7 624 40.1
CSS0022300 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 4.9e-89 332.8 530 45.8
CSS0035812 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 6.5e-89 332.4 530 45.8
Nitab4.5_0000611g0170 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.4e-88 331.3 590 41.2
Nitab4.5_0000152g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 2.5e-88 330.5 599 42.2
Migut.H01709 Erythranthe guttata HOM05D003079 ORTHO05D003461 1.6e-87 327.8 534 45.9
Dinv40917 Davidia involucrata HOM05D003079 ORTHO05D003461 2.7e-87 327.0 578 42.6
Hma1.2p1_0193F.1_g084340 Hydrangea macrophylla HOM05D003079 ORTHO05D003461 1.5e-85 321.2 601 40.8
PGSC0003DMG400022146 Solanum tuberosum HOM05D003079 ORTHO05D003461 1.9e-85 320.9 553 42.1
CAN.G623.75 Capsicum annuum HOM05D003079 ORTHO05D003461 5.7e-85 319.3 527 42.7
CSS0018146 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 1.5e-82 311.2 607 41.5
Cc05_g15720 Coffea canephora HOM05D003079 ORTHO05D003461 2.6e-82 310.5 613 42.1
Nitab4.5_0001622g0150 Nicotiana tabacum HOM05D003079 ORTHO05D003461 4.5e-82 309.7 593 40.0
Sopen10g001680 Solanum pennellii HOM05D003079 ORTHO05D003461 5.0e-81 306.2 592 39.4
Ciclev10007777m.g Citrus clementina HOM05D003079 ORTHO05D003461 1.4e-80 304.7 629 37.4
PGSC0003DMG400008693 Solanum tuberosum HOM05D003079 ORTHO05D003461 1.4e-80 304.7 593 39.3
Manes.05G204700 Manihot esculenta HOM05D003079 ORTHO05D003461 2.1e-79 300.8 628 36.3
Haze_09917 Corylus avellana HOM05D003079 ORTHO05D003461 1.8e-78 297.7 588 40.0
Migut.M01581 Erythranthe guttata HOM05D003079 ORTHO05D003461 1.8e-78 297.7 485 44.9
CAN.G492.58 Capsicum annuum HOM05D003079 ORTHO05D003461 2.3e-78 297.4 594 38.9
Thecc.07G001500 Theobroma cacao HOM05D003079 ORTHO05D003461 3.9e-78 296.6 640 36.4
Duzib268G0697 Durio zibethinus HOM05D003079 ORTHO05D003461 6.7e-78 295.8 638 36.7
Gorai.013G147800 Gossypium raimondii HOM05D003079 ORTHO05D003461 1.5e-77 294.7 636 36.5
Peaxi162Scf00232g00614 Petunia axillaris HOM05D003079 ORTHO05D003461 1.9e-77 294.3 552 40.2
Gohir.A13G128400 Gossypium hirsutum HOM05D003079 ORTHO05D003461 3.3e-77 293.5 631 36.8
TWI39G1230 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 4.3e-77 293.1 631 37.6
Gohir.D13G131800 Gossypium hirsutum HOM05D003079 ORTHO05D003461 7.4e-77 292.4 636 36.3
Lj1A901G36 Lonicera japonica HOM05D003079 ORTHO05D003461 3.7e-76 290.0 523 41.3
Potri.001G472000 Populus trichocarpa HOM05D003079 ORTHO05D003461 5.3e-75 286.2 575 38.8
TWI14G0136 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 1.5e-74 284.6 631 36.9
Potri.011G169000 Populus trichocarpa HOM05D003079 ORTHO05D003461 8.5e-73 278.9 639 36.9
vmacro11641 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 1.9e-72 277.7 584 37.3
Actinidia30350 Actinidia chinensis HOM05D003079 ORTHO05D003461 7.2e-72 275.8 375 48.0
Rhsim06G0235200 Rhododendron simsii HOM05D003079 ORTHO05D003461 7.2e-72 275.8 605 37.9
TWI38G1795 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 7.2e-72 275.8 633 36.3
Sabra11G0137800 Salix brachista HOM05D003079 ORTHO05D003461 1.2e-71 275.0 601 36.8
Prupe.6G035500 Prunus persica HOM05D003079 ORTHO05D003461 1.6e-71 274.6 617 36.5
SGA_v2.0_scaffold92G28159 Striga asiatica HOM05D003079 ORTHO05D003461 5.1e-70 269.6 568 38.0
Duzib170G0955 Durio zibethinus HOM05D003079 ORTHO05D003461 5.7e-69 266.2 612 35.9
MELO3C014061.2 Cucumis melo HOM05D003079 ORTHO05D003461 9.7e-69 265.4 619 35.1
Nn1g07629 Nelumbo nucifera HOM05D003079 ORTHO05D003461 9.7e-69 265.4 544 36.9
ClCG00G001200 Citrullus lanatus HOM05D003079 ORTHO05D003461 2.2e-68 264.2 623 33.9
ClCG10G003930 Citrullus lanatus HOM05D003079 ORTHO05D003461 2.2e-68 264.2 623 33.9
ClCG10G003820 Citrullus lanatus HOM05D003079 ORTHO05D003461 6.3e-68 262.7 623 33.7
Gohir.A11G276200 Gossypium hirsutum HOM05D003079 ORTHO05D003461 1.8e-67 261.2 611 35.0
TAR627G0159 Trochodendron aralioides HOM05D003079 ORTHO05D003461 1.8e-67 261.2 586 36.0
Cpa.g.sc12.64 Carica papaya HOM05D003079 ORTHO05D003461 2.4e-67 260.8 552 36.6
TAR611G0001 Trochodendron aralioides HOM05D003079 ORTHO05D003461 1.2e-66 258.5 602 35.7
Nitab4.5_0002216g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.5e-66 258.1 457 41.1
CiPaw.12G142800 Carya illinoinensis HOM05D003079 ORTHO05D003461 2.6e-66 257.3 616 35.6
Duzib213G0264 Durio zibethinus HOM05D003079 ORTHO05D003461 5.9e-66 256.1 634 34.2
CiPaw.12G142700 Carya illinoinensis HOM05D003079 ORTHO05D003461 7.7e-66 255.8 617 35.5
RcHm_v2.0_Chr5g0074601 Rosa chinensis HOM05D003079 ORTHO05D003461 8.5e-65 252.3 615 34.8
Gohir.D11G286600 Gossypium hirsutum HOM05D003079 ORTHO05D003461 1.4e-64 251.5 611 34.7
Eucgr.F03644 Eucalyptus grandis HOM05D003079 ORTHO05D003461 2.5e-64 250.8 619 36.7
Gorai.007G310000 Gossypium raimondii HOM05D003079 ORTHO05D003461 2.5e-64 250.8 611 34.7
CANSAT11G2157 Cannabis sativa HOM05D003079 ORTHO05D003461 4.2e-64 250.0 569 36.7
Sed0022199 Sechium edule HOM05D003079 ORTHO05D003461 1.6e-63 248.1 621 34.0
Nitab4.5_0003570g0050 Nicotiana tabacum HOM05D003079 ORTHO05D003461 6.1e-63 246.1 450 39.3
CsaV3_3G003800 Cucumis sativus L. HOM05D003079 ORTHO05D003461 1.1e-61 241.9 568 35.2
Lj8C183T12 Lonicera japonica HOM05D003079 ORTHO05D003461 1.5e-61 241.5 645 35.8
vmacro09798 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 1.7e-60 238.0 768 31.2
DCAR_013756 Daucus carota HOM05D003079 ORTHO05D003461 2.2e-60 237.7 595 36.6
MD11G1046100 Malus domestica HOM05D003079 ORTHO05D003461 2.8e-60 237.3 611 35.0
MD03G1043100 Malus domestica HOM05D003079 ORTHO05D003461 3.7e-60 236.9 562 37.0
Atru.chr2.3897 Acer truncatum HOM05D003079 ORTHO05D003461 4.8e-60 236.5 630 36.2
MBI15_g44396_MAGBIO Magnolia biondii HOM05D003079 ORTHO05D003461 6.3e-60 236.1 587 32.7
Sc03g0011780 Simmondsia chinensis HOM05D003079 ORTHO05D003461 8.2e-60 235.7 597 32.7
Glyma.06G321400 Glycine max HOM05D003079 ORTHO05D003461 3.1e-59 233.8 610 35.9
FAN21G1152 Fragaria x ananassa HOM05D003079 ORTHO05D003461 9.1e-59 232.3 597 34.8
COL.COLO4_07791 Corchorus olitorius HOM05D003079 ORTHO05D003461 7.7e-58 229.2 361 42.7
PGR083G0768 Punica granatum HOM05D003079 ORTHO05D003461 7.7e-58 229.2 589 34.3
GSVIVG01014846001 Vitis vinifera HOM05D003079 ORTHO05D003461 7.7e-58 229.2 567 36.0
Rhsim04G0008000 Rhododendron simsii HOM05D003079 ORTHO05D003461 1.7e-57 228.0 384 46.1
PSO063G6668 Papaver somniferum HOM05D003079 ORTHO05D003461 6.5e-57 226.1 600 32.5
PSO782G1655 Papaver somniferum HOM05D003079 ORTHO05D003461 2.5e-56 224.2 596 32.6
Phvul.L001609 Phaseolus vulgaris HOM05D003079 ORTHO05D003461 5.5e-56 223.0 623 35.2
DCAR_017612 Daucus carota HOM05D003079 ORTHO05D003461 1.8e-54 218.0 607 34.1
FvH4_3g41590 Fragaria vesca HOM05D003079 ORTHO05D003461 8.8e-54 215.7 597 34.2
FAN11G0995 Fragaria x ananassa HOM05D003079 ORTHO05D003461 8.8e-54 215.7 597 34.2
Glyma.04G113700 Glycine max HOM05D003079 ORTHO05D003461 1.1e-53 215.3 611 34.2
Sed0005838 Sechium edule HOM05D003079 ORTHO05D003461 1.1e-53 215.3 623 32.1
TPR.G16690 Trifolium pratense HOM05D003079 ORTHO05D003461 1.1e-53 215.3 574 36.1
arahy.Tifrunner.gnm1.ann1.WAW8B8 Arachis hypogaea HOM05D003079 ORTHO05D003461 2.0e-53 214.5 592 33.8
FAN16G0740 Fragaria x ananassa HOM05D003079 ORTHO05D003461 3.3e-53 213.8 595 33.6
Lj3g0020124 Lotus japonicus HOM05D003079 ORTHO05D003461 3.3e-53 213.8 617 33.5
Lalb_Chr15g0079931 Lupinus albus HOM05D003079 ORTHO05D003461 7.5e-53 212.6 573 35.1
arahy.Tifrunner.gnm1.ann1.FC0SK2 Arachis hypogaea HOM05D003079 ORTHO05D003461 1.8e-51 208.0 595 34.1
Psat5g231200 Pisum sativum HOM05D003079 ORTHO05D003461 2.0e-50 204.5 538 34.9
HanXRQChr11g0335521 Helianthus annuus HOM05D003079 ORTHO05D003461 4.5e-50 203.4 532 35.3
Medtr3g009740 Medicago truncatula HOM05D003079 ORTHO05D003461 7.7e-50 202.6 538 34.2
Oeu052884.2 Olea europaea HOM05D003079 ORTHO05D003461 4.2e-48 196.8 319 44.8
THA.LOC104811703 Tarenaya hassleriana HOM05D003079 ORTHO05D003461 1.8e-46 191.4 617 31.8
Solyc07g066170.4 Solanum lycopersicum HOM05D003079 ORTHO05D003461 1.5e-45 188.3 333 39.6
VMungo1080G0483 Vigna mungo HOM05D003079 ORTHO05D003461 2.6e-45 187.6 600 33.8
TAR626G0479 Trochodendron aralioides HOM05D003079 ORTHO05D003461 4.4e-45 186.8 357 39.8
Aa31LG3G12120 Aethionema arabicum HOM05D003079 ORTHO05D003461 2.4e-43 181.0 514 32.9
MSTRG.14525 Avicennia marina HOM05D003079 ORTHO05D003461 6.1e-39 166.4 286 40.9
Lsat_1_v5_gn_7_115521 Lactuca sativa HOM05D003079 ORTHO05D003461 6.1e-39 166.4 550 33.5
SGA_v2.0_scaffold186G40233 Striga asiatica HOM05D003079 ORTHO05D003461 3.4e-37 160.6 490 33.3
FAN25G3298 Fragaria x ananassa HOM05D003079 ORTHO05D003461 7.0e-35 152.9 598 29.9
ECA236G4881 Erigeron canadensis HOM05D003079 ORTHO05D003461 5.9e-34 149.8 397 36.0
Carub.0007s1447 Capsella rubella HOM05D003079 ORTHO05D003461 7.7e-34 149.4 572 29.5
Thhalv10024990m.g Eutrema salsugineum HOM05D003079 ORTHO05D003461 1.3e-33 148.7 582 30.9
Hund22967 Selenicereus undatus HOM05D003079 ORTHO05D003461 2.3e-33 147.9 590 29.3
CARHR234020 Cardamine hirsuta HOM05D003079 ORTHO05D003461 1.5e-32 145.2 557 30.2
Aqoxy4G02267 Aquilegia oxysepala HOM05D003079 ORTHO05D003461 6.1e-31 139.8 528 29.0
Sp7g24370 Schrenkiella parvula HOM05D003079 ORTHO05D003461 1.4e-30 138.7 583 30.4
unitig_744.g24499 Utricularia gibba HOM05D003079 ORTHO05D003461 3.0e-30 137.5 492 30.1
AL8G31840 Arabidopsis lyrata HOM05D003079 ORTHO05D003461 1.5e-29 135.2 544 30.0
Carub.0008s1653 Capsella rubella HOM05D003079 ORTHO05D003461 2.0e-29 134.8 553 30.7
Oeu006261.2 Olea europaea HOM05D003079 ORTHO05D003461 2.6e-29 134.4 474 31.6
Lalb_Chr04g0259441 Lupinus albus HOM05D003079 ORTHO05D003461 1.1e-27 129.0 523 30.0
Thhalv10013313m.g Eutrema salsugineum HOM05D003079 ORTHO05D003461 7.0e-27 126.3 563 28.1
AL7G26490 Arabidopsis lyrata HOM05D003079 ORTHO05D003461 2.7e-26 124.4 570 28.9
Sp6g18060 Schrenkiella parvula HOM05D003079 ORTHO05D003461 3.5e-26 124.0 568 29.4
AT4G26455 Arabidopsis thaliana HOM05D003079 ORTHO05D003461 1.0e-25 122.5 543 28.9
AT5G56210 Arabidopsis thaliana HOM05D003079 ORTHO05D003461 1.3e-25 122.1 512 29.1
SGA_v2.0_scaffold7G03549 Striga asiatica HOM05D003079 ORTHO05D003461 1.7e-25 121.7 348 33.0
BcaC09g50710 Brassica carinata HOM05D003079 ORTHO05D003461 3.9e-25 120.6 485 28.5
BolC1t02168H Brassica oleracea HOM05D003079 ORTHO05D003461 6.6e-25 119.8 485 28.7
A01p17700 Brassica napus HOM05D003079 ORTHO05D003461 2.1e-23 114.8 491 28.9
BcaNung02417 Brassica carinata HOM05D003079 ORTHO05D003461 3.6e-23 114.0 519 29.9
C01p22370 Brassica napus HOM05D003079 ORTHO05D003461 6.2e-23 113.2 478 28.5
BraA01t01726Z Brassica rapa HOM05D003079 ORTHO05D003461 1.8e-22 111.7 491 28.1
CiPaw.12G142900 Carya illinoinensis HOM05D003079 ORTHO05D003461 2.3e-22 111.3 278 32.7
HPP92_022810 Vanilla planifolia HOM05D003079 ORTHO05D003461 2.3e-22 111.3 473 28.3
HPP92_007490 Vanilla planifolia HOM05D003079 ORTHO05D003461 1.2e-21 109.0 503 27.2
Aa31LG8G580 Aethionema arabicum HOM05D003079 ORTHO05D003461 7.5e-21 106.3 537 26.1
AL3G25210 Arabidopsis lyrata HOM05D003079 ORTHO05D003461 1.6e-18 98.6 524 27.3
Peaxi162Scf00006g00810 Petunia axillaris HOM05D003079 ORTHO05D003461 4.6e-18 97.1 286 30.8
EL10Ac4g08434 Beta vulgaris HOM05D003079 ORTHO05D003461 1.3e-17 95.5 397 29.0
THA.LOC104815679 Tarenaya hassleriana HOM05D003079 ORTHO05D003461 1.7e-17 95.1 521 26.9
Lsat_1_v5_gn_9_88621 Lactuca sativa HOM05D003079 ORTHO05D003461 1.6e-15 88.6 514 27.6
Thhalv10020643m.g Eutrema salsugineum HOM05D003079 ORTHO05D003461 2.1e-15 88.2 522 26.1
AUR62043120 Chenopodium quinoa HOM05D003079 ORTHO05D003461 1.4e-14 85.5 265 31.3
Oeu015272.1 Olea europaea HOM05D003079 ORTHO05D003461 1.8e-14 85.1 133 40.6
Sp3g11560 Schrenkiella parvula HOM05D003079 ORTHO05D003461 2.0e-13 81.6 535 25.8
Zm00001eb316300 Zea mays HOM05D003079 ORTHO05D003461 2.0e-13 81.6 526 27.4
ECA240G3294 Erigeron canadensis HOM05D003079 ORTHO05D003461 5.8e-13 80.1 277 29.6
ATR0751G003 Amborella trichopoda HOM05D003079 ORTHO05D003461 2.2e-12 78.2 396 29.0
Haze_20425 Corylus avellana HOM05D003079 ORTHO05D003461 4.9e-12 77.0 70 62.9
Actinidia03677 Actinidia chinensis HOM05D003079 ORTHO05D003461 8.3e-12 76.3 114 45.6
Zm00001eb101670 Zea mays HOM05D003079 ORTHO05D003461 8.3e-12 76.3 566 25.8
Medtr8g070940 Medicago truncatula HOM05D003079 ORTHO05D003461 5.4e-11 73.6 258 28.3
unitig_21.g20258 Utricularia gibba HOM05D003079 ORTHO05D003461 7.1e-11 73.2 287 27.5
Actinidia30351 Actinidia chinensis HOM05D003079 ORTHO05D003461 9.2e-11 72.8 237 32.1
Haze_07774 Corylus avellana HOM05D003079 ORTHO05D003461 9.2e-11 72.8 70 60.0
Ca_09552_v3 Cicer arietinum L. HOM05D003079 ORTHO05D003461 1.2e-10 72.4 122 42.6
Ca_06048_v3 Cicer arietinum L. HOM05D003079 ORTHO05D003461 1.6e-10 72.0 117 44.4
Aqoxy7G02327 Aquilegia oxysepala HOM05D003079 ORTHO05D003461 2.7e-10 71.2 276 28.6
Os09g0481300 Oryza sativa ssp. japonica HOM05D003079 ORTHO05D003461 3.5e-10 70.9 551 24.1
CDE02G1968 Ceratophyllum demersum HOM05D000308 ORTHO05D003461 6.0e-10 70.1 492 24.4
Ah.06g180930 Amaranthus hybridus HOM05D003079 ORTHO05D003461 7.8e-10 69.7 239 30.5
HanXRQChr03g0079381 Helianthus annuus HOM05D003079 ORTHO05D003461 1.0e-09 69.3 285 28.1
ATR0751G103 Amborella trichopoda HOM05D003079 ORTHO05D003461 3.0e-09 67.8 131 33.6
TAR626G1036 Trochodendron aralioides HOM05D003079 ORTHO05D003461 3.0e-09 67.8 130 36.9
BcaB04g18754 Brassica carinata HOM05D003079 ORTHO05D003461 5.1e-09 67.0 468 24.1
AT3G13360 Arabidopsis thaliana HOM05D003079 ORTHO05D003461 8.6e-09 66.2 425 27.5
Carub.0003s1274 Capsella rubella HOM05D003079 ORTHO05D003461 2.5e-08 64.7 513 25.1
PSO541G1526 Papaver somniferum HOM05D003079 ORTHO05D003461 7.3e-08 63.2 358 26.5
PGSC0003DMG400028881 Solanum tuberosum HOM05D003079 ORTHO05D003461 9.5e-08 62.8 61 52.5
BcaB04g21010 Brassica carinata HOM05D003079 ORTHO05D003461 2.1e-07 61.6 480 23.8
BcaC01g03997 Brassica carinata HOM05D003079 ORTHO05D003461 2.8e-07 61.2 485 24.9
CARHR087980 Cardamine hirsuta HOM05D003079 ORTHO05D003461 2.8e-07 61.2 536 22.0
PGSC0003DMG400029886 Solanum tuberosum HOM05D003079 ORTHO05D003461 2.8e-07 61.2 54 53.7
THA.LOC104810573 Tarenaya hassleriana HOM05D003079 ORTHO05D003461 3.6e-07 60.8 506 24.5
unitig_0.g981 Utricularia gibba HOM05D003079 ORTHO05D003461 4.7e-07 60.5 284 30.6
BolC3t16901H Brassica oleracea HOM05D003079 ORTHO05D003461 8.1e-07 59.7 482 23.7
Ca_27966_v3 Cicer arietinum L. HOM05D003079 ORTHO05D003461 2.3e-06 58.2 135 34.8
A01p40240 Brassica napus HOM05D003079 ORTHO05D003461 3.1e-06 57.8 474 23.8
BraA01t04061Z Brassica rapa HOM05D003079 ORTHO05D003461 4.0e-06 57.4 474 23.8
Lalb_Chr18g0048681 Lupinus albus HOM05D003079 ORTHO05D003461 5.2e-06 57.0 172 32.6


User provided reference genes

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