Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu005474.1 Olea europaea HOM05D004943 ORTHO05D288151 4.3e-212 741.1 392 100.0
Oeu038776.1 Olea europaea HOM05D028901 ORTHO05D289933 2.5e-26 124.0 157 53.5
Oeu039419.1 Olea europaea HOM05D004943 ORTHO05D005953 1.1e-18 98.6 74 73.0
MSTRG.15804 Avicennia marina HOM05D004943 ORTHO05D005953 9.0e-16 89.0 74 64.9
Oeu028336.1 Olea europaea HOM05D028901 ORTHO05D292431 2.6e-15 87.4 236 35.2
Oeu046942.1 Olea europaea HOM05D004943 ORTHO05D005953 2.6e-15 87.4 74 63.5
Migut.H01743 Erythranthe guttata HOM05D004943 ORTHO05D005953 4.5e-15 86.7 74 63.5
CAN.G160.52 Capsicum annuum HOM05D004943 ORTHO05D005953 1.3e-14 85.1 74 60.8
Solyc07g009160.3 Solanum lycopersicum HOM05D004943 ORTHO05D005953 1.7e-14 84.7 74 60.8
PGSC0003DMG400024208 Solanum tuberosum HOM05D004943 ORTHO05D005953 1.7e-14 84.7 74 60.8
MSTRG.7011 Avicennia marina HOM05D004943 ORTHO05D005953 2.2e-14 84.3 74 62.2
Peaxi162Scf00324g00322 Petunia axillaris HOM05D004943 ORTHO05D005953 2.2e-14 84.3 74 63.5
Lalb_Chr13g0300511 Lupinus albus HOM05D004943 ORTHO05D005953 4.9e-14 83.2 74 62.2
Sopen07g017150 Solanum pennellii HOM05D004943 ORTHO05D005953 4.9e-14 83.2 74 59.5
Ca_06409_v3 Cicer arietinum L. HOM05D004943 ORTHO05D005953 6.4e-14 82.8 74 60.8
Medtr5g096260 Medicago truncatula HOM05D004943 ORTHO05D005953 6.4e-14 82.8 74 60.8
Cc05_g15200 Coffea canephora HOM05D004943 ORTHO05D005953 1.1e-13 82.0 74 62.2
Nitab4.5_0000366g0060 Nicotiana tabacum HOM05D004943 ORTHO05D005953 1.1e-13 82.0 74 59.5
Nitab4.5_0007635g0010 Nicotiana tabacum HOM05D004943 ORTHO05D005953 1.1e-13 82.0 74 59.5
SGA_v2.0_scaffold42G15954 Striga asiatica HOM05D004943 ORTHO05D005953 1.1e-13 82.0 74 60.8
Oeu016119.1 Olea europaea HOM05D000363 ORTHO05D000236 1.4e-13 81.6 52 78.8
Psat2g006640 Pisum sativum HOM05D004943 ORTHO05D005953 1.9e-13 81.3 74 59.5
Glyma.02G301900 Glycine max HOM05D004943 ORTHO05D005953 3.2e-13 80.5 72 62.5
Oeu011442.1 Olea europaea HOM05D010625 ORTHO05D289857 4.2e-13 80.1 99 48.5
Solyc10g005780.3 Solanum lycopersicum HOM05D004943 ORTHO05D005953 4.2e-13 80.1 80 58.8
Prupe.6G026500 Prunus persica HOM05D004943 ORTHO05D005953 5.4e-13 79.7 72 62.5
LjContig00081g0027973 Lotus japonicus HOM05D004943 ORTHO05D005953 7.1e-13 79.3 75 57.3
CsaV3_4G029170 Cucumis sativus L. HOM05D004943 ORTHO05D005953 9.3e-13 79.0 74 59.5
Eucgr.F02035 Eucalyptus grandis HOM05D004943 ORTHO05D005953 9.3e-13 79.0 72 58.3
Oeu064198.1 Olea europaea HOM05D028901 ORTHO05D290175 9.3e-13 79.0 198 35.4
Potri.001G370200 Populus trichocarpa HOM05D004943 ORTHO05D005953 9.3e-13 79.0 73 60.3
Sed0027327 Sechium edule HOM05D004943 ORTHO05D005953 1.2e-12 78.6 74 59.5
Sopen10g001750 Solanum pennellii HOM05D004943 ORTHO05D005953 1.2e-12 78.6 75 60.0
ECA236G2729 Erigeron canadensis HOM05D004943 ORTHO05D005953 1.6e-12 78.2 75 61.3
PGSC0003DMG400008685 Solanum tuberosum HOM05D004943 ORTHO05D005953 1.6e-12 78.2 75 58.7
ClCG04G005970 Citrullus lanatus HOM05D004943 ORTHO05D005953 2.1e-12 77.8 74 59.5
QL08p003376 Quercus lobata HOM05D004943 ORTHO05D005953 2.1e-12 77.8 74 58.1
MELO3C019145.2 Cucumis melo HOM05D004943 ORTHO05D005953 2.7e-12 77.4 74 58.1
Phvul.008G280500 Phaseolus vulgaris HOM05D004943 ORTHO05D005953 2.7e-12 77.4 72 61.1
VMungo0647G1317 Vigna mungo HOM05D004943 ORTHO05D005953 2.7e-12 77.4 72 61.1
Gohir.D05G384300 Gossypium hirsutum HOM05D004943 ORTHO05D005953 6.0e-12 76.3 73 61.6
Lalb_Chr07g0180111 Lupinus albus HOM05D004943 ORTHO05D005953 6.0e-12 76.3 74 56.8
Gohir.A04G005400 Gossypium hirsutum HOM05D004943 ORTHO05D005953 7.9e-12 75.9 73 61.6
Gorai.009G451100 Gossypium raimondii HOM05D004943 ORTHO05D005953 7.9e-12 75.9 73 61.6
Hma1.2p1_0023F.1_g015770 Hydrangea macrophylla HOM05D004943 ORTHO05D005953 7.9e-12 75.9 72 58.3
TPR.G36515 Trifolium pratense HOM05D004943 ORTHO05D005953 7.9e-12 75.9 74 59.5
Glyma.14G012300 Glycine max HOM05D004943 ORTHO05D005953 1.0e-11 75.5 72 58.3
RcHm_v2.0_Chr5g0076591 Rosa chinensis HOM05D004943 ORTHO05D005953 1.0e-11 75.5 72 59.7
CiPaw.12G139900 Carya illinoinensis HOM05D004943 ORTHO05D005953 1.3e-11 75.1 74 55.4
Lj3g0015751 Lotus japonicus HOM05D004943 ORTHO05D005953 1.3e-11 75.1 76 56.6
Actinidia35413 Actinidia chinensis HOM05D004943 ORTHO05D005953 1.8e-11 74.7 93 50.5
FvH4_3g42640 Fragaria vesca HOM05D004943 ORTHO05D005953 1.8e-11 74.7 72 59.7
FAN11G3459 Fragaria x ananassa HOM05D004943 ORTHO05D005953 1.8e-11 74.7 72 59.7
FAN21G2115 Fragaria x ananassa HOM05D004943 ORTHO05D005953 1.8e-11 74.7 72 59.7
FAN25G1833 Fragaria x ananassa HOM05D004943 ORTHO05D005953 1.8e-11 74.7 72 59.7
MD11G1035300 Malus domestica HOM05D004943 ORTHO05D005953 1.8e-11 74.7 72 59.7
MD03G1030300 Malus domestica HOM05D004943 ORTHO05D005953 2.3e-11 74.3 72 59.7
Potri.001G370000 Populus trichocarpa HOM05D004943 ORTHO05D005953 2.3e-11 74.3 72 58.3
CiPaw.11G205900 Carya illinoinensis HOM05D004943 ORTHO05D005953 3.0e-11 73.9 74 54.1
Oeu004285.1 Olea europaea HOM05D028901 ORTHO05D290777 3.0e-11 73.9 164 41.5
RcHm_v2.0_Chr5g0076271 Rosa chinensis HOM05D004943 ORTHO05D005953 3.0e-11 73.9 72 59.7
GSVIVG01014728001 Vitis vinifera HOM05D004943 ORTHO05D005953 3.0e-11 73.9 76 56.6
Lj1C893G4 Lonicera japonica HOM05D004943 ORTHO05D005953 3.9e-11 73.6 72 61.1
Haze_09852 Corylus avellana HOM05D004943 ORTHO05D005953 5.1e-11 73.2 70 64.3
Duzib170G0808 Durio zibethinus HOM05D004943 ORTHO05D005953 5.1e-11 73.2 73 56.2
arahy.Tifrunner.gnm1.ann1.5RSY3J Arachis hypogaea HOM05D004943 ORTHO05D005953 6.7e-11 72.8 74 54.1
arahy.Tifrunner.gnm1.ann1.7JU3J0 Arachis hypogaea HOM05D004943 ORTHO05D005953 6.7e-11 72.8 74 54.1
CARHR269310 Cardamine hirsuta HOM05D004943 ORTHO05D005953 8.7e-11 72.4 70 61.4
Cpa.g.sc12.130 Carica papaya HOM05D004943 ORTHO05D005953 8.7e-11 72.4 75 56.0
Cfa016921 Carpinus fangiana HOM05D004943 ORTHO05D005953 8.7e-11 72.4 70 62.9
Carub.0008s1627 Capsella rubella HOM05D004943 ORTHO05D005953 1.1e-10 72.0 70 62.9
AT5G55940 Arabidopsis thaliana HOM05D004943 ORTHO05D005953 1.5e-10 71.6 70 61.4
BraA03t10679Z Brassica rapa HOM05D004943 ORTHO05D005953 1.5e-10 71.6 70 61.4
unitig_746.g26710 Utricularia gibba HOM05D004943 ORTHO05D005953 1.5e-10 71.6 71 59.2
BcaB05g22236 Brassica carinata HOM05D004943 ORTHO05D005953 1.9e-10 71.2 70 60.0
A03p13760 Brassica napus HOM05D004943 ORTHO05D005953 1.9e-10 71.2 70 60.0
BolC2t07679H Brassica oleracea HOM05D004943 ORTHO05D005953 1.9e-10 71.2 73 57.5
COL.COLO4_07727 Corchorus olitorius HOM05D004943 ORTHO05D005953 2.5e-10 70.9 73 54.8
Manes.15G058100 Manihot esculenta HOM05D004943 ORTHO05D005953 2.5e-10 70.9 69 60.9
THA.LOC104813453 Tarenaya hassleriana HOM05D004943 ORTHO05D005953 2.5e-10 70.9 70 61.4
BcaB08g35959 Brassica carinata HOM05D004943 ORTHO05D005953 3.3e-10 70.5 70 60.0
BcaC04g20187 Brassica carinata HOM05D004943 ORTHO05D005953 3.3e-10 70.5 70 60.0
A10p13120 Brassica napus HOM05D004943 ORTHO05D005953 3.3e-10 70.5 70 60.0
C09p46880 Brassica napus HOM05D004943 ORTHO05D005953 3.3e-10 70.5 70 60.0
BolC9t57538H Brassica oleracea HOM05D004943 ORTHO05D005953 3.3e-10 70.5 70 60.0
Lsat_1_v5_gn_5_190221 Lactuca sativa HOM05D004943 ORTHO05D005953 3.3e-10 70.5 75 57.3
Actinidia37138 Actinidia chinensis HOM05D004943 ORTHO05D005953 4.3e-10 70.1 70 58.6
C02p15720 Brassica napus HOM05D004943 ORTHO05D005953 4.3e-10 70.1 70 60.0
C03p16160 Brassica napus HOM05D004943 ORTHO05D005953 4.3e-10 70.1 70 60.0
BolC3t14040H Brassica oleracea HOM05D004943 ORTHO05D005953 4.3e-10 70.1 70 60.0
Thhalv10014684m.g Eutrema salsugineum HOM05D004943 ORTHO05D005953 4.3e-10 70.1 70 60.0
HanXRQChr11g0334381 Helianthus annuus HOM05D004943 ORTHO05D005953 4.3e-10 70.1 75 56.0
Sp6g17790 Schrenkiella parvula HOM05D004943 ORTHO05D005953 4.3e-10 70.1 70 60.0
Sc13g0002830 Simmondsia chinensis HOM05D004943 ORTHO05D005953 4.3e-10 70.1 77 55.8
Ciclev10009430m.g Citrus clementina HOM05D004943 ORTHO05D005953 5.6e-10 69.7 70 60.0
Sabra16G0243100 Salix brachista HOM05D004943 ORTHO05D005953 5.6e-10 69.7 69 59.4
SEGI_32834 Sequoiadendron giganteum HOM05D004943 ORTHO05D005953 5.6e-10 69.7 75 48.0
HanXRQChr04g0114541 Helianthus annuus HOM05D004943 ORTHO05D005953 7.4e-10 69.3 80 53.8
Thecc.07G009400 Theobroma cacao HOM05D004943 ORTHO05D005953 7.4e-10 69.3 73 54.8
Duzib213G0469 Durio zibethinus HOM05D004943 ORTHO05D005953 9.6e-10 68.9 73 53.4
Aa31LG5G11950 Aethionema arabicum HOM05D004943 ORTHO05D005953 1.3e-09 68.6 70 60.0
A02p09420 Brassica napus HOM05D004943 ORTHO05D005953 1.3e-09 68.6 70 58.6
BraA02t06006Z Brassica rapa HOM05D004943 ORTHO05D005953 1.3e-09 68.6 70 58.6
Atru.chr2.3743 Acer truncatum HOM05D004943 ORTHO05D005953 1.6e-09 68.2 70 58.6
BraA10t43408Z Brassica rapa HOM05D004943 ORTHO05D005953 1.6e-09 68.2 70 58.6
Dinv21530 Davidia involucrata HOM05D004943 ORTHO05D005953 2.1e-09 67.8 72 55.6
CSS0011268 Camellia sinensis var. sinensis HOM05D004943 ORTHO05D005953 2.8e-09 67.4 72 55.6
CSS0046003 Camellia sinensis var. sinensis HOM05D004943 ORTHO05D005953 2.8e-09 67.4 72 55.6
AUR62012198 Chenopodium quinoa HOM05D004943 ORTHO05D005953 3.7e-09 67.0 74 50.0
PGR083G1222 Punica granatum HOM05D004943 ORTHO05D005953 3.7e-09 67.0 72 56.9
Actinidia04992 Actinidia chinensis HOM05D004943 ORTHO05D005953 4.8e-09 66.6 75 53.3
EL10Ac2g04777 Beta vulgaris HOM05D004943 ORTHO05D005953 4.8e-09 66.6 71 49.3
FAN16G1336 Fragaria x ananassa HOM05D004943 ORTHO05D005953 4.8e-09 66.6 65 60.0
MD01G1008800 Malus domestica HOM05D004943 ORTHO05D005953 4.8e-09 66.6 72 55.6
AUR62022831 Chenopodium quinoa HOM05D004943 ORTHO05D005953 6.2e-09 66.2 74 50.0
Oeu043545.1 Olea europaea HOM05D010909 ORTHO05D287661 6.2e-09 66.2 51 60.8
Dinv32219 Davidia involucrata HOM05D004943 ORTHO05D005953 8.1e-09 65.9 71 54.9
TWI75G0785 Tripterygium wilfordii HOM05D004943 ORTHO05D005953 8.1e-09 65.9 70 57.1
PSO541G3156 Papaver somniferum HOM05D004943 ORTHO05D005953 1.1e-08 65.5 72 55.6
PSO675G6228 Papaver somniferum HOM05D004943 ORTHO05D005953 1.1e-08 65.5 72 55.6
TAR375G0957 Trochodendron aralioides HOM05D004943 ORTHO05D005953 1.1e-08 65.5 72 56.9
vmacro09630 Vaccinium macrocarpon HOM05D004943 ORTHO05D005953 1.4e-08 65.1 72 55.6
Ah.10g036690 Amaranthus hybridus HOM05D000612 ORTHO05D000461 1.8e-08 64.7 72 48.6
Aa31LG3G11850 Aethionema arabicum HOM05D004943 ORTHO05D005953 4.0e-08 63.5 66 59.1
DCAR_013248 Daucus carota HOM05D004943 ORTHO05D005953 1.5e-07 61.6 65 56.9
Oeu016970.1 Olea europaea HOM05D010909 ORTHO05D290646 1.5e-07 61.6 52 57.7
Nn3g19397 Nelumbo nucifera HOM05D004943 ORTHO05D005953 2.6e-07 60.8 70 52.9
ATR0680G115 Amborella trichopoda HOM05D004943 ORTHO05D005953 3.4e-07 60.5 71 47.9
MBI12_g14493_MAGBIO Magnolia biondii HOM05D004943 ORTHO05D005953 7.6e-07 59.3 69 47.8
Ah.16g103050 Amaranthus hybridus HOM05D000612 ORTHO05D000461 9.9e-07 58.9 72 45.8
Aqoxy1G01190 Aquilegia oxysepala HOM05D004943 ORTHO05D005953 1.3e-06 58.5 72 50.0
HPP92_001543 Vanilla planifolia HOM05D004943 ORTHO05D005953 1.7e-06 58.2 76 46.1
Oeu052572.2 Olea europaea HOM05D010909 ORTHO05D000125 2.2e-06 57.8 73 46.6


User provided reference genes

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