Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu005460.1 Olea europaea HOM05D005769 ORTHO05D006851 5.6e-84 314.3 166 100.0
Dinv40735 Davidia involucrata HOM05D005769 ORTHO05D006851 9.6e-52 207.2 163 68.7
Rhsim04G0001000 Rhododendron simsii HOM05D005769 ORTHO05D006851 5.3e-50 201.4 165 67.9
Rhsim04G0002100 Rhododendron simsii HOM05D005769 ORTHO05D006851 1.5e-49 199.9 165 67.3
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 5.6e-44 181.4 164 60.4
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 5.6e-44 181.4 164 60.4
Nitab4.5_0000653g0070 Nicotiana tabacum HOM05D005769 ORTHO05D006851 9.0e-42 174.1 163 58.9
Nitab4.5_0000749g0110 Nicotiana tabacum HOM05D005769 ORTHO05D006851 2.0e-41 172.9 163 59.5
PGSC0003DMG400014393 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.7e-40 169.9 167 57.5
MSTRG.6907 Avicennia marina HOM05D005769 ORTHO05D006851 2.2e-40 169.5 167 58.7
Sopen10g002310 Solanum pennellii HOM05D005769 ORTHO05D006851 3.8e-40 168.7 167 56.9
Lj8E167T2 Lonicera japonica HOM05D005769 ORTHO05D006851 1.1e-39 167.2 163 58.3
Solyc10g006360.2 Solanum lycopersicum HOM05D005769 ORTHO05D006851 2.4e-39 166.0 167 56.3
Peaxi162Scf00450g00084 Petunia axillaris HOM05D005769 ORTHO05D006851 3.2e-39 165.6 161 59.0
Lj1P869T51 Lonicera japonica HOM05D005769 ORTHO05D006851 9.3e-39 164.1 168 57.7
Nitab4.5_0000397g0340 Nicotiana tabacum HOM05D005769 ORTHO05D006851 9.3e-39 164.1 166 57.2
Prupe.4G209200 Prunus persica HOM05D005769 ORTHO05D006851 1.6e-38 163.3 164 56.1
MD11G1222100 Malus domestica HOM05D005769 ORTHO05D006851 2.7e-38 162.5 164 56.1
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 4.6e-38 161.8 163 56.4
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 1.3e-37 160.2 163 54.0
Atru.chr2.3278 Acer truncatum HOM05D005769 ORTHO05D006851 3.9e-37 158.7 166 56.0
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 3.9e-37 158.7 164 53.7
Nitab4.5_0013016g0010 Nicotiana tabacum HOM05D005769 ORTHO05D006851 8.7e-37 157.5 159 56.0
Peaxi162Scf01097g00025 Petunia axillaris HOM05D005769 ORTHO05D006851 8.7e-37 157.5 163 53.4
Duzib170G0312 Durio zibethinus HOM05D005769 ORTHO05D006851 2.5e-36 156.0 166 55.4
Potri.001G421000 Populus trichocarpa HOM05D005769 ORTHO05D006851 4.3e-36 155.2 164 52.4
CAN.G337.106 Capsicum annuum HOM05D005769 ORTHO05D006851 5.6e-36 154.8 163 56.4
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 9.6e-36 154.1 164 54.3
Duzib213G1024 Durio zibethinus HOM05D005769 ORTHO05D006851 1.3e-35 153.7 165 53.3
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 1.3e-35 153.7 148 61.5
CANSAT21G1553 Cannabis sativa HOM05D005769 ORTHO05D006851 2.1e-35 152.9 163 55.2
Manes.15G073700 Manihot esculenta HOM05D005769 ORTHO05D006851 3.7e-35 152.1 163 52.8
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 6.2e-35 151.4 166 55.4
PGR031G3409 Punica granatum HOM05D005769 ORTHO05D006851 8.1e-35 151.0 163 52.1
Cc05_g13510 Coffea canephora HOM05D005769 ORTHO05D006851 1.4e-34 150.2 163 55.8
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 1.8e-34 149.8 166 51.8
Migut.M01783 Erythranthe guttata HOM05D005769 ORTHO05D006851 2.4e-34 149.4 165 50.9
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 4.0e-34 148.7 166 54.2
PGSC0003DMG400001093 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.5e-33 146.7 163 52.8
Solyc07g064320.3 Solanum lycopersicum HOM05D005769 ORTHO05D006851 2.0e-33 146.4 165 54.5
FAN16G0333 Fragaria x ananassa HOM05D005769 ORTHO05D006851 3.4e-33 145.6 165 53.9
TWI39G0743 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 3.4e-33 145.6 164 50.0
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 4.5e-33 145.2 163 53.4
Sopen07g032470 Solanum pennellii HOM05D005769 ORTHO05D006851 4.5e-33 145.2 165 54.5
PGSC0003DMG400013920 Solanum tuberosum HOM05D005769 ORTHO05D006851 4.5e-33 145.2 164 53.7
SalBow7G1695 Salvia bowleyana HOM05D005769 ORTHO05D006851 5.8e-33 144.8 169 58.6
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 7.6e-33 144.4 175 49.7
FAN21G0668 Fragaria x ananassa HOM05D005769 ORTHO05D006851 2.2e-32 142.9 165 53.3
TAR626G0147 Trochodendron aralioides HOM05D005769 ORTHO05D006851 2.9e-32 142.5 168 50.6
Cpa.g.sc97.35 Carica papaya HOM05D005769 ORTHO05D006851 3.8e-32 142.1 163 54.0
Sabra16G0285900 Salix brachista HOM05D005769 ORTHO05D006851 3.8e-32 142.1 163 49.7
FAN25G3736 Fragaria x ananassa HOM05D005769 ORTHO05D006851 8.4e-32 141.0 165 52.7
FvH4_3g22210 Fragaria vesca HOM05D005769 ORTHO05D006851 1.1e-31 140.6 165 52.7
FAN11G0604 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.1e-31 140.6 165 52.7
Potri.011G136600 Populus trichocarpa HOM05D005769 ORTHO05D006851 1.9e-31 139.8 166 47.6
THA.LOC104813420 Tarenaya hassleriana HOM05D005769 ORTHO05D006851 1.9e-31 139.8 168 50.6
Migut.H01842 Erythranthe guttata HOM05D005769 ORTHO05D006851 9.3e-31 137.5 166 53.0
Gohir.D01G065000 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.6e-30 136.7 166 49.4
Oeu062604.3 Olea europaea HOM05D005769 ORTHO05D006851 1.6e-30 136.7 141 58.9
Ciclev10010329m.g Citrus clementina HOM05D005769 ORTHO05D006851 2.7e-30 136.0 164 51.2
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 2.7e-30 136.0 165 51.5
CiPaw.12G128000 Carya illinoinensis HOM05D005769 ORTHO05D006851 3.5e-30 135.6 163 50.9
Gorai.002G086700 Gossypium raimondii HOM05D005769 ORTHO05D006851 3.5e-30 135.6 166 48.8
TWI38G1097 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 2.3e-29 132.9 166 49.4
Gohir.D05G366600 Gossypium hirsutum HOM05D005769 ORTHO05D006851 5.1e-29 131.7 164 48.2
Gohir.A01G077900 Gossypium hirsutum HOM05D005769 ORTHO05D006851 8.7e-29 131.0 168 50.6
Gohir.A04G019100 Gossypium hirsutum HOM05D005769 ORTHO05D006851 8.7e-29 131.0 164 48.2
Gorai.009G425000 Gossypium raimondii HOM05D005769 ORTHO05D006851 1.1e-28 130.6 164 47.6
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea HOM05D005769 ORTHO05D006851 1.9e-28 129.8 169 45.6
unitig_0.g2389 Utricularia gibba HOM05D005769 ORTHO05D006851 3.3e-28 129.0 163 50.3
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea HOM05D005769 ORTHO05D006851 9.6e-28 127.5 169 45.6
ClCG05G014450 Citrullus lanatus HOM05D005769 ORTHO05D006851 2.1e-27 126.3 174 46.6
Ca_06306_v3 Cicer arietinum L. HOM05D005769 ORTHO05D006851 8.2e-27 124.4 176 44.9
ECA236G2121 Erigeron canadensis HOM05D005769 ORTHO05D006851 2.4e-26 122.9 180 45.6
Glyma.14G025400 Glycine max HOM05D005769 ORTHO05D006851 5.3e-26 121.7 169 46.2
HanXRQChr11g0336271 Helianthus annuus HOM05D005769 ORTHO05D006851 5.3e-26 121.7 169 46.2
LjContig00351g0007061 Lotus japonicus HOM05D005769 ORTHO05D006851 6.9e-26 121.3 172 47.7
MELO3C018076.2 Cucumis melo HOM05D005769 ORTHO05D006851 3.4e-25 119.0 171 46.8
Medtr5g092090 Medicago truncatula HOM05D005769 ORTHO05D006851 3.4e-25 119.0 174 45.4
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 4.5e-25 118.6 169 44.4
Lj4g0016834 Lotus japonicus HOM05D005769 ORTHO05D006851 5.8e-25 118.2 172 46.5
CsaV3_3G023280 Cucumis sativus L. HOM05D005769 ORTHO05D006851 7.6e-25 117.9 170 46.5
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 1.3e-24 117.1 166 44.6
AUR62015707 Chenopodium quinoa HOM05D005769 ORTHO05D006851 2.9e-24 115.9 169 45.0
AUR62020499 Chenopodium quinoa HOM05D005769 ORTHO05D006851 2.9e-24 115.9 167 45.5
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 2.9e-24 115.9 172 43.0
Aa31LG3G10760 Aethionema arabicum HOM05D005769 ORTHO05D006851 3.8e-24 115.5 162 45.1
Lj6g0021335 Lotus japonicus HOM05D005769 ORTHO05D006851 6.5e-24 114.8 168 44.0
SGA_v2.0_scaffold8G04301 Striga asiatica HOM05D005769 ORTHO05D006851 8.4e-24 114.4 164 47.0
Sed0023999 Sechium edule HOM05D005769 ORTHO05D006851 5.5e-23 111.7 169 42.0
PSO675G2145 Papaver somniferum HOM05D005769 ORTHO05D006851 1.2e-22 110.5 166 46.4
Sc16g0006260 Simmondsia chinensis HOM05D005769 ORTHO05D006851 1.6e-22 110.2 201 41.8
BcaC04g20292 Brassica carinata HOM05D005769 ORTHO05D006851 4.6e-22 108.6 190 41.1
BolC9t57410H Brassica oleracea HOM05D005769 ORTHO05D006851 4.6e-22 108.6 190 41.1
Glyma.02G289500 Glycine max HOM05D005769 ORTHO05D006851 4.6e-22 108.6 169 42.6
AT5G54850 Arabidopsis thaliana HOM05D005769 ORTHO05D006851 7.9e-22 107.8 210 38.1
C09p45400 Brassica napus HOM05D005769 ORTHO05D006851 7.9e-22 107.8 187 40.6
BraA10t43314Z Brassica rapa HOM05D005769 ORTHO05D006851 7.9e-22 107.8 187 40.6
AL8G30290 Arabidopsis lyrata HOM05D005769 ORTHO05D006851 1.0e-21 107.5 210 39.0
Aqoxy1G03294 Aquilegia oxysepala HOM05D005769 ORTHO05D006851 1.8e-21 106.7 169 41.4
VMungo0540G0361 Vigna mungo HOM05D005769 ORTHO05D006851 3.0e-21 105.9 162 44.4
PSO541G5959 Papaver somniferum HOM05D005769 ORTHO05D006851 3.9e-21 105.5 170 43.5
BcaB08g35851 Brassica carinata HOM05D005769 ORTHO05D006851 6.7e-21 104.8 187 39.6
Sed0008399 Sechium edule HOM05D005769 ORTHO05D006851 1.5e-20 103.6 169 41.4
CARHR268180 Cardamine hirsuta HOM05D005769 ORTHO05D006851 2.5e-20 102.8 189 39.2
Sp6g16810 Schrenkiella parvula HOM05D005769 ORTHO05D006851 4.3e-20 102.1 187 38.0
A10p12180 Brassica napus HOM05D005769 ORTHO05D006851 5.7e-20 101.7 217 36.9
HanXRQChr05g0159131 Helianthus annuus HOM05D005769 ORTHO05D006851 2.2e-19 99.8 166 45.2
Glyma.18G101700 Glycine max HOM05D005769 ORTHO05D006851 3.7e-19 99.0 162 42.6
arahy.Tifrunner.gnm1.ann1.0M423A Arachis hypogaea HOM05D005769 ORTHO05D006851 4.8e-19 98.6 163 40.5
Thhalv10014809m.g Eutrema salsugineum HOM05D005769 ORTHO05D006851 6.3e-19 98.2 185 36.8
Carub.0008s1514 Capsella rubella HOM05D005769 ORTHO05D006851 2.4e-18 96.3 187 38.5
MBI18_g09843_MAGBIO Magnolia biondii HOM05D005769 ORTHO05D006851 4.1e-18 95.5 137 48.9
Glyma.09G100100 Glycine max HOM05D005769 ORTHO05D006851 1.2e-17 94.0 157 36.9
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 7.7e-17 91.3 172 39.0
Psat2g015240 Pisum sativum HOM05D005769 ORTHO05D006851 2.9e-16 89.4 177 39.5
Hma1.2p1_0328F.1_g126860 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 6.5e-16 88.2 163 38.7
Hma1.2p1_1748F.1_g300680 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.4e-15 87.0 162 38.3
PSO832G0238 Papaver somniferum HOM05D005769 ORTHO05D006851 5.5e-15 85.1 169 36.1
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 1.2e-14 84.0 170 39.4
ECA234G1543 Erigeron canadensis HOM05D005769 ORTHO05D006851 1.2e-14 84.0 170 35.9
Phvul.006G038800 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 1.2e-14 84.0 160 37.5
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 7.9e-14 81.3 162 35.2
HPP92_014114 Vanilla planifolia HOM05D005769 ORTHO05D006851 7.9e-14 81.3 165 38.2
Oeu021395.2 Olea europaea HOM05D005769 ORTHO05D006851 2.3e-13 79.7 166 37.3
Lsat_1_v5_gn_5_125321 Lactuca sativa HOM05D005769 ORTHO05D006851 6.7e-13 78.2 167 36.5
Cc05_g04810 Coffea canephora HOM05D005769 ORTHO05D006851 8.8e-13 77.8 154 37.0
ATR0752G130 Amborella trichopoda HOM05D005769 ORTHO05D006851 7.4e-12 74.7 194 37.1
Zm00001eb322840 Zea mays HOM05D005769 ORTHO05D006851 1.4e-10 70.5 169 36.7
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.5e-09 67.0 154 39.0
Lalb_Chr10g0106921 Lupinus albus HOM05D005769 ORTHO05D006851 1.5e-09 67.0 126 42.1
HanXRQChr10g0305811 Helianthus annuus HOM05D005769 ORTHO05D006851 2.2e-08 63.2 76 44.7
HPP92_012322 Vanilla planifolia HOM05D005769 ORTHO05D006851 1.9e-07 60.1 161 33.5
HPP92_012395 Vanilla planifolia HOM05D005769 ORTHO05D006851 4.2e-07 58.9 161 32.3
DCAR_021174 Daucus carota HOM05D005769 ORTHO05D006851 7.9e-06 54.7 160 32.5


User provided reference genes

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