Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 2.3e-66 255.4 125 100.0
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 2.8e-56 221.9 125 80.0
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 8.2e-56 220.3 125 80.0
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 8.2e-56 220.3 125 80.8
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 1.4e-55 219.5 124 78.2
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 2.4e-55 218.8 125 81.6
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 4.5e-54 214.5 125 76.8
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 4.5e-54 214.5 125 76.8
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 7.7e-54 213.8 125 76.8
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 1.3e-53 213.0 125 80.8
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 2.2e-53 212.2 125 79.2
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 5.0e-53 211.1 125 78.4
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 5.0e-53 211.1 125 78.4
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 5.0e-53 211.1 125 78.4
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 8.5e-53 210.3 125 77.6
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 3.2e-52 208.4 125 79.2
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 4.2e-52 208.0 123 78.0
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 5.5e-52 207.6 125 75.2
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 9.4e-52 206.8 125 74.4
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 9.4e-52 206.8 126 76.2
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 1.6e-51 206.1 125 77.6
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 3.6e-51 204.9 123 77.2
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 6.1e-51 204.1 124 75.8
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 6.1e-51 204.1 124 75.0
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 8.0e-51 203.8 125 76.8
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 1.0e-50 203.4 125 76.8
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 1.0e-50 203.4 124 75.8
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 1.4e-50 203.0 132 73.5
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 4.0e-50 201.4 124 75.0
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 1.2e-49 199.9 129 76.0
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 1.2e-49 199.9 125 73.6
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 1.2e-49 199.9 127 74.8
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 1.5e-49 199.5 125 72.8
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 2.0e-49 199.1 132 75.8
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 2.0e-49 199.1 127 75.6
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 2.6e-49 198.7 125 76.8
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 3.3e-49 198.4 125 72.0
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 3.3e-49 198.4 125 72.0
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 1.7e-48 196.1 125 69.6
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 1.7e-48 196.1 125 73.6
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 1.7e-48 196.1 127 75.6
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 2.8e-48 195.3 125 71.2
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 2.8e-48 195.3 125 71.2
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 2.8e-48 195.3 125 71.2
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 2.8e-48 195.3 125 73.6
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 2.8e-48 195.3 126 73.0
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 3.7e-48 194.9 125 71.2
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 3.7e-48 194.9 125 71.2
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 4.8e-48 194.5 126 73.8
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 4.8e-48 194.5 124 74.2
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 4.8e-48 194.5 107 80.4
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 8.2e-48 193.7 125 74.4
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 1.1e-47 193.4 126 73.0
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.8e-47 192.6 124 71.0
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.8e-47 192.6 124 71.0
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 1.8e-47 192.6 124 66.9
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 1.8e-47 192.6 125 72.0
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 1.8e-47 192.6 147 65.3
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 3.1e-47 191.8 125 72.0
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 4.1e-47 191.4 126 69.0
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 4.1e-47 191.4 126 71.4
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 5.3e-47 191.0 125 71.2
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 5.3e-47 191.0 147 65.3
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 5.3e-47 191.0 125 72.0
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 7.0e-47 190.7 125 72.8
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 7.0e-47 190.7 124 70.2
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 9.1e-47 190.3 125 68.0
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 1.6e-46 189.5 125 68.8
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 2.7e-46 188.7 125 68.8
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 4.5e-46 188.0 125 68.0
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 5.9e-46 187.6 125 70.4
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 7.7e-46 187.2 125 70.4
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 8.5e-45 183.7 127 66.9
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 1.1e-44 183.3 126 69.0
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 1.9e-44 182.6 133 66.9
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 9.4e-44 180.3 125 62.4
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 1.2e-43 179.9 124 64.5
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 1.6e-43 179.5 121 64.5
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 3.6e-43 178.3 100 78.0
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 4.7e-43 177.9 127 64.6
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 8.8e-42 173.7 101 77.2
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 1.2e-41 173.3 126 63.5
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 2.2e-40 169.1 125 61.6
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 3.1e-39 165.2 184 46.2
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 9.1e-39 163.7 126 60.3
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 1.6e-38 162.9 133 62.4
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 2.7e-38 162.2 105 72.4
RcHm_v2.0_Chr5g0035211 Rosa chinensis HOM05D000461 ORTHO05D009042 5.0e-37 157.9 110 69.1
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 5.0e-37 157.9 128 58.6
PGSC0003DMG400019287 Solanum tuberosum HOM05D000461 ORTHO05D009042 1.5e-36 156.4 89 77.5
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 1.8e-34 149.4 113 62.8
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 1.5e-33 146.4 126 61.1
Hma1.2p1_1003F.1_g246740 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 5.7e-33 144.4 82 75.6
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 1.7e-32 142.9 71 87.3
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 1.1e-31 140.2 126 54.0
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 1.8e-31 139.4 126 55.6
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 1.6e-30 136.3 130 49.2
Hund28424 Selenicereus undatus HOM05D000461 ORTHO05D009042 3.8e-29 131.7 120 54.2
Hund28429 Selenicereus undatus HOM05D000461 ORTHO05D009042 3.8e-29 131.7 120 54.2
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 1.9e-28 129.4 126 51.6
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 4.7e-27 124.8 139 43.2
SMO347G0332 Selaginella moellendorffii HOM05D000461 ORTHO05D009042 1.4e-26 123.2 122 46.7
Haze_09518 Corylus avellana HOM05D000461 ORTHO05D009042 2.3e-26 122.5 114 56.1
Manes.15G162800 Manihot esculenta HOM05D000461 ORTHO05D009042 6.8e-26 120.9 88 69.3
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 7.0e-23 110.9 129 43.4
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 3.9e-21 105.1 54 81.5
Pp3c5_7600 Physcomitrium patens HOM05D000461 ORTHO05D009042 6.2e-19 97.8 141 39.0
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 1.0e-13 80.5 42 83.3
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 2.3e-13 79.3 42 81.0
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 6.6e-13 77.8 42 83.3
unitig_85.g27405 Utricularia gibba HOM05D000461 ORTHO05D009042 9.9e-09 63.9 125 37.6
MBI18_g11113_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D009042 3.7e-08 62.0 88 43.2
FAN25G1192 Fragaria x ananassa HOM05D000461 ORTHO05D009042 4.9e-08 61.6 55 61.8
MELO3C030131.2 Cucumis melo HOM05D004229 ORTHO05D025211 1.2e-06 57.0 39 61.5
Oeu060536.1 Olea europaea HOM05D000396 ORTHO05D000116 6.0e-06 54.7 76 44.7


User provided reference genes

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