Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu005415.1 Olea europaea HOM05D003815 ORTHO05D004580 1.2e-169 599.7 302 100.0
CSS0007181 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 1.1e-146 523.5 303 85.8
Dinv04311 Davidia involucrata HOM05D003815 ORTHO05D004580 1.4e-146 523.1 302 86.8
Migut.M00813 Erythranthe guttata HOM05D003815 ORTHO05D004580 1.4e-146 523.1 300 86.7
MSTRG.15225 Avicennia marina HOM05D003815 ORTHO05D004580 4.6e-145 518.1 302 86.4
CSS0031480 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 3.0e-144 515.4 307 84.4
SGA_v2.0_scaffold73G24269 Striga asiatica HOM05D003815 ORTHO05D004580 2.5e-143 512.3 300 84.3
PGR083G0800 Punica granatum HOM05D003815 ORTHO05D004580 9.6e-143 510.4 302 84.4
PGSC0003DMG400025035 Solanum tuberosum HOM05D003815 ORTHO05D004580 4.8e-142 508.1 302 85.1
GSVIVG01014351001 Vitis vinifera HOM05D003815 ORTHO05D004580 8.1e-142 507.3 302 83.8
Sopen10g002890 Solanum pennellii HOM05D003815 ORTHO05D004580 1.2e-140 503.4 302 84.4
TAR629G1246 Trochodendron aralioides HOM05D003815 ORTHO05D004580 1.5e-140 503.1 302 84.8
Nitab4.5_0001551g0080 Nicotiana tabacum HOM05D003815 ORTHO05D004580 6.5e-139 497.7 295 84.7
Peaxi162Scf00027g02616 Petunia axillaris HOM05D003815 ORTHO05D004580 6.5e-139 497.7 293 86.0
DCAR_014380 Daucus carota HOM05D003815 ORTHO05D004580 8.4e-139 497.3 291 85.6
QL08p021520 Quercus lobata HOM05D003815 ORTHO05D004580 1.1e-138 496.9 295 85.1
vmacro11847 Vaccinium macrocarpon HOM05D003815 ORTHO05D004580 2.5e-138 495.7 303 82.2
Cfa020596 Carpinus fangiana HOM05D003815 ORTHO05D004580 3.2e-138 495.4 302 83.4
Solyc10g006980.3 Solanum lycopersicum HOM05D003815 ORTHO05D004580 3.2e-138 495.4 303 83.5
CAN.G162.63 Capsicum annuum HOM05D003815 ORTHO05D004580 4.2e-138 495.0 295 84.4
Nitab4.5_0003688g0100 Nicotiana tabacum HOM05D003815 ORTHO05D004580 7.1e-138 494.2 282 86.2
QL05p086088 Quercus lobata HOM05D003815 ORTHO05D004580 7.1e-138 494.2 295 84.7
EL10Ac4g08152 Beta vulgaris HOM05D003815 ORTHO05D004580 9.3e-138 493.8 297 81.8
Nitab4.5_0002383g0120 Nicotiana tabacum HOM05D003815 ORTHO05D004580 9.3e-138 493.8 302 82.5
ECA238G0528 Erigeron canadensis HOM05D003815 ORTHO05D004580 1.2e-137 493.4 285 85.6
Eucgr.F01118 Eucalyptus grandis HOM05D003815 ORTHO05D004580 4.6e-137 491.5 305 82.3
Ciclev10009061m.g Citrus clementina HOM05D003815 ORTHO05D004580 1.0e-136 490.3 300 83.0
AUR62029379 Chenopodium quinoa HOM05D003815 ORTHO05D004580 1.3e-136 490.0 291 82.8
Nn1g04083 Nelumbo nucifera HOM05D003815 ORTHO05D004580 1.3e-136 490.0 302 80.8
Nitab4.5_0000207g0160 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.8e-136 489.6 292 84.2
PGR004G1265 Punica granatum HOM05D003815 ORTHO05D004580 1.8e-136 489.6 302 81.5
Potri.011G120100 Populus trichocarpa HOM05D003815 ORTHO05D004580 2.3e-136 489.2 292 83.9
Sabra16G0263000 Salix brachista HOM05D003815 ORTHO05D004580 2.3e-136 489.2 291 83.8
Nn1g06558 Nelumbo nucifera HOM05D003815 ORTHO05D004580 1.1e-135 486.9 304 80.9
TWI38G0676 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 1.1e-135 486.9 296 83.4
MBI07_g32649_MAGBIO Magnolia biondii HOM05D003815 ORTHO05D004580 4.3e-135 485.0 301 80.7
Hund02213 Selenicereus undatus HOM05D003815 ORTHO05D004580 4.3e-135 485.0 297 82.5
Ah.06g184010 Amaranthus hybridus HOM05D003815 ORTHO05D004580 7.4e-135 484.2 298 80.5
unitig_899.g15563 Utricularia gibba HOM05D003815 ORTHO05D004580 7.4e-135 484.2 291 81.4
Cc05_g12120 Coffea canephora HOM05D003815 ORTHO05D004580 9.6e-135 483.8 302 81.8
Gohir.A04G029700 Gossypium hirsutum HOM05D003815 ORTHO05D004580 1.6e-134 483.0 292 82.5
Sabra11G0104500 Salix brachista HOM05D003815 ORTHO05D004580 1.6e-134 483.0 292 82.2
Sc07g0002580 Simmondsia chinensis HOM05D003815 ORTHO05D004580 1.6e-134 483.0 301 81.4
THA.LOC104818073 Tarenaya hassleriana HOM05D003815 ORTHO05D004580 1.6e-134 483.0 302 80.1
Manes.03G110800 Manihot esculenta HOM05D003815 ORTHO05D004580 2.1e-134 482.6 296 83.1
CARHR043220 Cardamine hirsuta HOM05D003815 ORTHO05D004580 3.7e-134 481.9 282 83.3
Lalb_Chr03g0030621 Lupinus albus HOM05D003815 ORTHO05D004580 4.8e-134 481.5 287 83.3
Atru.chr2.2652 Acer truncatum HOM05D003815 ORTHO05D004580 6.2e-134 481.1 301 82.4
MD03G1226400 Malus domestica HOM05D003815 ORTHO05D004580 8.2e-134 480.7 292 83.9
Glyma.12G151500 Glycine max HOM05D003815 ORTHO05D004580 1.8e-133 479.6 284 84.5
A08p01870 Brassica napus HOM05D003815 ORTHO05D004580 2.4e-133 479.2 289 81.7
HanXRQChr11g0328431 Helianthus annuus HOM05D003815 ORTHO05D004580 2.4e-133 479.2 304 81.9
AL1G61340 Arabidopsis lyrata HOM05D003815 ORTHO05D004580 4.1e-133 478.4 292 81.5
MELO3C016515.2 Cucumis melo HOM05D003815 ORTHO05D004580 4.1e-133 478.4 302 81.8
Thhalv10011698m.g Eutrema salsugineum HOM05D003815 ORTHO05D004580 4.1e-133 478.4 290 81.0
Gorai.009G389800 Gossypium raimondii HOM05D003815 ORTHO05D004580 5.3e-133 478.0 302 79.8
Psat5g229040 Pisum sativum HOM05D003815 ORTHO05D004580 5.3e-133 478.0 283 83.4
Sp1g39560 Schrenkiella parvula HOM05D003815 ORTHO05D004580 6.9e-133 477.6 292 80.8
Carub.0001s4215 Capsella rubella HOM05D003815 ORTHO05D004580 9.0e-133 477.2 291 81.4
Gohir.D05G357300 Gossypium hirsutum HOM05D003815 ORTHO05D004580 9.0e-133 477.2 302 79.8
Thecc.07G083700 Theobroma cacao HOM05D003815 ORTHO05D004580 9.0e-133 477.2 302 80.5
BcaB02g10966 Brassica carinata HOM05D003815 ORTHO05D004580 1.2e-132 476.9 291 80.4
Lsat_1_v5_gn_7_105160 Lactuca sativa HOM05D003815 ORTHO05D004580 1.2e-132 476.9 293 81.2
BcaC01g01350 Brassica carinata HOM05D003815 ORTHO05D004580 2.0e-132 476.1 286 81.5
C03p90950 Brassica napus HOM05D003815 ORTHO05D004580 2.0e-132 476.1 286 81.5
BolC3t21419H Brassica oleracea HOM05D003815 ORTHO05D004580 2.0e-132 476.1 286 81.5
BraA08t32239Z Brassica rapa HOM05D003815 ORTHO05D004580 3.4e-132 475.3 286 81.5
Glyma.06G245100 Glycine max HOM05D003815 ORTHO05D004580 3.4e-132 475.3 308 79.5
MD11G1244700 Malus domestica HOM05D003815 ORTHO05D004580 3.4e-132 475.3 295 82.4
Prupe.4G183000 Prunus persica HOM05D003815 ORTHO05D004580 3.4e-132 475.3 301 80.7
BcaB04g17128 Brassica carinata HOM05D003815 ORTHO05D004580 4.5e-132 474.9 290 80.3
AT1G53000 Arabidopsis thaliana HOM05D003815 ORTHO05D004580 5.8e-132 474.6 292 80.8
TWI38G0767 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 5.8e-132 474.6 298 80.9
A05p18730 Brassica napus HOM05D003815 ORTHO05D004580 7.6e-132 474.2 288 81.2
Lj3g0026961 Lotus japonicus HOM05D003815 ORTHO05D004580 7.6e-132 474.2 286 82.5
CDE10G1101 Ceratophyllum demersum HOM05D003815 ORTHO05D004580 1.3e-131 473.4 300 81.7
Medtr1g057850 Medicago truncatula HOM05D003815 ORTHO05D004580 1.3e-131 473.4 282 82.6
TPR.G454 Trifolium pratense HOM05D003815 ORTHO05D004580 1.7e-131 473.0 303 79.9
Phvul.011G157900 Phaseolus vulgaris HOM05D003815 ORTHO05D004580 2.2e-131 472.6 287 81.5
Aa31LG10G2090 Aethionema arabicum HOM05D003815 ORTHO05D004580 3.8e-131 471.9 292 81.2
Duzib170G0119 Durio zibethinus HOM05D003815 ORTHO05D004580 3.8e-131 471.9 302 78.8
CsaV3_3G006290 Cucumis sativus L. HOM05D003815 ORTHO05D004580 8.4e-131 470.7 302 79.8
Lj3g0002488 Lotus japonicus HOM05D003815 ORTHO05D004580 1.1e-130 470.3 299 80.9
Lalb_Chr01g0006511 Lupinus albus HOM05D003815 ORTHO05D004580 1.9e-130 469.5 302 78.5
arahy.Tifrunner.gnm1.ann1.46T9HD Arachis hypogaea HOM05D003815 ORTHO05D004580 2.5e-130 469.2 284 82.0
CAN.G1110.56 Capsicum annuum HOM05D003815 ORTHO05D004580 2.5e-130 469.2 266 86.1
Sed0012787 Sechium edule HOM05D003815 ORTHO05D004580 2.5e-130 469.2 302 80.5
FAN16G0735 Fragaria x ananassa HOM05D003815 ORTHO05D004580 3.2e-130 468.8 284 83.1
PSO541G6182 Papaver somniferum HOM05D003815 ORTHO05D004580 3.2e-130 468.8 290 81.4
Potri.001G400900 Populus trichocarpa HOM05D003815 ORTHO05D004580 3.2e-130 468.8 292 81.2
RcHm_v2.0_Chr5g0033991 Rosa chinensis HOM05D003815 ORTHO05D004580 5.5e-130 468.0 304 79.9
Aqoxy1G02432 Aquilegia oxysepala HOM05D003815 ORTHO05D004580 1.2e-129 466.8 300 79.3
PSO675G7971 Papaver somniferum HOM05D003815 ORTHO05D004580 1.2e-129 466.8 290 81.0
SalBow8G0761 Salvia bowleyana HOM05D003815 ORTHO05D004580 3.5e-129 465.3 271 86.0
C06p14350 Brassica napus HOM05D003815 ORTHO05D004580 4.6e-129 464.9 286 80.8
FAN11G0414 Fragaria x ananassa HOM05D003815 ORTHO05D004580 4.6e-129 464.9 297 80.1
COL.COLO4_09397 Corchorus olitorius HOM05D003815 ORTHO05D004580 7.9e-129 464.2 293 80.2
BraA05t20769Z Brassica rapa HOM05D003815 ORTHO05D004580 1.0e-128 463.8 278 81.3
AUR62034260 Chenopodium quinoa HOM05D003815 ORTHO05D004580 1.3e-128 463.4 292 80.1
FAN21G2274 Fragaria x ananassa HOM05D003815 ORTHO05D004580 6.7e-128 461.1 284 82.7
Actinidia01882 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.1e-127 460.3 297 78.8
Cfa000456 Carpinus fangiana HOM05D003815 ORTHO05D004580 1.1e-127 460.3 301 77.4
Peaxi162Scf00069g01341 Petunia axillaris HOM05D003815 ORTHO05D004580 3.3e-127 458.8 289 81.3
HPP92_021319 Vanilla planifolia HOM05D003815 ORTHO05D004580 3.3e-127 458.8 305 76.7
GSVIVG01005203001 Vitis vinifera HOM05D003815 ORTHO05D004580 3.3e-127 458.8 292 79.5
Lsat_1_v5_gn_7_21261 Lactuca sativa HOM05D003815 ORTHO05D004580 4.3e-127 458.4 285 81.1
RcHm_v2.0_Chr5g0008351 Rosa chinensis HOM05D003815 ORTHO05D004580 4.3e-127 458.4 294 79.6
Actinidia09679 Actinidia chinensis HOM05D003815 ORTHO05D004580 9.7e-127 457.2 270 85.6
ATR0605G309 Amborella trichopoda HOM05D003815 ORTHO05D004580 9.7e-127 457.2 284 79.6
Lj8A54T73 Lonicera japonica HOM05D003815 ORTHO05D004580 3.7e-126 455.3 329 71.7
Zm00001eb343610 Zea mays HOM05D003815 ORTHO05D004580 3.7e-126 455.3 302 74.8
QL05p040244 Quercus lobata HOM05D003815 ORTHO05D004580 3.1e-125 452.2 291 77.7
CiPaw.09G059900 Carya illinoinensis HOM05D003815 ORTHO05D004580 4.1e-125 451.8 281 79.4
SGA_v2.0_scaffold34G13823 Striga asiatica HOM05D003815 ORTHO05D004580 5.3e-125 451.4 266 86.8
Os05g0561500 Oryza sativa ssp. japonica HOM05D003815 ORTHO05D004580 1.2e-124 450.3 302 76.8
Lj1A1206T62 Lonicera japonica HOM05D003815 ORTHO05D004580 1.5e-124 449.9 302 75.8
ClCG10G006920 Citrullus lanatus HOM05D003815 ORTHO05D004580 2.9e-123 445.7 315 75.6
SEGI_36185 Sequoiadendron giganteum HOM05D003815 ORTHO05D004580 4.2e-122 441.8 298 75.5
arahy.Tifrunner.gnm1.ann1.NKF69P Arachis hypogaea HOM05D003815 ORTHO05D004580 3.9e-120 435.3 287 77.0
Duzib213G0989 Durio zibethinus HOM05D003815 ORTHO05D004580 5.1e-120 434.9 302 75.5
Haze_09417 Corylus avellana HOM05D003815 ORTHO05D004580 6.7e-120 434.5 366 65.6
FAN25G2093 Fragaria x ananassa HOM05D003815 ORTHO05D004580 2.5e-114 416.0 273 79.5
CiPaw.11G168500 Carya illinoinensis HOM05D003815 ORTHO05D004580 7.2e-114 414.5 221 92.3
BcaC08g44025 Brassica carinata HOM05D003815 ORTHO05D004580 4.7e-113 411.8 279 74.2
Haze_06461 Corylus avellana HOM05D003815 ORTHO05D004580 8.8e-112 407.5 280 74.3
Prupe.4G047000 Prunus persica HOM05D003815 ORTHO05D004580 4.4e-111 405.2 261 78.2
Rhsim06G0197600 Rhododendron simsii HOM05D003815 ORTHO05D004580 5.7e-111 404.8 221 89.1
Pp3c7_2170 Physcomitrium patens HOM05D003815 ORTHO05D004580 4.5e-108 395.2 287 67.9
Ca_12190_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 1.3e-107 393.7 218 87.6
Ca_30578_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 1.3e-107 393.7 218 87.6
Actinidia12813 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.2e-105 387.1 305 69.5
AagrBONN_evm.TU.Sc2ySwM_344.3202 Anthoceros agrestis HOM05D003815 ORTHO05D004580 2.1e-105 386.3 250 74.0
Mapoly0026s0027 Marchantia polymorpha HOM05D003815 ORTHO05D004580 1.1e-101 374.0 252 70.2
SMO196G0043 Selaginella moellendorffii HOM05D003815 ORTHO05D004580 4.1e-101 372.1 253 71.5
Dinv40557 Davidia involucrata HOM05D003815 ORTHO05D004580 1.6e-97 360.1 200 88.0
Oeu060549.1 Olea europaea HOM05D003815 ORTHO05D004580 3.6e-97 359.0 208 87.0
FvH4_3g20180 Fragaria vesca HOM05D003815 ORTHO05D004580 1.0e-96 357.5 229 79.9
CBR_g31446 Chara braunii HOM05D003815 ORTHO05D004580 1.2e-95 354.0 301 59.8
PGSC0003DMG402012419 Solanum tuberosum HOM05D003815 ORTHO05D004580 2.8e-94 349.4 215 82.8
Duzib064G0003 Durio zibethinus HOM05D003815 ORTHO05D004580 1.5e-87 327.0 182 90.1
Cpa.g.sc80.53 Carica papaya HOM05D003815 ORTHO05D004580 3.4e-87 325.9 182 87.4
Duzib064G0004 Durio zibethinus HOM05D003815 ORTHO05D004580 1.3e-78 297.4 174 85.6
PSO017G1411 Papaver somniferum HOM05D003815 ORTHO05D004580 1.1e-77 294.3 193 78.2
Eucgr.F01114 Eucalyptus grandis HOM05D003815 ORTHO05D004580 5.4e-77 292.0 221 72.9
Lj3g0013472 Lotus japonicus HOM05D003815 ORTHO05D004580 2.8e-73 279.6 152 91.4
AagrBONN_evm.TU.Sc2ySwM_340.276 Anthoceros agrestis HOM05D003815 ORTHO05D004580 7.3e-66 255.0 194 66.5
ATR0730G188 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.2e-60 237.7 146 80.1
BcaB07g33367 Brassica carinata HOM05D003815 ORTHO05D004580 1.4e-56 224.2 209 60.8
Pp3c11_23350 Physcomitrium patens HOM05D003815 ORTHO05D004580 1.1e-48 198.0 246 47.2
C07p00250 Brassica napus HOM05D003815 ORTHO05D004580 6.4e-46 188.7 119 74.8
Haze_06417 Corylus avellana HOM05D003815 ORTHO05D004580 2.1e-44 183.7 158 62.7
Haze_06421 Corylus avellana HOM05D003815 ORTHO05D004580 5.1e-43 179.1 136 69.9
Lj8A156T78 Lonicera japonica HOM05D003815 ORTHO05D004580 2.1e-41 173.7 177 59.3
BolC7t40476H Brassica oleracea HOM05D003815 ORTHO05D004580 9.9e-39 164.9 105 75.2
Hma1.2p1_0000F.1_g000160 Hydrangea macrophylla HOM05D003815 ORTHO05D004580 1.3e-35 154.5 86 82.6
BcaC06g36757 Brassica carinata HOM05D003815 ORTHO05D004580 4.8e-33 146.0 96 72.9
MCO07G610 Micromonas commoda HOM05D003815 ORTHO05D004580 4.0e-32 142.9 303 34.0
Actinidia05634 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.7e-30 137.5 82 80.5
Lj3g0015923 Lotus japonicus HOM05D003815 ORTHO05D004580 1.9e-26 124.0 196 42.9
BolC6t36614H Brassica oleracea HOM05D003815 ORTHO05D004580 9.6e-26 121.7 86 70.9
CBR_g29613 Chara braunii HOM05D003815 ORTHO05D004580 1.6e-25 120.9 170 43.5
BcaC08g43686 Brassica carinata HOM05D003815 ORTHO05D004580 1.3e-22 111.3 66 83.3
BolC6t36186H Brassica oleracea HOM05D003815 ORTHO05D004580 1.3e-22 111.3 66 83.3
Oeu044430.1 Olea europaea HOM05D003815 ORTHO05D004580 2.8e-17 93.6 79 60.8
PSO017G7235 Papaver somniferum HOM05D003815 ORTHO05D004580 3.7e-17 93.2 53 79.2
Sopen05g018740 Solanum pennellii HOM05D000002 ORTHO05D000001 4.8e-17 92.8 85 57.6
Sopen05g017440 Solanum pennellii HOM05D003815 ORTHO05D004580 1.4e-16 91.3 158 40.5
Ca_12192_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 7.6e-15 85.5 64 71.9
Ca_30580_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 7.6e-15 85.5 64 71.9
Lj8C156T6 Lonicera japonica HOM05D003815 ORTHO05D004580 8.4e-14 82.0 79 59.5
BolC9t59438H Brassica oleracea HOM05D003815 ORTHO05D004580 7.2e-13 79.0 92 48.9
ATR0730G237 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.3e-11 74.7 64 60.9
C09p66180 Brassica napus HOM05D003815 ORTHO05D004580 5.1e-11 72.8 103 42.7
Oeu026881.1 Olea europaea HOM05D001611 ORTHO05D001464 5.1e-11 72.8 57 59.6
Solyc04g079020.4 Solanum lycopersicum HOM05D003815 ORTHO05D004580 2.5e-10 70.5 110 40.9
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 3.7e-09 66.6 63 58.7
COL.COLO4_31682 Corchorus olitorius HOM05D000007 ORTHO05D000017 4.5e-07 59.7 43 72.1
Actinidia16545 Actinidia chinensis HOM05D003815 ORTHO05D056144 2.9e-06 57.0 42 71.4
Actinidia24031 Actinidia chinensis HOM05D003815 ORTHO05D004580 3.8e-06 56.6 34 76.5
MCO17G054 Micromonas commoda HOM05D003815 ORTHO05D270498 3.8e-06 56.6 67 38.8


User provided reference genes

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