Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu005363.1 Olea europaea HOM05D006576 ORTHO05D008644 4.6e-230 800.8 389 100.0
Migut.C00705 Erythranthe guttata HOM05D006576 ORTHO05D008644 2.0e-188 662.5 378 83.3
MSTRG.25158 Avicennia marina HOM05D006576 ORTHO05D008644 5.0e-184 647.9 378 81.7
SalBow7G4023 Salvia bowleyana HOM05D006576 ORTHO05D008644 1.4e-178 629.8 376 80.1
CSS0029857 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 7.7e-177 624.0 378 79.1
Cc10_g03100 Coffea canephora HOM05D006576 ORTHO05D008644 7.7e-177 624.0 378 76.7
Dinv36060 Davidia involucrata HOM05D006576 ORTHO05D008644 5.0e-176 621.3 374 78.9
Peaxi162Scf00690g00125 Petunia axillaris HOM05D006576 ORTHO05D008644 4.2e-175 618.2 377 78.0
Actinidia15312 Actinidia chinensis HOM05D006576 ORTHO05D008644 1.2e-174 616.7 378 76.7
Lsat_1_v5_gn_1_17900 Lactuca sativa HOM05D006576 ORTHO05D008644 2.0e-172 609.4 379 76.0
SGA_v2.0_scaffold24G10239 Striga asiatica HOM05D006576 ORTHO05D008644 2.0e-172 609.4 381 78.5
COL.COLO4_26345 Corchorus olitorius HOM05D006576 ORTHO05D008644 5.7e-172 607.8 374 75.9
Solyc04g080140.4 Solanum lycopersicum HOM05D006576 ORTHO05D008644 2.2e-171 605.9 377 75.9
Thecc.08G024000 Theobroma cacao HOM05D006576 ORTHO05D008644 2.2e-171 605.9 378 74.1
Nitab4.5_0000110g0470 Nicotiana tabacum HOM05D006576 ORTHO05D008644 3.7e-171 605.1 382 76.2
Nitab4.5_0012039g0010 Nicotiana tabacum HOM05D006576 ORTHO05D008644 1.8e-170 602.8 379 76.3
Rhsim06G0035200 Rhododendron simsii HOM05D006576 ORTHO05D008644 1.8e-170 602.8 384 75.5
Gorai.002G129100 Gossypium raimondii HOM05D006576 ORTHO05D008644 7.0e-170 600.9 384 72.7
Lj4A42T76 Lonicera japonica HOM05D006576 ORTHO05D008644 2.0e-169 599.4 370 77.8
Atru.chr13.516 Acer truncatum HOM05D006576 ORTHO05D008644 2.6e-169 599.0 374 74.9
Lj1g0002309 Lotus japonicus HOM05D006576 ORTHO05D008644 2.6e-169 599.0 378 74.3
Glyma.06G033200 Glycine max HOM05D006576 ORTHO05D008644 3.5e-169 598.6 378 74.3
Lalb_Chr11g0062371 Lupinus albus HOM05D006576 ORTHO05D008644 7.7e-169 597.4 378 74.9
CAN.G1126.39 Capsicum annuum HOM05D006576 ORTHO05D008644 1.0e-168 597.0 372 75.8
arahy.Tifrunner.gnm1.ann1.N2LUF1 Arachis hypogaea HOM05D006576 ORTHO05D008644 1.3e-168 596.7 378 74.1
Gohir.A01G116700 Gossypium hirsutum HOM05D006576 ORTHO05D008644 1.3e-168 596.7 384 72.7
HanXRQChr04g0105541 Helianthus annuus HOM05D006576 ORTHO05D008644 1.7e-168 596.3 377 74.5
ECA247G3618 Erigeron canadensis HOM05D006576 ORTHO05D008644 2.2e-168 595.9 369 75.9
QL02p007885 Quercus lobata HOM05D006576 ORTHO05D008644 2.2e-168 595.9 378 73.5
Hma1.2p1_0203F.1_g086540 Hydrangea macrophylla HOM05D006576 ORTHO05D008644 2.9e-168 595.5 373 73.7
arahy.Tifrunner.gnm1.ann1.G51JN1 Arachis hypogaea HOM05D006576 ORTHO05D008644 5.0e-168 594.7 378 73.8
Gohir.D01G105100 Gossypium hirsutum HOM05D006576 ORTHO05D008644 5.0e-168 594.7 373 73.7
TAR381G1568 Trochodendron aralioides HOM05D006576 ORTHO05D008644 1.5e-167 593.2 379 72.6
MD15G1029800 Malus domestica HOM05D006576 ORTHO05D008644 4.2e-167 591.7 378 72.5
Sopen04g033720 Solanum pennellii HOM05D006576 ORTHO05D008644 4.2e-167 591.7 367 76.0
Hund26593 Selenicereus undatus HOM05D006576 ORTHO05D008644 7.2e-167 590.9 378 72.0
Ciclev10003149m.g Citrus clementina HOM05D006576 ORTHO05D008644 1.6e-166 589.7 378 72.0
Prupe.1G381700 Prunus persica HOM05D006576 ORTHO05D008644 2.1e-166 589.3 378 72.0
FvH4_2g40020 Fragaria vesca HOM05D006576 ORTHO05D008644 8.0e-166 587.4 378 71.7
Phvul.009G056900 Phaseolus vulgaris HOM05D006576 ORTHO05D008644 1.4e-165 586.6 378 73.0
vmacro21626 Vaccinium macrocarpon HOM05D006576 ORTHO05D008644 1.4e-165 586.6 401 71.3
Medtr3g111730 Medicago truncatula HOM05D006576 ORTHO05D008644 1.8e-165 586.3 379 72.8
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 1.8e-165 586.3 373 73.5
RcHm_v2.0_Chr6g0300731 Rosa chinensis HOM05D006576 ORTHO05D008644 2.3e-165 585.9 378 72.0
Ca_15522_v3 Cicer arietinum L. HOM05D006576 ORTHO05D008644 4.0e-165 585.1 378 72.8
DCAR_019521 Daucus carota HOM05D006576 ORTHO05D008644 4.0e-165 585.1 378 75.1
MD08G1033200 Malus domestica HOM05D006576 ORTHO05D008644 4.0e-165 585.1 378 72.0
Psat0s4808g0040 Pisum sativum HOM05D006576 ORTHO05D008644 3.4e-164 582.0 378 72.0
Sed0024937 Sechium edule HOM05D006576 ORTHO05D008644 9.7e-164 580.5 376 70.7
FAN15G1632 Fragaria x ananassa HOM05D006576 ORTHO05D008644 1.3e-163 580.1 385 70.1
Manes.11G048300 Manihot esculenta HOM05D006576 ORTHO05D008644 1.7e-163 579.7 372 73.4
CSS0022363 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 2.8e-163 578.9 451 65.2
MELO3C003867.2 Cucumis melo HOM05D006576 ORTHO05D008644 1.1e-162 577.0 376 70.5
Potri.014G180700 Populus trichocarpa HOM05D006576 ORTHO05D008644 1.1e-162 577.0 381 72.2
CsaV3_3G044990 Cucumis sativus L. HOM05D006576 ORTHO05D008644 1.4e-162 576.6 376 70.5
AUR62033848 Chenopodium quinoa HOM05D006576 ORTHO05D008644 1.8e-162 576.2 378 71.7
FAN27G3021 Fragaria x ananassa HOM05D006576 ORTHO05D008644 1.8e-162 576.2 378 70.9
GSVIVG01009681001 Vitis vinifera HOM05D006576 ORTHO05D008644 2.4e-162 575.9 366 75.1
Cpa.g.sc64.67 Carica papaya HOM05D006576 ORTHO05D008644 4.1e-162 575.1 368 71.7
ClCG05G019150 Citrullus lanatus HOM05D006576 ORTHO05D008644 1.2e-161 573.5 376 70.2
Nn1g05071 Nelumbo nucifera HOM05D006576 ORTHO05D008644 4.5e-161 571.6 380 69.5
Ah.05g167470 Amaranthus hybridus HOM05D006576 ORTHO05D008644 7.7e-161 570.9 377 70.3
EL10Ac1g01831 Beta vulgaris HOM05D006576 ORTHO05D008644 1.7e-160 569.7 373 70.8
Sabra14G0140900 Salix brachista HOM05D006576 ORTHO05D008644 2.2e-160 569.3 375 71.7
PGR083G0445 Punica granatum HOM05D006576 ORTHO05D008644 6.5e-160 567.8 379 71.2
Atru.BG.235.p Acer truncatum HOM05D006576 ORTHO05D008644 1.1e-159 567.0 365 73.7
Haze_17991 Corylus avellana HOM05D006576 ORTHO05D008644 1.6e-158 563.1 472 60.0
Hma1.2p1_0203F.1_g086550 Hydrangea macrophylla HOM05D006576 ORTHO05D008644 2.1e-158 562.8 421 65.1
Sc02g0006340 Simmondsia chinensis HOM05D006576 ORTHO05D008644 2.1e-158 562.8 377 70.8
THA.LOC104822840 Tarenaya hassleriana HOM05D006576 ORTHO05D008644 2.1e-158 562.8 375 72.3
CiPaw.16G055000 Carya illinoinensis HOM05D006576 ORTHO05D008644 5.2e-157 558.1 372 70.4
TWI12G0537 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 1.3e-155 553.5 373 68.1
TWI36G0276 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 1.7e-155 553.1 377 67.6
Aqoxy6G01046 Aquilegia oxysepala HOM05D006576 ORTHO05D008644 3.7e-155 552.0 381 67.5
Eucgr.F01554 Eucalyptus grandis HOM05D006576 ORTHO05D008644 2.3e-152 542.7 383 67.4
A08p06220 Brassica napus HOM05D006576 ORTHO05D008644 2.8e-150 535.8 376 68.1
PSO675G1390 Papaver somniferum HOM05D006576 ORTHO05D008644 4.7e-150 535.0 386 65.5
BraA08t32625Z Brassica rapa HOM05D006576 ORTHO05D008644 8.0e-150 534.3 376 67.8
Sp1g33910 Schrenkiella parvula HOM05D006576 ORTHO05D008644 1.0e-149 533.9 377 67.9
BcaB04g17577 Brassica carinata HOM05D006576 ORTHO05D008644 3.0e-149 532.3 366 68.9
FAN20G0603 Fragaria x ananassa HOM05D006576 ORTHO05D008644 3.0e-149 532.3 378 66.7
Thhalv10011304m.g Eutrema salsugineum HOM05D006576 ORTHO05D008644 8.9e-149 530.8 379 67.3
PSO541G0394 Papaver somniferum HOM05D006576 ORTHO05D008644 2.0e-148 529.6 373 67.0
Carub.0001s3555 Capsella rubella HOM05D006576 ORTHO05D008644 7.5e-148 527.7 365 68.8
Glyma.04G033200 Glycine max HOM05D006576 ORTHO05D008644 3.7e-147 525.4 321 76.0
BcaC07g37274 Brassica carinata HOM05D006576 ORTHO05D008644 1.4e-146 523.5 377 67.4
C08p07030 Brassica napus HOM05D006576 ORTHO05D008644 1.4e-146 523.5 377 67.4
BolC8t47545H Brassica oleracea HOM05D006576 ORTHO05D008644 1.4e-146 523.5 377 67.4
AUR62041679 Chenopodium quinoa HOM05D006576 ORTHO05D008644 1.4e-146 523.5 341 72.1
Os07g0581300 Oryza sativa ssp. japonica HOM05D006576 ORTHO05D008644 9.2e-146 520.8 377 63.9
AT1G45150 Arabidopsis thaliana HOM05D006576 ORTHO05D008644 1.6e-145 520.0 378 66.1
ATR0733G192 Amborella trichopoda HOM05D006576 ORTHO05D008644 4.3e-143 511.9 378 62.7
CANSAT25G2025 Cannabis sativa HOM05D006576 ORTHO05D008644 3.4e-132 475.7 324 69.8
Duzib093G2111 Durio zibethinus HOM05D006576 ORTHO05D008644 9.5e-127 457.6 373 60.1
Zm00001eb107720 Zea mays HOM05D006576 ORTHO05D008644 1.2e-124 450.7 323 65.0
CDE04G1970 Ceratophyllum demersum HOM05D006576 ORTHO05D008644 4.3e-119 432.2 310 65.2
AL1G52790 Arabidopsis lyrata HOM05D006576 ORTHO05D008644 2.1e-118 429.9 287 70.4
Mapoly0015s0075 Marchantia polymorpha HOM05D006576 ORTHO05D008644 2.0e-116 423.3 368 54.3
Pp3c21_15170 Physcomitrium patens HOM05D006576 ORTHO05D008644 1.9e-114 416.8 366 54.1
SMO367G0262 Selaginella moellendorffii HOM05D006576 ORTHO05D008644 5.8e-108 395.2 367 53.4
CBR_g55233 Chara braunii HOM05D006576 ORTHO05D008644 1.3e-70 271.2 260 49.2
unitig_578.g16727 Utricularia gibba HOM05D006576 ORTHO05D008644 1.3e-70 271.2 378 44.7
SHI46795 Sapria himalayana HOM05D006576 ORTHO05D008644 1.7e-67 260.8 245 55.1
CBR_g6514 Chara braunii HOM05D006576 ORTHO05D008644 4.2e-58 229.6 470 33.4
Lsat_1_v5_gn_3_960 Lactuca sativa HOM05D006576 ORTHO05D008644 3.0e-56 223.4 200 56.5
CARHR036240 Cardamine hirsuta HOM05D006576 ORTHO05D008644 1.5e-42 177.9 93 82.8
Zm00001eb352490 Zea mays HOM05D006576 ORTHO05D008499 1.3e-22 111.7 94 60.6
MD05G1053300 Malus domestica HOM05D006576 ORTHO05D248938 1.3e-19 101.7 69 65.2
CBR_g55378 Chara braunii HOM05D006576 ORTHO05D028753 6.6e-19 99.4 95 53.7
Zm00001eb326440 Zea mays HOM05D006576 ORTHO05D028753 6.6e-19 99.4 66 74.2
Zm00001eb361570 Zea mays HOM05D006576 ORTHO05D028753 6.6e-19 99.4 66 74.2
Zm00001eb377960 Zea mays HOM05D006576 ORTHO05D028753 6.6e-19 99.4 66 74.2
Zm00001eb171910 Zea mays HOM05D000538 ORTHO05D003297 3.1e-16 90.5 101 49.5
MBI18_g09633_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 3.7e-14 83.6 42 76.2
MBI18_g23781_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 3.5e-12 77.0 38 81.6
MBI13_g29621_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 6.0e-12 76.3 38 78.9
MBI18_g06878_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 1.3e-11 75.1 38 78.9
Zm00001eb147180 Zea mays HOM05D014217 ORTHO05D000496 1.9e-10 71.2 67 49.3
Zm00001eb413530 Zea mays HOM05D014217 ORTHO05D000496 2.1e-09 67.8 64 48.4
AL4G26800 Arabidopsis lyrata HOM05D006576 ORTHO05D008644 3.7e-06 57.0 33 75.8


User provided reference genes

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