Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu005324.1 Olea europaea HOM05D006369 ORTHO05D007764 8.0e-208 726.9 371 100.0
MSTRG.8579 Avicennia marina HOM05D006369 ORTHO05D007764 5.3e-58 229.2 166 72.9
Dinv29169 Davidia involucrata HOM05D006369 ORTHO05D007764 4.2e-55 219.5 167 70.7
Migut.F00102 Erythranthe guttata HOM05D006369 ORTHO05D007764 1.0e-53 214.9 169 70.4
Manes.08G163800 Manihot esculenta HOM05D006369 ORTHO05D007764 1.8e-53 214.2 167 70.1
SalBow4G3280 Salvia bowleyana HOM05D006369 ORTHO05D007764 3.0e-53 213.4 170 68.2
Cc02_g00390 Coffea canephora HOM05D006369 ORTHO05D007764 1.3e-51 208.0 169 66.9
Nitab4.5_0000001g0150 Nicotiana tabacum HOM05D006369 ORTHO05D007764 8.1e-51 205.3 168 67.9
CiPaw.05G237500 Carya illinoinensis HOM05D006369 ORTHO05D007764 2.4e-50 203.8 167 64.1
Nitab4.5_0000820g0010 Nicotiana tabacum HOM05D006369 ORTHO05D007764 2.6e-49 200.3 169 68.0
Potri.019G052400 Populus trichocarpa HOM05D006369 ORTHO05D007764 9.9e-49 198.4 167 64.7
CsaV3_4G008720 Cucumis sativus L. HOM05D006369 ORTHO05D007764 2.9e-48 196.8 167 65.9
RcHm_v2.0_Chr1g0383921 Rosa chinensis HOM05D006369 ORTHO05D007764 2.9e-48 196.8 167 62.3
SGA_v2.0_scaffold18G08505 Striga asiatica HOM05D006369 ORTHO05D007764 2.9e-48 196.8 168 64.9
Ciclev10021854m.g Citrus clementina HOM05D006369 ORTHO05D007764 4.9e-48 196.1 167 63.5
MD07G1306400 Malus domestica HOM05D006369 ORTHO05D007764 1.4e-47 194.5 168 64.3
TAR365G0740 Trochodendron aralioides HOM05D006369 ORTHO05D007764 2.4e-47 193.7 167 62.9
CAN.G317.12 Capsicum annuum HOM05D006369 ORTHO05D007764 7.1e-47 192.2 168 66.1
Haze_00598 Corylus avellana HOM05D006369 ORTHO05D007764 7.1e-47 192.2 171 64.9
Prupe.2G324400 Prunus persica HOM05D006369 ORTHO05D007764 9.3e-47 191.8 167 62.3
Lj1A1033G61 Lonicera japonica HOM05D006369 ORTHO05D007764 1.2e-46 191.4 172 66.9
Thecc.03G000800 Theobroma cacao HOM05D006369 ORTHO05D007764 2.7e-46 190.3 166 65.1
FvH4_7g33790 Fragaria vesca HOM05D006369 ORTHO05D007764 6.0e-46 189.1 167 61.1
FAN01G2653 Fragaria x ananassa HOM05D006369 ORTHO05D007764 6.0e-46 189.1 167 61.1
MELO3C024871.2 Cucumis melo HOM05D006369 ORTHO05D007764 7.9e-46 188.7 168 64.3
ClCG10G009050 Citrullus lanatus HOM05D006369 ORTHO05D007764 1.3e-45 188.0 166 64.5
FAN10G1961 Fragaria x ananassa HOM05D006369 ORTHO05D007764 2.3e-45 187.2 167 60.5
FAN10G2535 Fragaria x ananassa HOM05D006369 ORTHO05D007764 2.3e-45 187.2 167 60.5
Cfa015892 Carpinus fangiana HOM05D006369 ORTHO05D007764 3.9e-45 186.4 172 62.8
CiPaw.06G019700 Carya illinoinensis HOM05D006369 ORTHO05D007764 8.7e-45 185.3 167 59.9
MD01G1234200 Malus domestica HOM05D006369 ORTHO05D007764 8.7e-45 185.3 171 61.4
FAN03G1142 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.9e-44 184.1 167 59.9
FAN03G2967 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.9e-44 184.1 167 59.9
Solyc03g062680.3 Solanum lycopersicum HOM05D006369 ORTHO05D007764 2.5e-44 183.7 171 67.3
Atru.chr7.1119 Acer truncatum HOM05D006369 ORTHO05D007764 3.3e-44 183.3 170 62.4
Sopen03g015000 Solanum pennellii HOM05D006369 ORTHO05D007764 1.6e-43 181.0 171 67.3
CANSAT21G0373 Cannabis sativa HOM05D006369 ORTHO05D007764 4.8e-43 179.5 172 58.1
Actinidia00694 Actinidia chinensis HOM05D006369 ORTHO05D007764 8.1e-43 178.7 169 62.7
Lalb_Chr19g0139881 Lupinus albus HOM05D006369 ORTHO05D007764 3.1e-42 176.8 167 57.5
THA.LOC104820876 Tarenaya hassleriana HOM05D006369 ORTHO05D007764 5.3e-42 176.0 167 61.7
Hund18049 Selenicereus undatus HOM05D006369 ORTHO05D007764 1.2e-41 174.9 174 58.6
CARHR196110 Cardamine hirsuta HOM05D006369 ORTHO05D007764 2.6e-41 173.7 163 62.0
Sp6g27090 Schrenkiella parvula HOM05D006369 ORTHO05D007764 3.4e-41 173.3 181 56.4
BcaC03g18532 Brassica carinata HOM05D006369 ORTHO05D007764 4.5e-41 172.9 155 63.2
BcaNung00427 Brassica carinata HOM05D006369 ORTHO05D007764 4.5e-41 172.9 166 61.4
A02p03940 Brassica napus HOM05D006369 ORTHO05D007764 4.5e-41 172.9 169 60.4
C02p08760 Brassica napus HOM05D006369 ORTHO05D007764 4.5e-41 172.9 155 63.2
BolC2t06790H Brassica oleracea HOM05D006369 ORTHO05D007764 4.5e-41 172.9 155 63.2
Gorai.001G204600 Gossypium raimondii HOM05D006369 ORTHO05D007764 4.5e-41 172.9 165 63.0
CSS0035893 Camellia sinensis var. sinensis HOM05D006369 ORTHO05D007764 5.8e-41 172.6 184 55.4
Ca_04928_v3 Cicer arietinum L. HOM05D006369 ORTHO05D007764 1.0e-40 171.8 170 55.3
Duzib211G0044 Durio zibethinus HOM05D006369 ORTHO05D007764 1.0e-40 171.8 165 60.0
Gohir.A07G176900 Gossypium hirsutum HOM05D006369 ORTHO05D007764 1.3e-40 171.4 166 63.3
VMungo1127G0993 Vigna mungo HOM05D006369 ORTHO05D007764 1.7e-40 171.0 176 57.4
arahy.Tifrunner.gnm1.ann1.WFP97B Arachis hypogaea HOM05D006369 ORTHO05D007764 2.2e-40 170.6 167 59.9
Thhalv10014449m.g Eutrema salsugineum HOM05D006369 ORTHO05D007764 2.2e-40 170.6 187 55.6
Psat7g171520 Pisum sativum HOM05D006369 ORTHO05D007764 2.2e-40 170.6 172 57.0
Phvul.011G021200 Phaseolus vulgaris HOM05D006369 ORTHO05D007764 2.9e-40 170.2 164 59.8
Gohir.D07G184401 Gossypium hirsutum HOM05D006369 ORTHO05D007764 6.5e-40 169.1 166 63.3
Peaxi162Scf00076g00928 Petunia axillaris HOM05D006369 ORTHO05D007764 8.4e-40 168.7 244 46.3
BraA02t05358Z Brassica rapa HOM05D006369 ORTHO05D007764 1.1e-39 168.3 170 60.0
Glyma.11G092500 Glycine max HOM05D006369 ORTHO05D007764 1.9e-39 167.5 172 57.0
EL10Ac7g17391 Beta vulgaris HOM05D006369 ORTHO05D007764 3.2e-39 166.8 178 56.2
PGR042G2784 Punica granatum HOM05D006369 ORTHO05D007764 7.1e-39 165.6 167 58.1
Sed0025457 Sechium edule HOM05D006369 ORTHO05D007764 7.1e-39 165.6 170 60.0
Carub.0006s1525 Capsella rubella HOM05D006369 ORTHO05D007764 2.1e-38 164.1 169 59.2
Nn3g21321 Nelumbo nucifera HOM05D006369 ORTHO05D007764 4.6e-38 162.9 184 56.0
AL6G28090 Arabidopsis lyrata HOM05D006369 ORTHO05D007764 6.0e-38 162.5 182 54.4
arahy.Tifrunner.gnm1.ann1.F9R2PF Arachis hypogaea HOM05D006369 ORTHO05D007764 6.0e-38 162.5 182 55.5
vmacro02505 Vaccinium macrocarpon HOM05D006369 ORTHO05D007764 6.0e-38 162.5 169 56.2
Eucgr.A02962 Eucalyptus grandis HOM05D006369 ORTHO05D007764 1.0e-37 161.8 168 57.1
BcaB01g04960 Brassica carinata HOM05D006369 ORTHO05D007764 1.3e-37 161.4 157 62.4
Aqoxy2G03109 Aquilegia oxysepala HOM05D006369 ORTHO05D007764 5.1e-37 159.5 169 55.0
Glyma.12G018800 Glycine max HOM05D006369 ORTHO05D007764 5.1e-37 159.5 167 57.5
GSVIVG01024423001 Vitis vinifera HOM05D006369 ORTHO05D007764 1.1e-36 158.3 141 63.1
AT5G17070 Arabidopsis thaliana HOM05D006369 ORTHO05D007764 5.7e-36 156.0 175 54.3
Medtr4g077610 Medicago truncatula HOM05D006369 ORTHO05D007764 5.7e-36 156.0 142 58.5
HanXRQChr17g0541681 Helianthus annuus HOM05D006369 ORTHO05D007764 2.8e-35 153.7 176 54.0
Ah.08g212670 Amaranthus hybridus HOM05D006369 ORTHO05D007764 4.8e-35 152.9 171 56.1
PSO170G0520 Papaver somniferum HOM05D006369 ORTHO05D007764 4.8e-35 152.9 172 54.7
Sc05g0004440 Simmondsia chinensis HOM05D006369 ORTHO05D007764 4.8e-35 152.9 140 62.1
TPR.G39567 Trifolium pratense HOM05D006369 ORTHO05D007764 4.8e-35 152.9 176 51.1
PSO210G6912 Papaver somniferum HOM05D006369 ORTHO05D007764 6.3e-35 152.5 172 54.7
ECA246G2850 Erigeron canadensis HOM05D006369 ORTHO05D007764 8.2e-35 152.1 165 54.5
Lsat_1_v5_gn_3_37940 Lactuca sativa HOM05D006369 ORTHO05D007764 2.4e-34 150.6 187 52.9
Aa31LG11G12610 Aethionema arabicum HOM05D006369 ORTHO05D007764 4.1e-34 149.8 174 55.2
MBI06_g08525_MAGBIO Magnolia biondii HOM05D006369 ORTHO05D007764 1.2e-33 148.3 148 58.8
unitig_747.g21708 Utricularia gibba HOM05D006369 ORTHO05D007764 1.3e-32 144.8 205 48.3
Lj3g0017971 Lotus japonicus HOM05D006369 ORTHO05D007764 2.2e-32 144.1 191 48.7
Psat1g047200 Pisum sativum HOM05D006369 ORTHO05D007764 5.0e-32 142.9 115 64.3
Psat1g047280 Pisum sativum HOM05D006369 ORTHO05D007764 4.2e-31 139.8 115 63.5
Psat1g047240 Pisum sativum HOM05D006369 ORTHO05D007764 1.2e-30 138.3 115 61.7
DCAR_020401 Daucus carota HOM05D006369 ORTHO05D007764 9.7e-28 128.6 174 50.6
ATR0213G006 Amborella trichopoda HOM05D006369 ORTHO05D007764 1.4e-23 114.8 159 47.2
Rhsim13G0016700 Rhododendron simsii HOM05D006369 ORTHO05D007764 4.2e-23 113.2 244 36.9
Os06g0300700 Oryza sativa ssp. japonica HOM05D006369 ORTHO05D007764 9.4e-23 112.1 190 43.2
CDE02G3455 Ceratophyllum demersum HOM05D006369 ORTHO05D007764 2.7e-22 110.5 169 43.8
Zm00001eb381130 Zea mays HOM05D006369 ORTHO05D007764 4.6e-22 109.8 162 46.9
Hma1.2p1_1235F.1_g269100 Hydrangea macrophylla HOM05D006369 ORTHO05D007764 6.1e-22 109.4 141 49.6
HPP92_026820 Vanilla planifolia HOM05D006369 ORTHO05D007764 6.1e-22 109.4 166 47.0
SEGI_01011 Sequoiadendron giganteum HOM05D006369 ORTHO05D007764 3.9e-21 106.7 127 50.4
BraA03t10137Z Brassica rapa HOM05D006369 ORTHO05D007764 6.7e-21 105.9 139 50.4
COL.COLO4_13442 Corchorus olitorius HOM05D006369 ORTHO05D007764 1.5e-20 104.8 185 42.7
AagrBONN_evm.TU.Sc2ySwM_344.1770 Anthoceros agrestis HOM05D006369 ORTHO05D007764 7.2e-15 85.9 97 49.5
Sabra19G0056300 Salix brachista HOM05D006369 ORTHO05D007764 1.8e-13 81.3 90 56.7
C03p09390 Brassica napus HOM05D006369 ORTHO05D007764 5.2e-13 79.7 109 50.5
BolC3t13440H Brassica oleracea HOM05D006369 ORTHO05D007764 5.2e-13 79.7 112 52.7
Cpa.g.sc39.77 Carica papaya HOM05D006369 ORTHO05D007764 6.7e-13 79.3 50 68.0
BcaB01g05232 Brassica carinata HOM05D006369 ORTHO05D007764 8.8e-13 79.0 109 50.5
CBR_g17900 Chara braunii HOM05D006369 ORTHO05D007764 9.7e-12 75.5 115 41.7
Sabra19G0056200 Salix brachista HOM05D006369 ORTHO05D007764 6.3e-11 72.8 49 75.5
Pp3c20_5600 Physcomitrium patens HOM05D006369 ORTHO05D007764 2.4e-10 70.9 199 31.2
PGSC0003DMG401008641 Solanum tuberosum HOM05D006369 ORTHO05D007764 5.3e-10 69.7 92 54.3
Mapoly0084s0069 Marchantia polymorpha HOM05D006369 ORTHO05D007764 2.6e-09 67.4 158 37.3
A03p08120 Brassica napus HOM05D006369 ORTHO05D007764 1.0e-08 65.5 155 37.4
SMO141G0301 Selaginella moellendorffii HOM05D006369 ORTHO05D007764 4.2e-07 60.1 87 46.0
Dinv06133 Davidia involucrata HOM05D006369 ORTHO05D007764 8.0e-06 55.8 36 77.8


User provided reference genes

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