Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu005191.1 Olea europaea HOM05D004264 ORTHO05D004680 1.0e-27 125.9 60 100.0
Cc05_g01720 Coffea canephora HOM05D004264 ORTHO05D004680 1.6e-20 102.1 58 79.3
COL.COLO4_14480 Corchorus olitorius HOM05D004264 ORTHO05D004680 7.8e-20 99.8 58 74.1
Dinv08428 Davidia involucrata HOM05D004264 ORTHO05D008966 1.3e-19 99.0 57 80.7
ClCG04G006790 Citrullus lanatus HOM05D004264 ORTHO05D004680 2.3e-19 98.2 58 72.4
CsaV3_4G026470 Cucumis sativus L. HOM05D004264 ORTHO05D004680 3.0e-19 97.8 58 70.7
Manes.09G110101 Manihot esculenta HOM05D004264 ORTHO05D004680 3.9e-19 97.4 57 77.2
TWI74G1571 Tripterygium wilfordii HOM05D004264 ORTHO05D004680 5.0e-19 97.1 57 75.4
Haze_21060 Corylus avellana HOM05D004264 ORTHO05D004680 6.6e-19 96.7 58 74.1
Potri.016G122350 Populus trichocarpa HOM05D004264 ORTHO05D004680 6.6e-19 96.7 56 78.6
Thecc.05G009200 Theobroma cacao HOM05D004264 ORTHO05D004680 6.6e-19 96.7 58 74.1
Hma1.2p1_0479F.1_g161540 Hydrangea macrophylla HOM05D004264 ORTHO05D004680 1.1e-18 95.9 57 77.2
Duzib093G0558 Durio zibethinus HOM05D004264 ORTHO05D004680 1.5e-18 95.5 59 72.9
Gohir.A01G229100 Gossypium hirsutum HOM05D004264 ORTHO05D004680 1.9e-18 95.1 58 69.0
Gohir.D01G219000 Gossypium hirsutum HOM05D004264 ORTHO05D004680 1.9e-18 95.1 58 69.0
Gorai.002G265700 Gossypium raimondii HOM05D004264 ORTHO05D004680 1.9e-18 95.1 58 69.0
Solyc04g072210.4 Solanum lycopersicum HOM05D004264 ORTHO05D004680 1.9e-18 95.1 58 74.1
Cfa017136 Carpinus fangiana HOM05D004264 ORTHO05D004680 2.5e-18 94.7 58 72.4
Actinidia29078 Actinidia chinensis HOM05D004264 ORTHO05D004680 3.3e-18 94.4 60 70.0
FAN05G1725 Fragaria x ananassa HOM05D004264 ORTHO05D004680 3.3e-18 94.4 56 75.0
FAN05G1746 Fragaria x ananassa HOM05D004264 ORTHO05D004680 3.3e-18 94.4 56 75.0
FAN05G3264 Fragaria x ananassa HOM05D004264 ORTHO05D004680 3.3e-18 94.4 56 75.0
RcHm_v2.0_Chr3g0462171 Rosa chinensis HOM05D004264 ORTHO05D004680 3.3e-18 94.4 56 75.0
FvH4_6g10921 Fragaria vesca HOM05D004264 ORTHO05D004680 4.3e-18 94.0 56 75.0
Potri.012G107200 Populus trichocarpa HOM05D004264 ORTHO05D004680 7.3e-18 93.2 56 75.0
PGSC0003DMG400031135 Solanum tuberosum HOM05D004264 ORTHO05D004680 7.3e-18 93.2 58 72.4
CANSAT35G1133 Cannabis sativa HOM05D004264 ORTHO05D004680 1.2e-17 92.4 58 72.4
CiPaw.09G213400 Carya illinoinensis HOM05D004264 ORTHO05D004680 1.2e-17 92.4 57 71.9
FAN02G3507 Fragaria x ananassa HOM05D004264 ORTHO05D004680 1.2e-17 92.4 56 73.2
FAN09G4226 Fragaria x ananassa HOM05D004264 ORTHO05D004680 1.2e-17 92.4 56 73.2
Actinidia11558 Actinidia chinensis HOM05D004264 ORTHO05D004680 1.6e-17 92.0 57 70.2
Carub.0003s0799 Capsella rubella HOM05D004264 ORTHO05D004680 1.6e-17 92.0 57 64.9
AT3G08880 Arabidopsis thaliana HOM05D004264 ORTHO05D004680 2.1e-17 91.7 57 64.9
AUR62030782 Chenopodium quinoa HOM05D004264 ORTHO05D004680 2.8e-17 91.3 57 71.9
Rhsim05G0223700 Rhododendron simsii HOM05D004264 ORTHO05D004680 3.6e-17 90.9 57 70.2
BcaC09g47997 Brassica carinata HOM05D004264 ORTHO05D004680 8.1e-17 89.7 57 63.2
DCAR_015367 Daucus carota HOM05D004264 ORTHO05D004680 8.1e-17 89.7 58 67.2
Glyma.07G154451 Glycine max HOM05D004264 ORTHO05D004680 8.1e-17 89.7 60 66.7
Duzib106G1969 Durio zibethinus HOM05D004264 ORTHO05D004680 1.1e-16 89.4 58 65.5
Peaxi162Scf00522g00315 Petunia axillaris HOM05D004264 ORTHO05D004680 1.1e-16 89.4 58 69.0
Thhalv10021618m.g Eutrema salsugineum HOM05D004264 ORTHO05D004680 1.4e-16 89.0 57 63.2
VMungo1383G0682 Vigna mungo HOM05D004264 ORTHO05D004680 1.4e-16 89.0 60 65.0
Carub.0006s0026 Capsella rubella HOM05D004264 ORTHO05D004680 1.8e-16 88.6 57 63.2
Glyma.18G205200 Glycine max HOM05D004264 ORTHO05D004680 1.8e-16 88.6 60 65.0
MD04G1163700 Malus domestica HOM05D004264 ORTHO05D004680 1.8e-16 88.6 59 69.5
MD12G1177600 Malus domestica HOM05D004264 ORTHO05D004680 1.8e-16 88.6 59 67.8
THA.LOC104816187 Tarenaya hassleriana HOM05D004264 ORTHO05D004680 1.8e-16 88.6 55 67.3
Sp3g07270 Schrenkiella parvula HOM05D004264 ORTHO05D004680 2.3e-16 88.2 57 63.2
VMungo1215G3396 Vigna mungo HOM05D004264 ORTHO05D004680 2.3e-16 88.2 60 63.3
TAR623G1256 Trochodendron aralioides HOM05D004264 ORTHO05D004680 3.1e-16 87.8 57 66.7
AL6G10480 Arabidopsis lyrata HOM05D004264 ORTHO05D004680 4.0e-16 87.4 57 66.7
Sabra16G0118000 Salix brachista HOM05D004264 ORTHO05D004680 4.0e-16 87.4 51 78.4
AL3G19870 Arabidopsis lyrata HOM05D004264 ORTHO05D004680 5.2e-16 87.0 57 61.4
Lj3g0014192 Lotus japonicus HOM05D004264 ORTHO05D004680 5.2e-16 87.0 60 63.3
Atru.chr8.2305 Acer truncatum HOM05D004264 ORTHO05D004680 6.8e-16 86.7 59 64.4
BcaC09g48040 Brassica carinata HOM05D004264 ORTHO05D004680 6.8e-16 86.7 56 62.5
BNapus_Darmor_BZH_scaffold_167p00190 Brassica napus HOM05D004264 ORTHO05D004680 6.8e-16 86.7 56 62.5
AUR62030512 Chenopodium quinoa HOM05D004264 ORTHO05D004680 6.8e-16 86.7 57 70.2
BraA01t04327Z Brassica rapa HOM05D004264 ORTHO05D004680 8.9e-16 86.3 56 62.5
Ca_07679_v3 Cicer arietinum L. HOM05D004264 ORTHO05D004680 8.9e-16 86.3 60 61.7
EL10Ac5g12510 Beta vulgaris HOM05D004264 ORTHO05D004680 1.2e-15 85.9 59 67.8
Oeu041877.1 Olea europaea HOM05D004264 ORTHO05D004680 1.5e-15 85.5 53 75.5
Oeu041878.1 Olea europaea HOM05D004264 ORTHO05D004680 1.5e-15 85.5 53 75.5
CARHR083200 Cardamine hirsuta HOM05D004264 ORTHO05D004680 2.0e-15 85.1 59 59.3
DCAR_018675 Daucus carota HOM05D004264 ORTHO05D004680 2.6e-15 84.7 59 66.1
Sed0006342 Sechium edule HOM05D004264 ORTHO05D004680 3.4e-15 84.3 58 63.8
VMungo1383G0816 Vigna mungo HOM05D004264 ORTHO05D004680 3.4e-15 84.3 57 63.2
Medtr1g100900 Medicago truncatula HOM05D004264 ORTHO05D004680 5.8e-15 83.6 60 61.7
TPR.G1155 Trifolium pratense HOM05D004264 ORTHO05D004680 5.8e-15 83.6 60 61.7
Phvul.008G094300 Phaseolus vulgaris HOM05D004264 ORTHO05D004680 7.5e-15 83.2 60 61.7
Migut.J00116 Erythranthe guttata HOM05D004264 ORTHO05D004680 1.7e-14 82.0 58 69.0
ECA233G6002 Erigeron canadensis HOM05D004264 ORTHO05D004680 2.9e-14 81.3 57 64.9
MBI10_g27417_MAGBIO Magnolia biondii HOM05D004264 ORTHO05D004680 2.9e-14 81.3 57 64.9
arahy.Tifrunner.gnm1.ann1.IC5F1T Arachis hypogaea HOM05D004264 ORTHO05D004680 3.7e-14 80.9 57 59.6
Hund14916 Selenicereus undatus HOM05D004264 ORTHO05D004680 3.7e-14 80.9 57 64.9
THA.LOC104827057 Tarenaya hassleriana HOM05D004264 ORTHO05D004680 3.7e-14 80.9 57 61.4
HanXRQChr13g0390251 Helianthus annuus HOM05D004264 ORTHO05D004680 4.9e-14 80.5 58 62.1
PSO339G3729 Papaver somniferum HOM05D004264 ORTHO05D004680 4.9e-14 80.5 60 63.3
Nn8g40771 Nelumbo nucifera HOM05D004264 ORTHO05D004680 6.4e-14 80.1 55 63.6
Lsat_1_v5_gn_6_104820 Lactuca sativa HOM05D004264 ORTHO05D004680 8.3e-14 79.7 61 62.3
PSO801G0087 Papaver somniferum HOM05D004264 ORTHO05D004680 8.3e-14 79.7 60 63.3
HanXRQChr02g0036821 Helianthus annuus HOM05D004264 ORTHO05D004680 1.1e-13 79.3 55 61.8
PGR004G2045 Punica granatum HOM05D004264 ORTHO05D004680 1.1e-13 79.3 58 62.1
arahy.Tifrunner.gnm1.ann1.G0I7HS Arachis hypogaea HOM05D004264 ORTHO05D004680 1.4e-13 79.0 57 57.9
Lalb_Chr01g0023271 Lupinus albus HOM05D004264 ORTHO05D004680 3.2e-13 77.8 60 56.7
Aqoxy3G03064 Aquilegia oxysepala HOM05D004264 ORTHO05D004680 7.1e-13 76.6 56 55.4
Psat3g124240 Pisum sativum HOM05D004264 ORTHO05D004680 7.1e-13 76.6 60 56.7
unitig_0.g2545 Utricularia gibba HOM05D004264 ORTHO05D004680 9.2e-13 76.3 58 53.4
SEGI_36861 Sequoiadendron giganteum HOM05D004264 ORTHO05D004680 3.0e-11 71.2 59 50.8
BcaB04g18563 Brassica carinata HOM05D004264 ORTHO05D004680 3.9e-11 70.9 59 55.9
SEGI_24150 Sequoiadendron giganteum HOM05D004264 ORTHO05D004680 3.9e-11 70.9 59 50.8
C03p43950 Brassica napus HOM05D004264 ORTHO05D004680 1.1e-10 69.3 59 55.9
CSS0010779 Camellia sinensis var. sinensis HOM05D004264 ORTHO05D004680 1.5e-10 68.9 40 85.0
Ah.12g058940 Amaranthus hybridus HOM05D004264 ORTHO05D004680 1.9e-10 68.6 55 56.4
AT5G01570 Arabidopsis thaliana HOM05D004264 ORTHO05D004680 3.6e-09 64.3 55 54.5
Os04g0445400 Oryza sativa ssp. japonica HOM05D004264 ORTHO05D004680 3.6e-09 64.3 55 52.7
MBI03_g10315_MAGBIO Magnolia biondii HOM05D004264 ORTHO05D004680 4.7e-09 63.9 55 61.8
Zm00001eb068100 Zea mays HOM05D004264 ORTHO05D004680 4.7e-09 63.9 56 55.4
A03p65190 Brassica napus HOM05D024600 ORTHO05D004680 1.4e-08 62.4 58 55.2
A05p35220 Brassica napus HOM05D024600 ORTHO05D004680 2.9e-06 54.7 57 50.9
C09p21930 Brassica napus HOM05D024600 ORTHO05D004680 3.7e-06 54.3 57 50.9
A03p36320 Brassica napus HOM05D024600 ORTHO05D004680 4.9e-06 53.9 63 42.9


User provided reference genes

Program Settings