Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu005148.1 Olea europaea HOM05D001705 ORTHO05D002725 2.0e-85 320.9 548 100.0
MSTRG.2503 Avicennia marina HOM05D001705 ORTHO05D002725 3.5e-42 177.2 546 83.3
PGSC0003DMG400003544 Solanum tuberosum HOM05D001705 ORTHO05D002725 1.3e-41 175.3 546 85.9
CAN.G358.8 Capsicum annuum HOM05D001705 ORTHO05D002725 2.5e-40 171.0 546 85.9
Sopen02g029270 Solanum pennellii HOM05D001705 ORTHO05D002725 2.3e-38 164.5 546 85.3
Prupe.7G164400 Prunus persica HOM05D001705 ORTHO05D002725 5.2e-38 163.3 546 82.4
Peaxi162Scf00083g01720 Petunia axillaris HOM05D001705 ORTHO05D002725 5.8e-37 159.8 257 81.7
Cfa006934 Carpinus fangiana HOM05D001705 ORTHO05D002725 9.9e-37 159.1 546 77.5
Nitab4.5_0004086g0010 Nicotiana tabacum HOM05D001705 ORTHO05D002725 9.9e-37 159.1 546 84.4
Nitab4.5_0002266g0090 Nicotiana tabacum HOM05D001705 ORTHO05D002725 1.7e-36 158.3 546 82.6
Potri.007G016700 Populus trichocarpa HOM05D001705 ORTHO05D002725 3.8e-36 157.1 548 82.8
Sabra05G0096800 Salix brachista HOM05D001705 ORTHO05D002725 4.9e-36 156.8 259 77.6
Migut.H02487 Erythranthe guttata HOM05D001705 ORTHO05D002725 8.4e-36 156.0 546 81.1
CiPaw.07G055300 Carya illinoinensis HOM05D001705 ORTHO05D002725 1.4e-35 155.2 546 81.3
GSVIVG01018835001 Vitis vinifera HOM05D001705 ORTHO05D002725 9.2e-35 152.5 257 77.4
Rhsim08G0036100 Rhododendron simsii HOM05D001705 ORTHO05D002725 3.9e-33 147.1 255 71.0
Gohir.A12G061400 Gossypium hirsutum HOM05D001705 ORTHO05D002725 8.6e-33 146.0 256 72.7
Nn5g29193 Nelumbo nucifera HOM05D001705 ORTHO05D002725 8.6e-33 146.0 546 80.8
Thecc.01G024300 Theobroma cacao HOM05D001705 ORTHO05D002725 8.6e-33 146.0 257 78.2
TAR628G0632 Trochodendron aralioides HOM05D001705 ORTHO05D002725 1.5e-32 145.2 545 82.2
CSS0005183 Camellia sinensis var. sinensis HOM05D001705 ORTHO05D002725 2.5e-32 144.4 257 78.6
Cc07_g10340 Coffea canephora HOM05D001705 ORTHO05D002725 2.5e-32 144.4 546 81.7
Gorai.008G064700 Gossypium raimondii HOM05D001705 ORTHO05D002725 2.5e-32 144.4 256 72.7
Gohir.D12G061500 Gossypium hirsutum HOM05D001705 ORTHO05D002725 3.3e-32 144.1 256 72.7
Potri.005G117700 Populus trichocarpa HOM05D001705 ORTHO05D002725 3.3e-32 144.1 548 82.3
Sabra07G0013900 Salix brachista HOM05D001705 ORTHO05D002725 5.6e-32 143.3 548 81.2
Duzib147G0685 Durio zibethinus HOM05D001705 ORTHO05D002725 7.3e-32 142.9 257 77.0
FvH4_1g12240 Fragaria vesca HOM05D001705 ORTHO05D002725 2.1e-31 141.4 546 74.2
MD02G1136300 Malus domestica HOM05D004495 ORTHO05D005361 1.1e-30 139.0 548 78.3
EL10Ac6g14594 Beta vulgaris HOM05D001705 ORTHO05D002725 2.4e-30 137.9 256 78.1
Haze_03816 Corylus avellana HOM05D001705 ORTHO05D002725 3.1e-30 137.5 546 82.6
FAN19G2547 Fragaria x ananassa HOM05D004495 ORTHO05D005361 6.9e-30 136.3 546 73.8
Peaxi162Scf00083g01719 Petunia axillaris HOM05D001705 ORTHO05D002725 8.9e-30 136.0 257 76.3
Manes.01G142200 Manihot esculenta HOM05D001705 ORTHO05D002725 2.0e-29 134.8 255 78.0
COL.COLO4_21972 Corchorus olitorius HOM05D001705 ORTHO05D002725 2.6e-29 134.4 256 78.1
VMungo0251G2871 Vigna mungo HOM05D001705 ORTHO05D002725 2.6e-29 134.4 256 67.6
Phvul.003G258800 Phaseolus vulgaris HOM05D001705 ORTHO05D002725 7.6e-29 132.9 256 65.2
EL10As8g23862 Beta vulgaris HOM05D001705 ORTHO05D002725 2.2e-28 131.3 256 66.4
vmacro22099 Vaccinium macrocarpon HOM05D001705 ORTHO05D002725 2.2e-28 131.3 546 78.8
Solyc02g084600.4 Solanum lycopersicum HOM05D001705 ORTHO05D002725 4.9e-28 130.2 201 63.7
Cpa.g.sc6.205 Carica papaya HOM05D001705 ORTHO05D002725 1.9e-27 128.3 257 77.8
Aqoxy6G02406 Aquilegia oxysepala HOM05D001705 ORTHO05D002725 2.4e-27 127.9 542 79.9
ClCG01G020070 Citrullus lanatus HOM05D001705 ORTHO05D002725 3.9e-25 120.6 546 73.1
Eucgr.I02373 Eucalyptus grandis HOM05D001705 ORTHO05D002725 6.6e-25 119.8 257 73.9
FAN28G1436 Fragaria x ananassa HOM05D001705 ORTHO05D002725 6.6e-25 119.8 546 71.6
Glyma.16G131500 Glycine max HOM05D001705 ORTHO05D002725 1.1e-24 119.0 256 73.4
Sed0016929 Sechium edule HOM05D001705 ORTHO05D002725 1.9e-24 118.2 546 79.1
CsaV3_6G046840 Cucumis sativus L. HOM05D001705 ORTHO05D002725 2.5e-24 117.9 546 79.9
TWI09G1571 Tripterygium wilfordii HOM05D001705 ORTHO05D002725 7.3e-24 116.3 256 55.9
FAN23G3072 Fragaria x ananassa HOM05D004495 ORTHO05D005361 2.8e-23 114.4 546 72.2
Ah.02g124770 Amaranthus hybridus HOM05D001705 ORTHO05D002725 1.1e-22 112.5 256 52.0
AUR62007790 Chenopodium quinoa HOM05D001705 ORTHO05D002725 1.1e-22 112.5 258 60.9
AUR62002982 Chenopodium quinoa HOM05D000312 ORTHO05D002725 3.1e-22 110.9 254 53.9
Dinv40050 Davidia involucrata HOM05D001705 ORTHO05D002725 6.9e-22 109.8 160 70.6
MELO3C007881.2 Cucumis melo HOM05D001705 ORTHO05D002725 9.0e-22 109.4 546 77.5
RcHm_v2.0_Chr2g0100021 Rosa chinensis HOM05D001705 ORTHO05D002725 9.0e-22 109.4 544 70.8
PSO675G6176 Papaver somniferum HOM05D001705 ORTHO05D002725 2.0e-21 108.2 256 72.3
SalBow8G3503 Salvia bowleyana HOM05D001705 ORTHO05D002725 2.0e-21 108.2 255 72.9
Hund14023 Selenicereus undatus HOM05D001705 ORTHO05D002725 3.4e-21 107.5 259 71.4
Sc07g0007330 Simmondsia chinensis HOM05D001705 ORTHO05D002725 4.5e-21 107.1 254 51.2
SGA_v2.0_scaffold2G01238 Striga asiatica HOM05D001705 ORTHO05D002725 9.9e-21 105.9 256 67.2
AUR62007789 Chenopodium quinoa HOM05D000312 ORTHO05D002725 1.9e-19 101.7 244 61.5
Ah.13g066700 Amaranthus hybridus HOM05D003705 ORTHO05D002725 2.4e-19 101.3 259 71.8
Actinidia19236 Actinidia chinensis HOM05D001705 ORTHO05D002725 4.2e-19 100.5 77 64.9
EL10Ac6g15676 Beta vulgaris HOM05D001705 ORTHO05D002725 1.6e-18 98.6 259 51.7
FAN26G1006 Fragaria x ananassa HOM05D001705 ORTHO05D002725 2.1e-18 98.2 257 52.1
HanXRQChr16g0530901 Helianthus annuus HOM05D001705 ORTHO05D002725 2.1e-18 98.2 257 60.3
ATR0661G193 Amborella trichopoda HOM05D001705 ORTHO05D002725 1.0e-17 95.9 257 70.4
AUR62003299 Chenopodium quinoa HOM05D002120 ORTHO05D002725 3.9e-17 94.0 258 65.9
SGA_v2.0_scaffold2G01235 Striga asiatica HOM05D002120 ORTHO05D002725 8.7e-17 92.8 156 69.9
PSO384G2660 Papaver somniferum HOM05D003705 ORTHO05D002725 1.1e-16 92.4 256 51.6
Ah.02g125140 Amaranthus hybridus HOM05D001705 ORTHO05D002725 4.3e-16 90.5 256 70.7
AUR62027162 Chenopodium quinoa HOM05D001705 ORTHO05D002725 5.6e-16 90.1 258 66.7
ECA246G2311 Erigeron canadensis HOM05D000042 ORTHO05D000980 9.6e-16 89.4 256 59.4
Lsat_1_v5_gn_3_75380 Lactuca sativa HOM05D001705 ORTHO05D002725 9.6e-16 89.4 547 72.2
AUR62007657 Chenopodium quinoa HOM05D004495 ORTHO05D005361 2.8e-15 87.8 257 58.4
AUR62027163 Chenopodium quinoa HOM05D001705 ORTHO05D002725 2.8e-15 87.8 261 65.5
PSO384G4644 Papaver somniferum HOM05D001705 ORTHO05D002725 4.8e-15 87.0 159 68.6
PSO384G1529 Papaver somniferum HOM05D000001 ORTHO05D002725 3.1e-14 84.3 258 47.3
Ah.03g146170 Amaranthus hybridus HOM05D001705 ORTHO05D002725 1.5e-13 82.0 257 59.9
PSO384G2367 Papaver somniferum HOM05D001705 ORTHO05D002725 2.6e-13 81.3 155 69.0
DCAR_021489 Daucus carota HOM05D001705 ORTHO05D002725 5.8e-13 80.1 91 76.9
Atru.chr3.757 Acer truncatum HOM05D001705 ORTHO05D002725 9.9e-13 79.3 51 72.5
AUR62007788 Chenopodium quinoa HOM05D001705 ORTHO05D002725 9.9e-13 79.3 133 75.9
HanXRQChr16g0530911 Helianthus annuus HOM05D001705 ORTHO05D002725 2.2e-12 78.2 48 75.0
Ah.02g127430 Amaranthus hybridus HOM05D001705 ORTHO05D002725 9.3e-11 72.8 91 73.6
AUR62007644 Chenopodium quinoa HOM05D004495 ORTHO05D005361 9.3e-11 72.8 50 68.0
PSO675G4346 Papaver somniferum HOM05D001705 ORTHO05D010003 1.2e-10 72.4 159 66.0
PSO541G3058 Papaver somniferum HOM05D001705 ORTHO05D002725 2.7e-10 71.2 48 68.8
Ah.09g225520 Amaranthus hybridus HOM05D001705 ORTHO05D002725 6.0e-10 70.1 115 58.3
PSO675G9374 Papaver somniferum HOM05D001705 ORTHO05D002725 6.0e-10 70.1 48 68.8
PSO063G6131 Papaver somniferum HOM05D001705 ORTHO05D002725 2.3e-09 68.2 48 66.7
PSO541G4650 Papaver somniferum HOM05D001705 ORTHO05D002725 2.3e-09 68.2 160 34.4
PSO541G4589 Papaver somniferum HOM05D001705 ORTHO05D002725 6.7e-09 66.6 257 48.2
Ah.03g141660 Amaranthus hybridus HOM05D003705 ORTHO05D002725 3.3e-08 64.3 126 74.6
PSO675G6841 Papaver somniferum HOM05D001705 ORTHO05D002725 4.3e-08 63.9 50 60.0
AUR62027161 Chenopodium quinoa HOM05D003705 ORTHO05D002725 1.6e-07 62.0 147 54.4
AUR62044398 Chenopodium quinoa HOM05D001705 ORTHO05D002725 1.6e-07 62.0 147 54.4
AUR62038929 Chenopodium quinoa HOM05D003705 ORTHO05D002725 2.8e-07 61.2 59 52.5
EL10Ac9g20955 Beta vulgaris HOM05D001705 ORTHO05D001002 3.7e-07 60.8 130 71.5
AUR62038925 Chenopodium quinoa HOM05D003705 ORTHO05D002725 6.2e-07 60.1 59 52.5
Medtr1g115225 Medicago truncatula HOM05D003705 ORTHO05D007730 6.2e-07 60.1 50 60.0
arahy.Tifrunner.gnm1.ann1.9YN8B0 Arachis hypogaea HOM05D003705 ORTHO05D007730 1.4e-06 58.9 50 58.0
arahy.Tifrunner.gnm1.ann1.UDT0Z0 Arachis hypogaea HOM05D003705 ORTHO05D007730 1.4e-06 58.9 50 58.0
TPR.G4085 Trifolium pratense HOM05D003705 ORTHO05D007730 1.8e-06 58.5 50 56.0
EL10Ac6g15595 Beta vulgaris HOM05D003705 ORTHO05D007730 2.4e-06 58.2 50 60.0
EL10As1g23058 Beta vulgaris HOM05D003705 ORTHO05D007730 2.4e-06 58.2 50 60.0
AUR62039001 Chenopodium quinoa HOM05D003705 ORTHO05D002725 2.4e-06 58.2 59 50.8
Phvul.007G012600 Phaseolus vulgaris HOM05D003705 ORTHO05D007730 2.4e-06 58.2 50 56.0
RcHm_v2.0_Chr4g0447111 Rosa chinensis HOM05D003705 ORTHO05D007730 2.4e-06 58.2 50 58.0
AUR62030057 Chenopodium quinoa HOM05D003705 ORTHO05D001002 3.1e-06 57.8 59 50.8
PSO675G0217 Papaver somniferum HOM05D001705 ORTHO05D002217 3.1e-06 57.8 50 56.0
VMungo0720G0185 Vigna mungo HOM05D003705 ORTHO05D007730 3.1e-06 57.8 50 56.0
FvH4_4g37290 Fragaria vesca HOM05D003705 ORTHO05D007730 5.3e-06 57.0 50 56.0
FAN17G0997 Fragaria x ananassa HOM05D003705 ORTHO05D007730 5.3e-06 57.0 50 56.0
Glyma.10G288400 Glycine max HOM05D003705 ORTHO05D007730 5.3e-06 57.0 50 56.0
Prupe.1G350800 Prunus persica HOM05D003705 ORTHO05D007730 5.3e-06 57.0 50 56.0
ATR0124G032 Amborella trichopoda HOM05D003705 ORTHO05D007730 6.9e-06 56.6 50 54.0
Lalb_Chr06g0164351 Lupinus albus HOM05D003705 ORTHO05D007730 6.9e-06 56.6 50 56.0
MBI03_g13449_MAGBIO Magnolia biondii HOM05D003705 ORTHO05D007730 6.9e-06 56.6 50 54.0
SEGI_16014 Sequoiadendron giganteum HOM05D003705 ORTHO05D002217 6.9e-06 56.6 50 52.0
Lalb_Chr21g0307451 Lupinus albus HOM05D003705 ORTHO05D007730 9.0e-06 56.2 50 56.0
Medtr8g076360 Medicago truncatula HOM05D002120 ORTHO05D002725 9.0e-06 56.2 50 54.0
Medtr8g076378 Medicago truncatula HOM05D002120 ORTHO05D002725 9.0e-06 56.2 50 54.0
Medtr8g076380 Medicago truncatula HOM05D002120 ORTHO05D002725 9.0e-06 56.2 50 54.0
Medtr8g076410 Medicago truncatula HOM05D002120 ORTHO05D002725 9.0e-06 56.2 50 54.0
TAR371G0400 Trochodendron aralioides HOM05D003705 ORTHO05D007730 9.0e-06 56.2 50 54.0


User provided reference genes

Program Settings