Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu005107.2 Olea europaea HOM05D006878 ORTHO05D008579 3.7e-291 1004.2 523 100.0
Dinv33333 Davidia involucrata HOM05D006878 ORTHO05D008579 1.8e-104 384.0 283 71.0
GSVIVG01033083001 Vitis vinifera HOM05D006878 ORTHO05D008579 3.9e-99 366.3 284 66.2
Rhsim08G0042400 Rhododendron simsii HOM05D006878 ORTHO05D008579 1.9e-98 364.0 286 66.4
Actinidia05902 Actinidia chinensis HOM05D006878 ORTHO05D008579 7.3e-98 362.1 285 67.4
Nitab4.5_0002050g0060 Nicotiana tabacum HOM05D006878 ORTHO05D008579 7.3e-98 362.1 286 66.4
CSS0033487 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 1.2e-97 361.3 278 68.0
SGA_v2.0_scaffold47G17597 Striga asiatica HOM05D006878 ORTHO05D008579 1.2e-97 361.3 289 69.6
Nitab4.5_0009844g0010 Nicotiana tabacum HOM05D006878 ORTHO05D008579 2.8e-97 360.1 286 66.1
SalBow7G1076 Salvia bowleyana HOM05D006878 ORTHO05D008579 3.6e-97 359.8 285 66.7
Peaxi162Scf00420g00554 Petunia axillaris HOM05D006878 ORTHO05D008579 4.7e-97 359.4 287 66.9
CSS0001354 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 1.5e-95 354.4 277 66.8
MSTRG.3257 Avicennia marina HOM05D006878 ORTHO05D008579 3.4e-95 353.2 289 64.7
CAN.G473.102 Capsicum annuum HOM05D006878 ORTHO05D008579 7.6e-95 352.1 286 65.7
TAR629G1805 Trochodendron aralioides HOM05D006878 ORTHO05D008579 1.3e-94 351.3 284 65.1
TAR371G0275 Trochodendron aralioides HOM05D006878 ORTHO05D008579 1.1e-93 348.2 283 64.3
Migut.K01467 Erythranthe guttata HOM05D006878 ORTHO05D008579 4.2e-93 346.3 287 65.5
PGSC0003DMG400020210 Solanum tuberosum HOM05D006878 ORTHO05D008579 5.4e-93 345.9 286 65.0
Potri.001G329300 Populus trichocarpa HOM05D006878 ORTHO05D008579 9.3e-93 345.1 278 65.1
Prupe.3G307100 Prunus persica HOM05D006878 ORTHO05D008579 1.2e-92 344.7 276 66.3
vmacro18351 Vaccinium macrocarpon HOM05D006878 ORTHO05D008579 1.6e-92 344.4 296 63.2
Sabra16G0210700 Salix brachista HOM05D006878 ORTHO05D008579 2.7e-92 343.6 279 65.6
MD09G1010100 Malus domestica HOM05D006878 ORTHO05D008579 7.8e-92 342.0 276 65.2
TAR629G1038 Trochodendron aralioides HOM05D006878 ORTHO05D008579 1.7e-91 340.9 282 63.8
Solyc02g094170.3 Solanum lycopersicum HOM05D006878 ORTHO05D008579 2.3e-91 340.5 286 64.0
Nn3g16452 Nelumbo nucifera HOM05D006878 ORTHO05D008579 3.0e-91 340.1 288 63.9
Cc07_g00890 Coffea canephora HOM05D006878 ORTHO05D008579 3.9e-91 339.7 283 63.3
Sopen02g038800 Solanum pennellii HOM05D006878 ORTHO05D008579 3.9e-91 339.7 286 64.0
Thecc.04G038000 Theobroma cacao HOM05D006878 ORTHO05D008579 5.1e-91 339.3 287 63.1
MD17G1000600 Malus domestica HOM05D006878 ORTHO05D008579 6.6e-91 339.0 277 65.3
CANSAT64G0355 Cannabis sativa HOM05D006878 ORTHO05D008579 8.7e-91 338.6 284 63.7
DCAR_015107 Daucus carota HOM05D006878 ORTHO05D008579 1.1e-90 338.2 286 64.0
Duzib147G1327 Durio zibethinus HOM05D006878 ORTHO05D008579 2.5e-90 337.0 287 63.1
Eucgr.I01641 Eucalyptus grandis HOM05D006878 ORTHO05D008579 2.5e-90 337.0 271 63.5
Manes.15G161800 Manihot esculenta HOM05D006878 ORTHO05D008579 5.6e-90 335.9 273 64.5
ClCG11G007130 Citrullus lanatus HOM05D006878 ORTHO05D008579 9.6e-90 335.1 305 59.7
Ciclev10016370m.g Citrus clementina HOM05D006878 ORTHO05D008579 9.6e-90 335.1 273 64.5
COL.COLO4_13265 Corchorus olitorius HOM05D006878 ORTHO05D008579 6.2e-89 332.4 272 64.7
TWI34G0743 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 1.4e-88 331.3 285 60.4
CsaV3_2G034120 Cucumis sativus L. HOM05D006878 ORTHO05D008579 2.4e-88 330.5 280 63.2
MELO3C008189.2 Cucumis melo HOM05D006878 ORTHO05D008579 9.0e-88 328.6 280 62.9
PGR142G3785 Punica granatum HOM05D006878 ORTHO05D008579 2.6e-87 327.0 266 63.2
TWI34G1534 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 2.6e-87 327.0 278 61.2
Cfa007222 Carpinus fangiana HOM05D006878 ORTHO05D008579 1.7e-86 324.3 277 62.8
QL02p071231 Quercus lobata HOM05D006878 ORTHO05D008579 2.9e-86 323.6 318 56.3
Glyma.16G056000 Glycine max HOM05D006878 ORTHO05D008579 1.9e-85 320.9 287 62.7
Gohir.D07G235800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 1.9e-85 320.9 272 62.5
Gorai.001G271700 Gossypium raimondii HOM05D006878 ORTHO05D008579 1.9e-85 320.9 272 62.5
Sed0002550 Sechium edule HOM05D006878 ORTHO05D008579 4.2e-85 319.7 280 60.4
Gohir.A07G228800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 7.1e-85 318.9 272 62.5
HanXRQChr14g0450611 Helianthus annuus HOM05D006878 ORTHO05D008579 7.1e-85 318.9 282 62.1
Psat3g178400 Pisum sativum HOM05D006878 ORTHO05D008579 9.3e-85 318.5 284 60.9
Atru.chr6.2581 Acer truncatum HOM05D006878 ORTHO05D008579 1.8e-83 314.3 262 63.4
Phvul.001G093000 Phaseolus vulgaris HOM05D006878 ORTHO05D008579 2.3e-83 313.9 287 60.6
VMungo1383G2452 Vigna mungo HOM05D006878 ORTHO05D008579 2.3e-83 313.9 287 60.6
Aqoxy5G03335 Aquilegia oxysepala HOM05D006878 ORTHO05D008579 3.9e-83 313.2 264 62.9
TPR.G38297 Trifolium pratense HOM05D006878 ORTHO05D008579 3.9e-83 313.2 285 60.4
RcHm_v2.0_Chr2g0175731 Rosa chinensis HOM05D006878 ORTHO05D008579 1.1e-82 311.6 312 57.4
Lsat_1_v5_gn_2_93161 Lactuca sativa HOM05D006878 ORTHO05D008579 2.5e-82 310.5 264 62.9
AL6G24810 Arabidopsis lyrata HOM05D006878 ORTHO05D008579 2.1e-81 307.4 288 56.6
AT5G14140 Arabidopsis thaliana HOM05D006878 ORTHO05D008579 4.8e-81 306.2 277 57.8
Thhalv10014409m.g Eutrema salsugineum HOM05D006878 ORTHO05D008579 4.8e-81 306.2 288 56.6
Sc03g0006490 Simmondsia chinensis HOM05D006878 ORTHO05D008579 6.2e-81 305.8 281 57.3
Carub.0006s1234 Capsella rubella HOM05D006878 ORTHO05D008579 8.1e-81 305.4 284 58.1
FAN09G4559 Fragaria x ananassa HOM05D006878 ORTHO05D008579 2.4e-80 303.9 312 56.7
Sp6g29870 Schrenkiella parvula HOM05D006878 ORTHO05D008579 2.4e-80 303.9 312 53.5
SpUn0049_0070 Schrenkiella parvula HOM05D006878 ORTHO05D008579 2.4e-80 303.9 312 53.5
arahy.Tifrunner.gnm1.ann1.G39TQA Arachis hypogaea HOM05D006878 ORTHO05D008579 3.1e-80 303.5 289 57.4
arahy.Tifrunner.gnm1.ann1.1N9EHH Arachis hypogaea HOM05D006878 ORTHO05D008579 1.5e-79 301.2 275 60.0
A03p06460 Brassica napus HOM05D006878 ORTHO05D008579 1.5e-79 301.2 288 56.2
Aa31LG11G14940 Aethionema arabicum HOM05D006878 ORTHO05D008579 2.0e-79 300.8 282 56.4
BcaB01g05305 Brassica carinata HOM05D006878 ORTHO05D008579 2.6e-79 300.4 277 56.7
FvH4_6g53600 Fragaria vesca HOM05D006878 ORTHO05D008579 2.6e-79 300.4 311 55.9
FAN14G5463 Fragaria x ananassa HOM05D006878 ORTHO05D008579 2.6e-79 300.4 311 56.3
BcaB01g06341 Brassica carinata HOM05D006878 ORTHO05D008579 3.4e-79 300.1 282 56.7
CiPaw.04G036900 Carya illinoinensis HOM05D006878 ORTHO05D008579 3.4e-79 300.1 247 63.2
Lalb_Chr14g0363461 Lupinus albus HOM05D006878 ORTHO05D008579 5.8e-79 299.3 272 60.7
MBI07_g39449_MAGBIO Magnolia biondii HOM05D006878 ORTHO05D008579 2.9e-78 297.0 266 59.0
C03p07460 Brassica napus HOM05D006878 ORTHO05D008579 3.8e-78 296.6 289 55.7
BolC3t13247H Brassica oleracea HOM05D006878 ORTHO05D008579 3.8e-78 296.6 289 55.7
AUR62029405 Chenopodium quinoa HOM05D006878 ORTHO05D008579 3.8e-78 296.6 289 55.7
AUR62003439 Chenopodium quinoa HOM05D006878 ORTHO05D008579 1.1e-77 295.0 289 55.7
PSO478G0882 Papaver somniferum HOM05D006878 ORTHO05D008579 3.2e-77 293.5 305 54.4
ATR0561G206 Amborella trichopoda HOM05D006878 ORTHO05D008579 1.3e-75 288.1 305 51.5
Lj1g0011001 Lotus japonicus HOM05D006878 ORTHO05D008579 1.8e-75 287.7 274 59.1
PSO017G0833 Papaver somniferum HOM05D006878 ORTHO05D008579 1.1e-74 285.0 303 53.8
ECA238G1054 Erigeron canadensis HOM05D006878 ORTHO05D008579 2.5e-74 283.9 301 54.5
Ah.02g119990 Amaranthus hybridus HOM05D006878 ORTHO05D008579 4.3e-74 283.1 268 56.7
THA.LOC104821122 Tarenaya hassleriana HOM05D006878 ORTHO05D008579 4.3e-74 283.1 267 55.1
CARHR199200 Cardamine hirsuta HOM05D006878 ORTHO05D008579 1.6e-73 281.2 285 51.9
Zm00001eb112900 Zea mays HOM05D006878 ORTHO05D008579 8.4e-70 268.9 312 48.4
Os11g0498400 Oryza sativa ssp. japonica HOM05D006878 ORTHO05D008579 2.5e-69 267.3 321 49.2
Lju41C53T12 Lonicera japonica HOM05D006878 ORTHO05D008579 4.2e-69 266.5 242 62.0
Medtr7g029090 Medicago truncatula HOM05D006878 ORTHO05D008579 2.3e-67 260.8 191 70.7
SHI03949 Sapria himalayana HOM05D006878 ORTHO05D008579 3.9e-67 260.0 283 49.8
CDE05G3687 Ceratophyllum demersum HOM05D000160 ORTHO05D000496 1.1e-66 258.5 251 56.6
EL10Ac6g15414 Beta vulgaris HOM05D006878 ORTHO05D008579 7.4e-66 255.8 277 52.0
Lalb_Chr22g0360351 Lupinus albus HOM05D006878 ORTHO05D008579 1.3e-62 245.0 177 71.8
SMO367G0946 Selaginella moellendorffii HOM05D006878 ORTHO05D008579 3.3e-50 203.8 253 47.0
Pp3c4_16130 Physcomitrium patens HOM05D006878 ORTHO05D008579 1.8e-48 198.0 291 40.9
Cpa.g.sc171.9 Carica papaya HOM05D006878 ORTHO05D008579 1.4e-45 188.3 162 60.5
Mapoly0041s0098 Marchantia polymorpha HOM05D006878 ORTHO05D008579 4.2e-45 186.8 300 38.3
HPP92_022669 Vanilla planifolia HOM05D006878 ORTHO05D008579 9.7e-42 175.6 154 59.1
Haze_14883 Corylus avellana HOM05D006878 ORTHO05D008579 1.3e-41 175.3 291 41.9
Medtr7g029095 Medicago truncatula HOM05D006878 ORTHO05D008579 4.5e-39 166.8 284 39.1
Ca_22814_v3 Cicer arietinum L. HOM05D006878 ORTHO05D008579 1.3e-38 165.2 286 41.6
CBR_g26294 Chara braunii HOM05D006878 ORTHO05D008579 6.7e-35 152.9 202 41.6
SEGI_11908 Sequoiadendron giganteum HOM05D006878 ORTHO05D008579 9.4e-29 132.5 153 47.1
BraA03t09977Z Brassica rapa HOM05D006878 ORTHO05D008579 2.0e-26 124.8 127 53.5
FAN02G3703 Fragaria x ananassa HOM05D006878 ORTHO05D008579 4.8e-25 120.2 150 51.3
Medtr7g029065 Medicago truncatula HOM05D004216 ORTHO05D004926 3.6e-20 104.0 106 58.5
CDE05G3052 Ceratophyllum demersum HOM05D006878 ORTHO05D008579 4.4e-18 97.1 111 49.5
PRCOL_00001512 Prasinoderma coloniale HOM05D006878 ORTHO05D008579 1.8e-16 91.7 93 44.1
Oeu005108.1 Olea europaea HOM05D006878 ORTHO05D008579 2.8e-12 77.8 47 87.2
Actinidia36205 Actinidia chinensis HOM05D006878 ORTHO05D008579 2.0e-10 71.6 49 69.4
Oeu029946.1 Olea europaea HOM05D029122 ORTHO05D007939 1.9e-08 65.1 41 78.0
FAN23G0458 Fragaria x ananassa HOM05D006878 ORTHO05D008579 3.2e-08 64.3 38 81.6
FAN23G0356 Fragaria x ananassa HOM05D006878 ORTHO05D008579 2.7e-07 61.2 38 65.8
Actinidia36204 Actinidia chinensis HOM05D006878 ORTHO05D008579 1.3e-06 58.9 58 56.9
Oeu053818.1 Olea europaea HOM05D029122 ORTHO05D289218 5.0e-06 57.0 90 41.1


User provided reference genes

Program Settings