Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu005084.1 Olea europaea HOM05D005408 ORTHO05D006790 0.0e+00 1761.1 905 100.0
Oeu002940.1 Olea europaea HOM05D005408 ORTHO05D006790 5.0e-304 1047.7 910 64.2
MSTRG.21921 Avicennia marina HOM05D005408 ORTHO05D006790 5.2e-277 958.0 964 57.5
Dinv27073 Davidia involucrata HOM05D005408 ORTHO05D006790 4.9e-267 924.9 993 54.9
SalBow3G0714 Salvia bowleyana HOM05D005408 ORTHO05D006790 5.1e-264 914.8 952 57.5
Migut.N00286 Erythranthe guttata HOM05D005408 ORTHO05D006790 4.9e-259 898.3 957 54.9
Dinv29839 Davidia involucrata HOM05D005408 ORTHO05D006790 1.1e-255 887.1 950 54.5
Peaxi162Scf00392g00730 Petunia axillaris HOM05D005408 ORTHO05D006790 7.3e-255 884.4 960 54.2
Solyc09g090340.3 Solanum lycopersicum HOM05D005408 ORTHO05D006790 3.4e-252 875.5 980 53.3
Sopen09g033240 Solanum pennellii HOM05D005408 ORTHO05D006790 3.4e-252 875.5 981 53.1
Thecc.04G259100 Theobroma cacao HOM05D005408 ORTHO05D006790 9.9e-252 874.0 933 55.1
Actinidia20821 Actinidia chinensis HOM05D005408 ORTHO05D006790 4.9e-251 871.7 979 53.3
PGSC0003DMG400017212 Solanum tuberosum HOM05D005408 ORTHO05D006790 3.5e-249 865.5 984 52.7
SGA_v2.0_scaffold43G16217 Striga asiatica HOM05D005408 ORTHO05D006790 3.9e-248 862.1 961 53.9
GSVIVG01027854001 Vitis vinifera HOM05D005408 ORTHO05D006790 1.3e-246 857.1 942 53.6
DCAR_024278 Daucus carota HOM05D005408 ORTHO05D006790 1.6e-246 856.7 953 52.3
CSS0047984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 3.1e-245 852.4 985 51.4
TAR633G1608 Trochodendron aralioides HOM05D005408 ORTHO05D006790 2.9e-243 845.9 1009 50.8
CAN.G220.39 Capsicum annuum HOM05D005408 ORTHO05D006790 4.9e-243 845.1 1025 50.0
Haze_11418 Corylus avellana HOM05D005408 ORTHO05D006790 4.2e-242 842.0 971 51.1
Prupe.1G042300 Prunus persica HOM05D005408 ORTHO05D006790 4.2e-242 842.0 987 50.6
Duzib151G0888 Durio zibethinus HOM05D005408 ORTHO05D006790 2.1e-241 839.7 943 52.7
Duzib212G0761 Durio zibethinus HOM05D005408 ORTHO05D006790 3.5e-241 839.0 917 52.7
QL06p019224 Quercus lobata HOM05D005408 ORTHO05D006790 1.8e-240 836.6 931 52.1
TWI09G0385 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 1.8e-237 826.6 941 52.6
CSS0016984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 3.1e-237 825.9 978 50.7
Nitab4.5_0000596g0060 Nicotiana tabacum HOM05D005408 ORTHO05D006790 3.1e-237 825.9 1064 48.5
COL.COLO4_15917 Corchorus olitorius HOM05D005408 ORTHO05D006790 4.0e-237 825.5 881 54.4
Nitab4.5_0000044g0530 Nicotiana tabacum HOM05D005408 ORTHO05D006790 2.6e-236 822.8 1009 50.5
Cfa014743 Carpinus fangiana HOM05D005408 ORTHO05D006790 3.4e-236 822.4 969 50.6
Lj3A679T38 Lonicera japonica HOM05D005408 ORTHO05D006790 4.9e-235 818.5 1007 50.1
Cc03_g05790 Coffea canephora HOM05D005408 ORTHO05D006790 1.4e-234 817.0 985 51.5
MD13G1216600 Malus domestica HOM05D005408 ORTHO05D006790 3.2e-234 815.8 973 50.8
Lj3A684T25 Lonicera japonica HOM05D005408 ORTHO05D006790 4.2e-234 815.5 997 50.7
Rhsim02G0041600 Rhododendron simsii HOM05D005408 ORTHO05D006790 1.2e-233 813.9 837 54.8
MD16G1222000 Malus domestica HOM05D005408 ORTHO05D006790 1.3e-232 810.4 972 50.1
CiPaw.02G109300 Carya illinoinensis HOM05D005408 ORTHO05D006790 1.5e-231 807.0 959 50.7
FAN12G0827 Fragaria x ananassa HOM05D005408 ORTHO05D006790 1.9e-231 806.6 895 52.6
Atru.chr4.2004 Acer truncatum HOM05D005408 ORTHO05D006790 7.4e-231 804.7 945 52.3
Hma1.2p1_0112F.1_g054305 Hydrangea macrophylla HOM05D005408 ORTHO05D006790 7.4e-231 804.7 712 58.8
Nn1g02867 Nelumbo nucifera HOM05D005408 ORTHO05D006790 1.3e-230 803.9 1033 48.8
EL10Ac3g04981 Beta vulgaris HOM05D005408 ORTHO05D006790 1.6e-230 803.5 962 50.6
Ciclev10004264m.g Citrus clementina HOM05D005408 ORTHO05D006790 1.4e-229 800.4 929 51.2
FvH4_4g04020 Fragaria vesca HOM05D005408 ORTHO05D006790 3.1e-229 799.3 893 52.3
Gohir.A02G040500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 1.2e-228 797.3 941 50.9
TAR362G0279 Trochodendron aralioides HOM05D005408 ORTHO05D006790 2.0e-228 796.6 994 49.3
Potri.010G069200 Populus trichocarpa HOM05D005408 ORTHO05D006790 2.2e-227 793.1 952 51.3
TWI53G1583 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 5.0e-227 792.0 943 50.4
FAN17G2537 Fragaria x ananassa HOM05D005408 ORTHO05D006790 6.5e-227 791.6 932 50.9
Manes.15G043200 Manihot esculenta HOM05D005408 ORTHO05D006790 3.2e-226 789.3 944 50.5
Sc19g0003230 Simmondsia chinensis HOM05D005408 ORTHO05D006790 3.2e-226 789.3 959 50.2
Gohir.D02G046500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 4.2e-226 788.9 941 50.8
Manes.15G043300 Manihot esculenta HOM05D005408 ORTHO05D006790 4.2e-226 788.9 937 50.8
vmacro15459 Vaccinium macrocarpon HOM05D005408 ORTHO05D006790 5.5e-226 788.5 1104 46.2
Potri.008G169200 Populus trichocarpa HOM05D005408 ORTHO05D006790 1.0e-224 784.3 936 52.2
CARHR220500 Cardamine hirsuta HOM05D005408 ORTHO05D006790 1.8e-224 783.5 935 49.5
Migut.G00502 Erythranthe guttata HOM05D005408 ORTHO05D006790 2.2e-222 776.5 913 53.2
ClCG05G004200 Citrullus lanatus HOM05D005408 ORTHO05D006790 2.8e-222 776.2 978 48.4
RcHm_v2.0_Chr4g0394291 Rosa chinensis HOM05D005408 ORTHO05D006790 3.7e-222 775.8 955 48.8
SGA_v2.0_scaffold101G29731 Striga asiatica HOM05D005408 ORTHO05D006790 6.3e-222 775.0 915 50.5
Cpa.g.sc44.32 Carica papaya HOM05D005408 ORTHO05D006790 1.7e-219 766.9 949 49.3
AUR62015544 Chenopodium quinoa HOM05D005408 ORTHO05D006790 1.7e-219 766.9 961 49.5
MELO3C006406.2 Cucumis melo HOM05D005408 ORTHO05D006790 1.7e-219 766.9 981 48.1
CANSAT54G2691 Cannabis sativa HOM05D005408 ORTHO05D006790 2.2e-219 766.5 957 50.2
Sabra08G0129000 Salix brachista HOM05D005408 ORTHO05D006790 5.5e-218 761.9 957 50.5
Gorai.005G051300 Gossypium raimondii HOM05D005408 ORTHO05D006790 7.2e-218 761.5 884 51.5
CsaV3_3G011930 Cucumis sativus L. HOM05D005408 ORTHO05D006790 9.4e-218 761.1 978 47.3
Sp7g12340 Schrenkiella parvula HOM05D005408 ORTHO05D006790 1.2e-217 760.8 938 47.8
Eucgr.H03018 Eucalyptus grandis HOM05D005408 ORTHO05D006790 1.6e-217 760.4 952 49.6
Carub.0007s2798 Capsella rubella HOM05D005408 ORTHO05D006790 2.7e-217 759.6 933 48.7
Aa31LG9G3050 Aethionema arabicum HOM05D005408 ORTHO05D006790 3.6e-217 759.2 935 47.9
Sabra10G0037900 Salix brachista HOM05D005408 ORTHO05D006790 8.8e-216 754.6 932 50.0
AT4G14310 Arabidopsis thaliana HOM05D005408 ORTHO05D006790 5.7e-215 751.9 933 48.2
PGR004G2334 Punica granatum HOM05D005408 ORTHO05D006790 1.3e-214 750.7 939 49.6
FAN22G0039 Fragaria x ananassa HOM05D005408 ORTHO05D006790 6.3e-214 748.4 973 47.3
AUR62002164 Chenopodium quinoa HOM05D005408 ORTHO05D006790 1.1e-213 747.7 946 49.3
Thhalv10024359m.g Eutrema salsugineum HOM05D005408 ORTHO05D006790 1.8e-213 746.9 932 47.6
CiPaw.01G181400 Carya illinoinensis HOM05D005408 ORTHO05D006790 5.3e-213 745.3 945 48.5
Hund03055 Selenicereus undatus HOM05D005408 ORTHO05D006790 1.2e-212 744.2 984 47.4
Sed0026902 Sechium edule HOM05D005408 ORTHO05D006790 2.0e-212 743.4 919 48.6
PSO832G1937 Papaver somniferum HOM05D005408 ORTHO05D006790 3.5e-212 742.7 986 47.1
AL7G41950 Arabidopsis lyrata HOM05D005408 ORTHO05D006790 4.5e-212 742.3 951 46.3
ECA248G0134 Erigeron canadensis HOM05D005408 ORTHO05D006790 5.9e-212 741.9 923 49.9
HanXRQChr11g0330791 Helianthus annuus HOM05D005408 ORTHO05D006790 7.7e-212 741.5 953 48.5
MSTRG.4147 Avicennia marina HOM05D005408 ORTHO05D006790 1.3e-211 740.7 905 49.7
THA.LOC104804761 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 5.0e-211 738.8 938 48.1
Lalb_Chr03g0037341 Lupinus albus HOM05D005408 ORTHO05D006790 1.9e-210 736.9 939 48.9
PSO210G0343 Papaver somniferum HOM05D005408 ORTHO05D006790 2.7e-209 733.0 984 47.1
Aqoxy5G00183 Aquilegia oxysepala HOM05D005408 ORTHO05D006790 8.0e-209 731.5 1009 46.9
BcaNung06103 Brassica carinata HOM05D005408 ORTHO05D006790 1.5e-207 727.2 913 48.2
MBI07_g31083_MAGBIO Magnolia biondii HOM05D005408 ORTHO05D006790 2.8e-206 723.0 1008 46.3
arahy.Tifrunner.gnm1.ann1.NA4LRU Arachis hypogaea HOM05D005408 ORTHO05D006790 3.7e-206 722.6 944 46.6
C03p76860 Brassica napus HOM05D005408 ORTHO05D006790 1.8e-205 720.3 917 46.9
BcaC01g00205 Brassica carinata HOM05D005408 ORTHO05D006790 4.1e-205 719.2 917 46.6
arahy.Tifrunner.gnm1.ann1.HQEG75 Arachis hypogaea HOM05D005408 ORTHO05D006790 9.1e-205 718.0 943 47.4
THA.LOC104822240 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 2.0e-204 716.8 952 46.7
Lj6g0021221 Lotus japonicus HOM05D005408 ORTHO05D006790 5.9e-204 715.3 713 54.7
A08p24350 Brassica napus HOM05D005408 ORTHO05D006790 1.1e-202 711.1 916 46.2
BolC3t19941H Brassica oleracea HOM05D005408 ORTHO05D006790 4.2e-202 709.1 937 45.7
Glyma.10G004700 Glycine max HOM05D005408 ORTHO05D006790 4.2e-202 709.1 680 54.9
Phvul.007G275400 Phaseolus vulgaris HOM05D005408 ORTHO05D006790 1.6e-201 707.2 690 53.9
Lsat_1_v5_gn_1_74661 Lactuca sativa HOM05D005408 ORTHO05D006790 1.0e-200 704.5 983 46.8
BraA08t34390Z Brassica rapa HOM05D005408 ORTHO05D006790 4.0e-200 702.6 941 45.4
VMungo0720G1073 Vigna mungo HOM05D005408 ORTHO05D006790 1.2e-199 701.0 740 51.2
Glyma.02G003800 Glycine max HOM05D005408 ORTHO05D006790 2.6e-199 699.9 682 54.3
TPR.G25189 Trifolium pratense HOM05D005408 ORTHO05D006790 1.7e-198 697.2 732 53.7
Psat6g104520 Pisum sativum HOM05D005408 ORTHO05D006790 3.8e-195 686.0 841 48.4
Ca_03010_v3 Cicer arietinum L. HOM05D005408 ORTHO05D006790 1.9e-194 683.7 728 53.7
Medtr1g041685 Medicago truncatula HOM05D005408 ORTHO05D006790 4.2e-194 682.6 765 51.1
HanXRQChr01g0023201 Helianthus annuus HOM05D005408 ORTHO05D006790 2.2e-190 670.2 934 47.2
ATR0736G089 Amborella trichopoda HOM05D005408 ORTHO05D006790 1.2e-177 627.9 721 49.4
Zm00001eb258510 Zea mays HOM05D005408 ORTHO05D006790 1.3e-174 617.8 688 48.4
Zm00001eb191660 Zea mays HOM05D005408 ORTHO05D006790 5.4e-173 612.5 681 48.5
unitig_736.g22443 Utricularia gibba HOM05D005408 ORTHO05D006790 4.9e-166 589.3 831 44.3
CDE04G2551 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 2.4e-165 587.0 789 45.9
CDE07G1006 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 3.5e-164 583.2 997 40.0
SEGI_14734 Sequoiadendron giganteum HOM05D005408 ORTHO05D006790 1.7e-147 527.7 702 42.7
HPP92_008326 Vanilla planifolia HOM05D005408 ORTHO05D006790 1.6e-140 504.6 625 46.2
Ah.13g072600 Amaranthus hybridus HOM05D005408 ORTHO05D006790 1.8e-120 438.0 719 43.1
TPR.G25191 Trifolium pratense HOM05D005408 ORTHO05D006790 2.7e-116 424.1 650 40.6
Mapoly0063s0094 Marchantia polymorpha HOM05D005408 ORTHO05D006790 3.3e-106 390.6 560 38.4
Os02g0809900 Oryza sativa ssp. japonica HOM05D005408 ORTHO05D006790 8.5e-94 349.4 294 56.8
Pp3c16_10130 Physcomitrium patens HOM05D005408 ORTHO05D006790 2.5e-93 347.8 490 37.6
Pp3c25_7300 Physcomitrium patens HOM05D005408 ORTHO05D006790 2.0e-90 338.2 809 31.3
AagrBONN_evm.TU.Sc2ySwM_228.3605 Anthoceros agrestis HOM05D005408 ORTHO05D006790 1.9e-85 321.6 485 36.5
SalBow8G3468 Salvia bowleyana HOM05D005408 ORTHO05D006790 3.2e-40 171.4 249 43.0
SalBow7G4774 Salvia bowleyana HOM05D005408 ORTHO05D006790 5.1e-38 164.1 115 73.0
CBR_g30942 Chara braunii HOM05D005408 ORTHO05D006790 1.8e-27 129.0 372 26.6
Rhsim02G0041700 Rhododendron simsii HOM05D005408 ORTHO05D006790 3.0e-22 111.7 188 40.4
Hund11908 Selenicereus undatus HOM05D005408 ORTHO05D006790 1.3e-20 106.3 127 44.1
BolC4t25725H Brassica oleracea HOM05D005408 ORTHO05D006790 1.3e-12 79.7 107 43.0
C04p41440 Brassica napus HOM05D005408 ORTHO05D006790 4.0e-11 74.7 108 41.7
CiPaw.06G041800 Carya illinoinensis HOM05D005408 ORTHO05D006790 1.2e-10 73.2 334 31.4
A04p07780 Brassica napus HOM05D005408 ORTHO05D006790 1.5e-10 72.8 80 53.8
C04p41430 Brassica napus HOM05D005408 ORTHO05D006790 2.2e-09 68.9 117 36.8
BolC4t25724H Brassica oleracea HOM05D005408 ORTHO05D006790 2.9e-09 68.6 117 36.8


User provided reference genes

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