Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu004884.1 Olea europaea HOM05D000289 ORTHO05D009609 2.0e-46 188.7 94 100.0
SalBow1G4948 Salvia bowleyana HOM05D000289 ORTHO05D009609 2.1e-19 99.0 90 50.0
Nitab4.5_0007024g0060 Nicotiana tabacum HOM05D000289 ORTHO05D009609 2.5e-17 92.0 85 50.6
GSVIVG01005053001 Vitis vinifera HOM05D000289 ORTHO05D009609 9.7e-17 90.1 79 53.2
Dinv39898 Davidia involucrata HOM05D000289 ORTHO05D009609 6.3e-16 87.4 90 53.3
SGA_v2.0_scaffold204G41603 Striga asiatica HOM05D000289 ORTHO05D009609 8.2e-16 87.0 86 45.3
TAR628G0284 Trochodendron aralioides HOM05D000289 ORTHO05D009609 8.2e-16 87.0 84 50.0
Migut.H00471 Erythranthe guttata HOM05D000289 ORTHO05D009609 1.4e-15 86.3 87 49.4
HanXRQChr14g0430741 Helianthus annuus HOM05D000289 ORTHO05D009609 1.4e-15 86.3 87 48.3
Actinidia30856 Actinidia chinensis HOM05D000289 ORTHO05D009609 2.4e-15 85.5 90 47.8
Nitab4.5_0002157g0050 Nicotiana tabacum HOM05D000289 ORTHO05D009609 2.4e-15 85.5 85 47.1
Lsat_1_v5_gn_4_168300 Lactuca sativa HOM05D000289 ORTHO05D009609 3.1e-15 85.1 86 46.5
Duzib187G1431 Durio zibethinus HOM05D000289 ORTHO05D009609 2.6e-14 82.0 87 51.7
ECA232G3611 Erigeron canadensis HOM05D000289 ORTHO05D009609 4.5e-14 81.3 86 46.5
Atru.chr3.436 Acer truncatum HOM05D000289 ORTHO05D009609 1.0e-13 80.1 83 48.2
Cfa016388 Carpinus fangiana HOM05D000289 ORTHO05D009609 1.7e-13 79.3 90 45.6
Manes.13G128900 Manihot esculenta HOM05D000289 ORTHO05D009609 2.2e-13 79.0 79 48.1
CiPaw.01G025400 Carya illinoinensis HOM05D000289 ORTHO05D009609 3.8e-13 78.2 87 43.7
DCAR_025702 Daucus carota HOM05D000289 ORTHO05D009609 3.8e-13 78.2 88 44.3
MD02G1163700 Malus domestica HOM05D000289 ORTHO05D009609 3.8e-13 78.2 87 46.0
vmacro17914 Vaccinium macrocarpon HOM05D000289 ORTHO05D009609 3.8e-13 78.2 90 44.4
VMungo1215G1697 Vigna mungo HOM05D000289 ORTHO05D009609 3.8e-13 78.2 87 47.1
Glyma.01G183200 Glycine max HOM05D000289 ORTHO05D009609 5.0e-13 77.8 90 47.8
Glyma.11G059100 Glycine max HOM05D000289 ORTHO05D009609 5.0e-13 77.8 90 46.7
Rhsim08G0104600 Rhododendron simsii HOM05D000289 ORTHO05D009609 5.0e-13 77.8 90 44.4
Lj7A50T11 Lonicera japonica HOM05D000289 ORTHO05D009609 6.5e-13 77.4 90 43.3
Lj7A45G56 Lonicera japonica HOM05D000289 ORTHO05D009609 2.5e-12 75.5 90 42.2
Aqoxy6G00894 Aquilegia oxysepala HOM05D000289 ORTHO05D009609 3.2e-12 75.1 85 45.9
CSS0030947 Camellia sinensis var. sinensis HOM05D000289 ORTHO05D009609 3.2e-12 75.1 90 45.6
Nn6g32098 Nelumbo nucifera HOM05D000289 ORTHO05D009609 3.2e-12 75.1 84 41.7
RhsimUnG0071000 Rhododendron simsii HOM05D000289 ORTHO05D009609 3.2e-12 75.1 89 43.8
Phvul.002G021800 Phaseolus vulgaris HOM05D000289 ORTHO05D009609 4.2e-12 74.7 87 46.0
Atru.chr3.435 Acer truncatum HOM05D000289 ORTHO05D009609 5.5e-12 74.3 94 42.6
Peaxi162Scf00993g00335 Petunia axillaris HOM05D000289 ORTHO05D009609 7.2e-12 73.9 62 53.2
PGSC0003DMG400010069 Solanum tuberosum HOM05D000289 ORTHO05D009609 7.2e-12 73.9 67 47.8
Ciclev10026468m.g Citrus clementina HOM05D000289 ORTHO05D009609 1.2e-11 73.2 86 44.2
Potri.007G038500 Populus trichocarpa HOM05D000289 ORTHO05D009609 1.2e-11 73.2 87 47.1
Sopen02g035070 Solanum pennellii HOM05D000289 ORTHO05D009609 1.2e-11 73.2 67 47.8
PSO541G2148 Papaver somniferum HOM05D000289 ORTHO05D009609 2.1e-11 72.4 88 38.6
PSO675G0040 Papaver somniferum HOM05D000289 ORTHO05D009609 2.1e-11 72.4 88 38.6
FvH4_1g15000 Fragaria vesca HOM05D000289 ORTHO05D009609 3.6e-11 71.6 87 43.7
Thecc.01G050100 Theobroma cacao HOM05D000289 ORTHO05D009609 1.8e-10 69.3 90 44.4
Prupe.7G140200 Prunus persica HOM05D000289 ORTHO05D009609 3.9e-10 68.2 87 41.4
MBI16_g19910_MAGBIO Magnolia biondii HOM05D000289 ORTHO05D009609 5.1e-10 67.8 66 45.5
FAN26G0234 Fragaria x ananassa HOM05D000289 ORTHO05D009609 6.7e-10 67.4 87 42.5
Lalb_Chr09g0322971 Lupinus albus HOM05D000289 ORTHO05D009609 8.8e-10 67.0 87 41.4
Gohir.D10G095100 Gossypium hirsutum HOM05D000289 ORTHO05D009609 1.5e-09 66.2 91 42.9
Psat2g164680 Pisum sativum HOM05D000289 ORTHO05D009609 2.0e-09 65.9 90 35.6
CAN.G836.49 Capsicum annuum HOM05D000289 ORTHO05D009609 4.3e-09 64.7 77 39.0
Gorai.011G104500 Gossypium raimondii HOM05D000289 ORTHO05D009609 4.3e-09 64.7 86 43.0
Gohir.A10G093100 Gossypium hirsutum HOM05D000289 ORTHO05D009609 1.7e-08 62.8 91 40.7
CANSAT01G1070 Cannabis sativa HOM05D000289 ORTHO05D009609 2.8e-08 62.0 88 37.5
CDE01G0553 Ceratophyllum demersum HOM05D000323 ORTHO05D000201 4.8e-08 61.2 84 38.1
THA.LOC104807574 Tarenaya hassleriana HOM05D000289 ORTHO05D009609 4.8e-08 61.2 90 37.8
TPR.G11350 Trifolium pratense HOM05D000289 ORTHO05D009609 6.3e-08 60.8 99 36.4
Cc03_g08140 Coffea canephora HOM05D000289 ORTHO05D009609 8.2e-08 60.5 59 49.2
Ca_24799_v3 Cicer arietinum L. HOM05D000289 ORTHO05D009609 1.4e-07 59.7 85 37.6
TWI53G1138 Tripterygium wilfordii HOM05D000289 ORTHO05D009609 2.4e-07 58.9 79 40.5
Medtr5g018250 Medicago truncatula HOM05D000289 ORTHO05D009609 3.1e-07 58.5 90 33.3
TAR636G0508 Trochodendron aralioides HOM05D000289 ORTHO05D000208 3.1e-07 58.5 74 40.5
BcaC07g40980 Brassica carinata HOM05D000289 ORTHO05D009609 4.1e-07 58.2 86 36.0
C08p39800 Brassica napus HOM05D000289 ORTHO05D009609 4.1e-07 58.2 86 36.0
BolC8t51552H Brassica oleracea HOM05D000289 ORTHO05D009609 4.1e-07 58.2 86 36.0
A09p56840 Brassica napus HOM05D000289 ORTHO05D009609 5.3e-07 57.8 86 36.0
BraA09t41075Z Brassica rapa HOM05D000289 ORTHO05D009609 5.3e-07 57.8 86 36.0
Hma1.2p1_2791F.1_g328620 Hydrangea macrophylla HOM05D000289 ORTHO05D009609 5.3e-07 57.8 89 37.1
AT2G23640 Arabidopsis thaliana HOM05D000289 ORTHO05D009609 6.9e-07 57.4 86 38.4
PSO384G0793 Papaver somniferum HOM05D000289 ORTHO05D000208 6.9e-07 57.4 72 41.7
PSO339G4416 Papaver somniferum HOM05D000289 ORTHO05D000208 9.1e-07 57.0 72 40.3
Mapoly0035s0106 Marchantia polymorpha HOM05D000289 ORTHO05D000208 1.2e-06 56.6 59 45.8
Duzib068G0389 Durio zibethinus HOM05D000289 ORTHO05D000208 1.5e-06 56.2 77 35.1
Thhalv10000566m.g Eutrema salsugineum HOM05D000289 ORTHO05D009609 1.5e-06 56.2 86 37.2
Lj2g0014406 Lotus japonicus HOM05D000289 ORTHO05D009609 1.5e-06 56.2 90 35.6
AT5G41600 Arabidopsis thaliana HOM05D000289 ORTHO05D000208 2.0e-06 55.8 79 35.4
Cfa003964 Carpinus fangiana HOM05D000289 ORTHO05D009609 2.0e-06 55.8 90 34.4
AL7G47800 Arabidopsis lyrata HOM05D000289 ORTHO05D000208 2.6e-06 55.5 77 35.1
Haze_15457 Corylus avellana HOM05D000289 ORTHO05D009609 2.6e-06 55.5 90 33.3
MSTRG.8483 Avicennia marina HOM05D000289 ORTHO05D000208 3.4e-06 55.1 70 37.1
AL4G13610 Arabidopsis lyrata HOM05D000289 ORTHO05D009609 4.5e-06 54.7 86 38.4
DCAR_008522 Daucus carota HOM05D000289 ORTHO05D000208 4.5e-06 54.7 58 43.1
TWI53G1093 Tripterygium wilfordii HOM05D000289 ORTHO05D000208 4.5e-06 54.7 72 40.3
arahy.Tifrunner.gnm1.ann1.SZY8GR Arachis hypogaea HOM05D000289 ORTHO05D009609 5.9e-06 54.3 87 37.9
SEGI_39669 Sequoiadendron giganteum HOM05D000289 ORTHO05D000208 7.7e-06 53.9 70 40.0


User provided reference genes

Program Settings