Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu004869.1 Olea europaea HOM05D006144 ORTHO05D006357 0.0e+00 2350.9 1189 100.0
Oeu003786.1 Olea europaea HOM05D006144 ORTHO05D006357 2.7e-297 1025.8 1226 48.6
Oeu049306.1 Olea europaea HOM05D006144 ORTHO05D006357 9.9e-292 1007.3 1266 47.5
MSTRG.2895 Avicennia marina HOM05D006144 ORTHO05D006357 2.7e-281 972.6 1338 45.6
Atru.chr3.396 Acer truncatum HOM05D006144 ORTHO05D006357 1.0e-272 944.1 1327 43.5
CSS0009151 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 2.5e-271 939.5 1342 43.3
CSS0011451 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 2.1e-270 936.4 1342 43.2
Actinidia12060 Actinidia chinensis HOM05D006144 ORTHO05D006357 2.0e-268 929.9 1323 42.9
Dinv39873 Davidia involucrata HOM05D006144 ORTHO05D006357 1.3e-267 927.2 1285 43.9
Cc07_g05860 Coffea canephora HOM05D006144 ORTHO05D006357 8.4e-267 924.5 1329 43.2
Actinidia36503 Actinidia chinensis HOM05D006144 ORTHO05D006357 5.6e-263 911.8 1317 42.9
Nitab4.5_0000382g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 5.8e-260 901.7 1331 42.1
Prupe.7G136200 Prunus persica HOM05D006144 ORTHO05D006357 1.7e-259 900.2 1330 42.1
Migut.H00451 Erythranthe guttata HOM05D006144 ORTHO05D006357 4.9e-259 898.7 1321 44.4
Nitab4.5_0001684g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 2.5e-258 896.3 1330 42.1
Solyc03g044620.4 Solanum lycopersicum HOM05D006144 ORTHO05D006357 2.3e-256 889.8 1338 41.5
Duzib147G1467 Durio zibethinus HOM05D006144 ORTHO05D006357 1.1e-255 887.5 1342 41.8
MD15G1281500 Malus domestica HOM05D006144 ORTHO05D006357 7.4e-255 884.8 1318 42.0
Cfa003998 Carpinus fangiana HOM05D006144 ORTHO05D006357 4.8e-254 882.1 1343 42.1
CiPaw.01G021400 Carya illinoinensis HOM05D006144 ORTHO05D006357 8.2e-254 881.3 1289 42.2
Peaxi162Scf00183g00711 Petunia axillaris HOM05D006144 ORTHO05D006357 6.9e-253 878.2 1331 42.0
Haze_15426 Corylus avellana HOM05D006144 ORTHO05D006357 1.2e-252 877.5 1344 42.0
MD02G1169100 Malus domestica HOM05D006144 ORTHO05D006357 2.0e-252 876.7 1342 41.1
Rhsim10G0119800 Rhododendron simsii HOM05D006144 ORTHO05D006357 2.6e-252 876.3 1195 43.5
PGSC0003DMG400019754 Solanum tuberosum HOM05D006144 ORTHO05D006357 1.4e-250 870.5 1295 41.2
Ciclev10024721m.g Citrus clementina HOM05D006144 ORTHO05D006357 9.3e-250 867.8 1313 41.4
QL06p042250 Quercus lobata HOM05D006144 ORTHO05D006357 2.7e-249 866.3 1326 41.6
Sopen03g008900 Solanum pennellii HOM05D006144 ORTHO05D006357 3.0e-248 862.8 1337 40.8
CAN.G11.1 Capsicum annuum HOM05D006144 ORTHO05D006357 1.6e-246 857.1 1324 40.9
vmacro05326 Vaccinium macrocarpon HOM05D006144 ORTHO05D006357 1.1e-245 854.4 1437 38.1
Gohir.A11G046100 Gossypium hirsutum HOM05D006144 ORTHO05D006357 9.4e-242 841.3 1350 40.5
RcHm_v2.0_Chr2g0105021 Rosa chinensis HOM05D006144 ORTHO05D006357 1.0e-240 837.8 1313 41.5
CSS0044544 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 8.8e-240 834.7 1242 42.7
Thecc.01G052700 Theobroma cacao HOM05D006144 ORTHO05D006357 8.8e-240 834.7 1330 39.9
Gorai.007G053500 Gossypium raimondii HOM05D006144 ORTHO05D006357 2.6e-239 833.2 1356 40.4
FAN26G0177 Fragaria x ananassa HOM05D006144 ORTHO05D006357 4.4e-239 832.4 1313 41.2
Gohir.D11G049700 Gossypium hirsutum HOM05D006144 ORTHO05D006357 4.8e-238 828.9 1356 40.2
Hma1.2p1_0200F.1_g086100 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 1.4e-237 827.4 1330 40.5
Potri.005G136600 Populus trichocarpa HOM05D006144 ORTHO05D006357 2.4e-237 826.6 1344 39.9
COL.COLO4_22183 Corchorus olitorius HOM05D006144 ORTHO05D006357 4.1e-237 825.9 1315 40.5
Potri.007G041300 Populus trichocarpa HOM05D006144 ORTHO05D006357 4.1e-237 825.9 1340 40.4
FAN23G0857 Fragaria x ananassa HOM05D006144 ORTHO05D006357 6.5e-235 818.5 1316 40.3
FAN19G3143 Fragaria x ananassa HOM05D006144 ORTHO05D006357 1.9e-234 817.0 1316 40.7
FAN28G0789 Fragaria x ananassa HOM05D006144 ORTHO05D006357 7.2e-234 815.1 1290 41.2
FvH4_1g15710 Fragaria vesca HOM05D006144 ORTHO05D006357 9.4e-234 814.7 1316 40.6
Dinv29969 Davidia involucrata HOM05D006144 ORTHO05D006357 4.5e-228 795.8 1182 42.8
Manes.12G100500 Manihot esculenta HOM05D006144 ORTHO05D006357 1.2e-225 787.7 1329 38.8
Nn5g30196 Nelumbo nucifera HOM05D006144 ORTHO05D006357 2.7e-225 786.6 1345 39.2
TWI09G0039 Tripterygium wilfordii HOM05D006144 ORTHO05D006357 2.7e-225 786.6 1325 38.6
CANSAT01G0270 Cannabis sativa HOM05D006144 ORTHO05D006357 5.2e-224 782.3 1334 39.1
DCAR_025720 Daucus carota HOM05D006144 ORTHO05D006357 4.5e-220 769.2 1322 38.0
Sabra07G0036900 Salix brachista HOM05D006144 ORTHO05D006357 5.0e-219 765.8 1292 39.2
SGA_v2.0_scaffold204G41590 Striga asiatica HOM05D006144 ORTHO05D006357 1.4e-216 757.7 1344 38.6
Nn1g05861 Nelumbo nucifera HOM05D006144 ORTHO05D006357 1.5e-210 737.6 1355 39.0
Aqoxy6G01406 Aquilegia oxysepala HOM05D006144 ORTHO05D006357 5.6e-202 709.1 1334 36.9
Eucgr.H01999 Eucalyptus grandis HOM05D006144 ORTHO05D006357 6.1e-201 705.7 1329 36.6
Glyma.11G057500 Glycine max HOM05D006144 ORTHO05D006357 2.0e-199 700.7 1308 36.8
Glyma.01G184700 Glycine max HOM05D006144 ORTHO05D006357 2.9e-198 696.8 1315 37.2
CsaV3_6G043130 Cucumis sativus L. HOM05D006144 ORTHO05D006357 1.4e-197 694.5 1313 37.0
ClCG01G016710 Citrullus lanatus HOM05D006144 ORTHO05D006357 8.6e-195 685.3 1325 36.8
Phvul.002G020300 Phaseolus vulgaris HOM05D006144 ORTHO05D006357 6.4e-190 669.1 1313 35.6
VMungo1215G0092 Vigna mungo HOM05D006144 ORTHO05D006357 9.2e-189 665.2 1310 36.3
MELO3C007550.2 Cucumis melo HOM05D006144 ORTHO05D006357 1.6e-188 664.5 1177 37.7
Sed0018548 Sechium edule HOM05D006144 ORTHO05D006357 3.9e-187 659.8 1300 36.2
PGR102G0121 Punica granatum HOM05D006144 ORTHO05D006357 8.9e-184 648.7 1247 36.2
Lj2g0024358 Lotus japonicus HOM05D006144 ORTHO05D006357 5.8e-183 646.0 1312 35.8
Ca_24781_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 1.7e-182 644.4 1298 35.3
arahy.Tifrunner.gnm1.ann1.AH11HU Arachis hypogaea HOM05D006144 ORTHO05D006357 2.2e-182 644.0 1244 36.9
arahy.Tifrunner.gnm1.ann1.IY5EPV Arachis hypogaea HOM05D006144 ORTHO05D006357 2.2e-182 644.0 1241 36.7
TPR.G31101 Trifolium pratense HOM05D006144 ORTHO05D006357 3.9e-179 633.3 1319 35.2
Psat0s3889g0080 Pisum sativum HOM05D006144 ORTHO05D006357 4.3e-178 629.8 1307 35.0
Lalb_Chr16g0388301 Lupinus albus HOM05D006144 ORTHO05D006357 2.3e-176 624.0 1315 34.0
GSVIVG01002633001 Vitis vinifera HOM05D006144 ORTHO05D006357 9.6e-170 602.1 697 52.2
MBI06_g08189_MAGBIO Magnolia biondii HOM05D006144 ORTHO05D006357 1.1e-168 598.6 1349 33.6
TAR381G1042 Trochodendron aralioides HOM05D006144 ORTHO05D006357 6.4e-166 589.3 716 48.9
Hund13563 Selenicereus undatus HOM05D006144 ORTHO05D006357 6.0e-164 582.8 1317 33.4
Lalb_Chr09g0333701 Lupinus albus HOM05D006144 ORTHO05D006357 5.6e-162 576.2 1342 33.2
Lj4C140T7 Lonicera japonica HOM05D006144 ORTHO05D006357 3.6e-161 573.5 690 50.7
Sc03g0001430 Simmondsia chinensis HOM05D006144 ORTHO05D006357 9.3e-157 558.9 1318 33.2
THA.LOC104826201 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 1.8e-155 554.7 1315 33.0
HPP92_004081 Vanilla planifolia HOM05D006144 ORTHO05D006357 8.2e-145 519.2 1264 32.6
EL10Ac6g15152 Beta vulgaris HOM05D006144 ORTHO05D006357 6.7e-139 499.6 1305 30.7
ATR0104G015 Amborella trichopoda HOM05D006144 ORTHO05D006357 2.8e-137 494.2 1330 30.4
Os03g0186500 Oryza sativa ssp. japonica HOM05D006144 ORTHO05D006357 8.2e-137 492.7 1145 33.1
MSTRG.23764 Avicennia marina HOM05D006144 ORTHO05D006357 8.5e-134 482.6 1193 34.8
THA.LOC104804508 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 3.2e-133 480.7 1070 33.6
AUR62003855 Chenopodium quinoa HOM05D006144 ORTHO05D006357 3.0e-131 474.2 1325 30.4
Ah.03g144510 Amaranthus hybridus HOM05D006144 ORTHO05D006357 1.1e-128 465.7 1292 30.3
Cpa.g.sc55.182 Carica papaya HOM05D006144 ORTHO05D006357 6.9e-128 463.0 704 42.6
Zm00001eb006470 Zea mays HOM05D006144 ORTHO05D006357 9.1e-128 462.6 1169 33.5
ECA232G0891 Erigeron canadensis HOM05D006144 ORTHO05D006357 1.5e-127 461.8 1228 30.1
AUR62001952 Chenopodium quinoa HOM05D006144 ORTHO05D006357 1.9e-125 454.9 1146 31.8
HanXRQChr14g0430551 Helianthus annuus HOM05D006144 ORTHO05D006357 2.5e-125 454.5 1159 30.4
Lsat_1_v5_gn_4_167780 Lactuca sativa HOM05D006144 ORTHO05D006357 9.7e-122 442.6 1283 28.5
PSO675G0817 Papaver somniferum HOM05D006144 ORTHO05D006357 3.4e-119 434.1 719 42.1
CDE03G0440 Ceratophyllum demersum HOM05D006144 ORTHO05D006357 4.2e-117 427.2 1296 29.2
Lj4A140T30 Lonicera japonica HOM05D006144 ORTHO05D006357 8.8e-115 419.5 471 46.9
PSO541G4136 Papaver somniferum HOM05D006144 ORTHO05D006357 4.1e-104 384.0 721 39.1
TAR381G0606 Trochodendron aralioides HOM05D006144 ORTHO05D006357 9.4e-101 372.9 469 43.1
unitig_736.g22372 Utricularia gibba HOM05D006144 ORTHO05D006357 1.8e-99 368.6 688 39.0
Hma1.2p1_1415F.1_g282000 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 1.3e-94 352.4 672 39.7
Ca_22186_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 1.7e-94 352.1 696 37.6
Cpa.g.sc55.178 Carica papaya HOM05D006144 ORTHO05D006357 2.3e-91 341.7 447 42.5
Psat4g089200 Pisum sativum HOM05D006144 ORTHO05D006357 1.2e-87 329.3 690 36.2
TPR.G640 Trifolium pratense HOM05D006144 ORTHO05D006357 4.0e-83 314.3 369 48.8
HPP92_004109 Vanilla planifolia HOM05D006144 ORTHO05D006357 3.5e-71 274.6 704 29.7
SEGI_17223 Sequoiadendron giganteum HOM05D006144 ORTHO05D006357 6.6e-54 217.2 887 26.9
SEGI_14166 Sequoiadendron giganteum HOM05D006144 ORTHO05D006357 9.6e-53 213.4 466 31.1
Mapoly0063s0038 Marchantia polymorpha HOM05D006144 ORTHO05D006357 8.4e-49 200.3 1014 23.7
Mapoly0063s0034 Marchantia polymorpha HOM05D006144 ORTHO05D006357 2.5e-45 188.7 973 23.6
AUR62039591 Chenopodium quinoa HOM05D006144 ORTHO05D006357 7.4e-37 160.6 286 36.4
AUR62013383 Chenopodium quinoa HOM05D006144 ORTHO05D006017 4.8e-36 157.9 239 39.3
SMO301G0037 Selaginella moellendorffii HOM05D006144 ORTHO05D006357 3.2e-32 145.2 985 21.4
unitig_736.g22374 Utricularia gibba HOM05D006144 ORTHO05D006357 3.1e-27 128.6 211 39.3
Aa31LG1G15380 Aethionema arabicum HOM05D012861 ORTHO05D006357 8.4e-25 120.6 574 28.4
AT5G66820 Arabidopsis thaliana HOM05D012861 ORTHO05D006357 7.4e-21 107.5 572 27.3
Dinv29968 Davidia involucrata HOM05D000370 ORTHO05D001366 1.7e-17 96.3 113 48.7
CBR_g31222 Chara braunii HOM05D006144 ORTHO05D006357 1.2e-15 90.1 153 33.3
Pp3c4_25960 Physcomitrium patens HOM05D006144 ORTHO05D006357 1.3e-12 80.1 250 28.4
AL8G44580 Arabidopsis lyrata HOM05D012861 ORTHO05D006357 7.7e-10 70.9 375 26.9
Sp2g29830 Schrenkiella parvula HOM05D012861 ORTHO05D006357 1.0e-09 70.5 261 29.1
MCO09G582 Micromonas commoda HOM05D006144 ORTHO05D006357 1.4e-08 66.6 134 31.3
Sabra05G0109100 Salix brachista HOM05D006144 ORTHO05D006357 1.4e-08 66.6 81 44.4
CARHR280840 Cardamine hirsuta HOM05D012861 ORTHO05D006357 1.2e-07 63.5 252 26.2
unitig_736.g22373 Utricularia gibba HOM05D006144 ORTHO05D006357 2.7e-07 62.4 128 28.1
Thhalv10004001m.g Eutrema salsugineum HOM05D012861 ORTHO05D006357 1.4e-06 60.1 256 27.0
AagrBONN_evm.TU.Sc2ySwM_228.442 Anthoceros agrestis HOM05D006144 ORTHO05D006357 3.0e-06 58.9 303 21.1
Sabra05G0109200 Salix brachista HOM05D006144 ORTHO05D006357 5.1e-06 58.2 194 27.8
Carub.0008s2766 Capsella rubella HOM05D012861 ORTHO05D006357 8.8e-06 57.4 499 25.1


User provided reference genes

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