Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu004742.1 Olea europaea HOM05D003880 ORTHO05D004959 5.3e-122 441.0 222 100.0
Oeu004740.1 Olea europaea HOM05D003880 ORTHO05D004959 2.4e-90 335.9 173 97.1
Oeu025391.1 Olea europaea HOM05D003880 ORTHO05D004959 3.9e-40 169.1 170 57.6
Migut.C01288 Erythranthe guttata HOM05D003880 ORTHO05D004959 3.4e-36 156.0 228 48.7
Migut.N03362 Erythranthe guttata HOM05D003880 ORTHO05D004959 7.5e-36 154.8 222 49.1
Migut.O00683 Erythranthe guttata HOM05D003880 ORTHO05D004959 7.5e-36 154.8 222 49.1
MSTRG.1545 Avicennia marina HOM05D003880 ORTHO05D004959 1.7e-35 153.7 225 47.6
SalBow6G4536 Salvia bowleyana HOM05D003880 ORTHO05D004959 2.7e-33 146.4 218 46.8
SalBow6G5395 Salvia bowleyana HOM05D003880 ORTHO05D004959 1.0e-32 144.4 218 46.3
Solyc11g020780.2 Solanum lycopersicum HOM05D003880 ORTHO05D004959 2.3e-32 143.3 231 43.7
Sopen11g010860 Solanum pennellii HOM05D003880 ORTHO05D004959 1.1e-31 141.0 231 43.3
TAR628G0517 Trochodendron aralioides HOM05D003880 ORTHO05D004959 1.8e-29 133.7 229 45.4
Actinidia02567 Actinidia chinensis HOM05D003880 ORTHO05D004959 2.0e-28 130.2 237 40.5
PGSC0003DMG400009278 Solanum tuberosum HOM05D003880 ORTHO05D004959 2.0e-28 130.2 225 40.9
Dinv02585 Davidia involucrata HOM05D003880 ORTHO05D004959 2.6e-28 129.8 254 39.8
CAN.G259.4 Capsicum annuum HOM05D003880 ORTHO05D004959 4.4e-28 129.0 224 42.0
Actinidia23014 Actinidia chinensis HOM05D003880 ORTHO05D004959 5.8e-28 128.6 240 40.8
Dinv41735 Davidia involucrata HOM05D003880 ORTHO05D004959 2.9e-27 126.3 230 40.9
SGA_v2.0_scaffold149G36569 Striga asiatica HOM05D003880 ORTHO05D004959 6.4e-27 125.2 220 42.3
Actinidia05639 Actinidia chinensis HOM05D003880 ORTHO05D004959 8.4e-27 124.8 217 41.0
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 4.1e-26 122.5 221 43.0
SGA_v2.0_scaffold24G10581 Striga asiatica HOM05D003880 ORTHO05D004959 5.4e-26 122.1 227 42.7
MD05G1093300 Malus domestica HOM05D003880 ORTHO05D004959 9.2e-26 121.3 231 41.6
Nitab4.5_0000167g0290 Nicotiana tabacum HOM05D003880 ORTHO05D004959 9.2e-26 121.3 236 43.2
SalBow7G4466 Salvia bowleyana HOM05D003880 ORTHO05D004959 2.1e-25 120.2 212 42.9
Lsat_1_v5_gn_1_10140 Lactuca sativa HOM05D003880 ORTHO05D004959 3.0e-24 116.3 251 39.8
Ah.05g178350 Amaranthus hybridus HOM05D003880 ORTHO05D004959 3.9e-24 115.9 225 37.8
CsaV3_5G040400 Cucumis sativus L. HOM05D003880 ORTHO05D004959 5.1e-24 115.5 239 40.2
Prupe.1G551200 Prunus persica HOM05D003880 ORTHO05D004959 6.6e-24 115.2 236 39.0
Sc23g0001360 Simmondsia chinensis HOM05D003880 ORTHO05D004959 1.5e-23 114.0 213 41.3
MELO3C022212.2 Cucumis melo HOM05D003880 ORTHO05D004959 9.6e-23 111.3 240 39.2
unitig_747.g21476 Utricularia gibba HOM05D003880 ORTHO05D004959 9.6e-23 111.3 222 41.9
TWI14G0176 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 2.8e-22 109.8 230 40.4
MD10G1100400 Malus domestica HOM05D003880 ORTHO05D004959 4.7e-22 109.0 233 39.5
unitig_0.g2129 Utricularia gibba HOM05D003880 ORTHO05D004959 6.2e-22 108.6 224 40.2
Nn5g27605 Nelumbo nucifera HOM05D003880 ORTHO05D004959 8.1e-22 108.2 249 37.8
TWI59G0907 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 1.4e-21 107.5 234 39.7
AUR62004625 Chenopodium quinoa HOM05D003880 ORTHO05D004959 1.8e-21 107.1 250 38.4
ClCG08G000380 Citrullus lanatus HOM05D003880 ORTHO05D004959 1.8e-21 107.1 248 39.1
FAN18G3221 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.8e-21 107.1 238 38.7
Cc00_g06530 Coffea canephora HOM05D003880 ORTHO05D004959 2.4e-21 106.7 194 41.8
PSO063G4997 Papaver somniferum HOM05D003880 ORTHO05D004959 2.4e-21 106.7 220 37.3
Sabra19G0093200 Salix brachista HOM05D003880 ORTHO05D004959 3.1e-21 106.3 226 37.6
Lsat_1_v5_gn_4_136101 Lactuca sativa HOM05D003880 ORTHO05D004959 6.9e-21 105.1 151 42.4
PSO017G2071 Papaver somniferum HOM05D003880 ORTHO05D004959 6.9e-21 105.1 222 37.4
Hund16787 Selenicereus undatus HOM05D003880 ORTHO05D004959 1.2e-20 104.4 244 36.5
Potri.013G109400 Populus trichocarpa HOM05D003880 ORTHO05D004959 2.0e-20 103.6 229 37.1
Peaxi162Scf00391g00533 Petunia axillaris HOM05D003880 ORTHO05D004959 3.4e-20 102.8 145 44.8
PGR042G0805 Punica granatum HOM05D003880 ORTHO05D004959 3.4e-20 102.8 242 36.8
Atru.chr13.2392 Acer truncatum HOM05D003880 ORTHO05D004959 7.6e-20 101.7 216 38.9
HanXRQChr09g0260531 Helianthus annuus HOM05D003880 ORTHO05D004959 7.6e-20 101.7 226 37.2
Eucgr.F02584 Eucalyptus grandis HOM05D003880 ORTHO05D004959 1.3e-19 100.9 242 37.2
Rhsim06G0088000 Rhododendron simsii HOM05D003880 ORTHO05D004959 2.2e-19 100.1 242 38.4
Potri.019G081600 Populus trichocarpa HOM05D003880 ORTHO05D004959 3.8e-19 99.4 226 37.2
Manes.18G103500 Manihot esculenta HOM05D003880 ORTHO05D004959 8.4e-19 98.2 225 35.6
Manes.02G194600 Manihot esculenta HOM05D003880 ORTHO05D004959 1.9e-18 97.1 243 37.4
Cpa.g.sc66.21 Carica papaya HOM05D003880 ORTHO05D004959 2.4e-18 96.7 252 36.9
Gorai.006G130000 Gossypium raimondii HOM05D003880 ORTHO05D004959 3.2e-18 96.3 213 38.5
CiPaw.03G019400 Carya illinoinensis HOM05D003880 ORTHO05D004959 5.4e-18 95.5 138 43.5
Gohir.D09G112200 Gossypium hirsutum HOM05D003880 ORTHO05D004959 2.1e-17 93.6 212 36.8
CANSAT11G2580 Cannabis sativa HOM05D003880 ORTHO05D004959 2.7e-17 93.2 230 36.1
RcHm_v2.0_Chr7g0228851 Rosa chinensis HOM05D003880 ORTHO05D004959 2.7e-17 93.2 231 35.1
AUR62023520 Chenopodium quinoa HOM05D003880 ORTHO05D004959 3.5e-17 92.8 181 39.8
GSVIVG01012776001 Vitis vinifera HOM05D003880 ORTHO05D004959 7.8e-17 91.7 158 43.0
Cfa008134 Carpinus fangiana HOM05D003880 ORTHO05D004959 1.7e-16 90.5 213 35.7
FvH4_5g32350 Fragaria vesca HOM05D003880 ORTHO05D004959 1.7e-16 90.5 238 35.7
vmacro12476 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 1.7e-16 90.5 189 39.2
FAN08G3431 Fragaria x ananassa HOM05D003880 ORTHO05D004959 3.0e-16 89.7 243 35.0
Gohir.A09G115400 Gossypium hirsutum HOM05D003880 ORTHO05D004959 5.1e-16 89.0 213 38.5
vmacro00757 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 5.1e-16 89.0 227 37.0
Lj7A289G27 Lonicera japonica HOM05D003880 ORTHO05D004959 8.7e-16 88.2 165 40.0
Sabra13G0094300 Salix brachista HOM05D003880 ORTHO05D004959 8.7e-16 88.2 230 34.3
HanXRQChr11g0326071 Helianthus annuus HOM05D003880 ORTHO05D004959 1.1e-15 87.8 232 33.2
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 1.5e-15 87.4 156 40.4
Ciclev10000797m.g Citrus clementina HOM05D003880 ORTHO05D004959 3.3e-15 86.3 113 44.2
FAN04G0842 Fragaria x ananassa HOM05D003880 ORTHO05D004959 3.3e-15 86.3 237 35.4
FAN04G1012 Fragaria x ananassa HOM05D003880 ORTHO05D004959 3.3e-15 86.3 237 35.4
QL09p004950 Quercus lobata HOM05D003880 ORTHO05D004959 3.3e-15 86.3 190 35.8
Thecc.08G186500 Theobroma cacao HOM05D003880 ORTHO05D004959 3.3e-15 86.3 82 58.5
FAN13G2674 Fragaria x ananassa HOM05D003880 ORTHO05D004959 4.3e-15 85.9 238 35.3
Aqoxy4G01178 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 5.6e-15 85.5 240 34.2
Duzib177G0936 Durio zibethinus HOM05D003880 ORTHO05D004959 5.6e-15 85.5 75 60.0
Lj4A481T13 Lonicera japonica HOM05D003880 ORTHO05D004959 2.1e-14 83.6 181 37.0
COL.COLO4_12797 Corchorus olitorius HOM05D003880 ORTHO05D004959 4.8e-14 82.4 80 56.2
Carub.0002s1882 Capsella rubella HOM05D003880 ORTHO05D004959 6.2e-14 82.0 134 42.5
Aa31LG4G10790 Aethionema arabicum HOM05D003880 ORTHO05D004959 1.4e-13 80.9 209 35.9
Duzib116G0170 Durio zibethinus HOM05D003880 ORTHO05D004959 1.4e-13 80.9 223 34.5
Carub.0001s2216 Capsella rubella HOM05D003880 ORTHO05D004959 1.8e-13 80.5 171 36.8
MBI17_g21473_MAGBIO Magnolia biondii HOM05D003880 ORTHO05D004959 1.8e-13 80.5 236 35.2
Hma1.2p1_0004F.1_g004030 Hydrangea macrophylla HOM05D003880 ORTHO05D004959 5.3e-13 79.0 267 30.3
BcaC08g46654 Brassica carinata HOM05D003880 ORTHO05D004959 6.9e-13 78.6 229 33.2
BolC6t39667H Brassica oleracea HOM05D003880 ORTHO05D004959 6.9e-13 78.6 229 33.2
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 6.9e-13 78.6 142 37.3
DCAR_011525 Daucus carota HOM05D003880 ORTHO05D004959 9.0e-13 78.2 155 39.4
Thhalv10018309m.g Eutrema salsugineum HOM05D003880 ORTHO05D004959 9.0e-13 78.2 244 32.8
DCAR_001082 Daucus carota HOM05D003880 ORTHO05D004959 2.6e-12 76.6 66 63.6
BraA07t31387Z Brassica rapa HOM05D003880 ORTHO05D004959 3.4e-12 76.3 231 32.5
EL10Ac1g00108 Beta vulgaris HOM05D003880 ORTHO05D004959 4.5e-12 75.9 240 31.7
C06p46140 Brassica napus HOM05D003880 ORTHO05D004959 7.6e-12 75.1 221 33.0
HPP92_019380 Vanilla planifolia HOM05D003880 ORTHO05D004959 9.9e-12 74.7 101 46.5
HPP92_027627 Vanilla planifolia HOM05D003880 ORTHO05D004959 9.9e-12 74.7 101 46.5
A07p38210 Brassica napus HOM05D003880 ORTHO05D004959 1.3e-11 74.3 228 32.0
CARHR064840 Cardamine hirsuta HOM05D003880 ORTHO05D004959 1.3e-11 74.3 234 32.5
Sp5g27110 Schrenkiella parvula HOM05D003880 ORTHO05D004959 1.3e-11 74.3 259 32.4
Sed0018926 Sechium edule HOM05D003880 ORTHO05D004959 2.2e-11 73.6 63 63.5
Glyma.06G324700 Glycine max HOM05D003880 ORTHO05D004959 4.9e-11 72.4 215 33.0
arahy.Tifrunner.gnm1.ann1.HC95SM Arachis hypogaea HOM05D003880 ORTHO05D004959 6.4e-11 72.0 77 51.9
Glyma.04G256800 Glycine max HOM05D003880 ORTHO05D004959 8.4e-11 71.6 72 54.2
CiPaw.04G012900 Carya illinoinensis HOM05D003880 ORTHO05D004959 1.1e-10 71.2 40 77.5
Os01g0874100 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 1.1e-10 71.2 89 49.4
Phvul.005G000500 Phaseolus vulgaris HOM05D003880 ORTHO05D004959 1.4e-10 70.9 65 55.4
Lj3g0009516 Lotus japonicus HOM05D003880 ORTHO05D004959 1.9e-10 70.5 222 29.3
BcaB03g14926 Brassica carinata HOM05D003880 ORTHO05D004959 2.4e-10 70.1 240 29.6
THA.LOC104800120 Tarenaya hassleriana HOM05D003880 ORTHO05D004959 2.4e-10 70.1 241 34.0
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea HOM05D003880 ORTHO05D004959 3.2e-10 69.7 94 47.9
CDE04G1975 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 3.2e-10 69.7 40 77.5
VMungo1080G1836 Vigna mungo HOM05D003880 ORTHO05D004959 4.2e-10 69.3 69 53.6
Rhsim01G0139900 Rhododendron simsii HOM05D002321 ORTHO05D006445 5.4e-10 68.9 60 61.7
Psat1g000520 Pisum sativum HOM05D003880 ORTHO05D004959 1.2e-09 67.8 55 63.6
CDE04G1100 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 2.1e-09 67.0 85 45.9
Lalb_Chr09g0332911 Lupinus albus HOM05D003880 ORTHO05D004959 2.1e-09 67.0 175 33.7
Zm00001eb146250 Zea mays HOM05D003880 ORTHO05D004959 2.1e-09 67.0 63 55.6
Zm00001eb348750 Zea mays HOM05D003880 ORTHO05D004959 3.5e-09 66.2 112 42.0
BcaC03g15327 Brassica carinata HOM05D003880 ORTHO05D004959 4.6e-09 65.9 85 48.2
C02p29320 Brassica napus HOM05D003880 ORTHO05D004959 4.6e-09 65.9 85 48.2
BolC2t08983H Brassica oleracea HOM05D003880 ORTHO05D004959 4.6e-09 65.9 85 48.2
Ca_13965_v3 Cicer arietinum L. HOM05D003880 ORTHO05D004959 4.6e-09 65.9 36 80.6
AL2G31670 Arabidopsis lyrata HOM05D003880 ORTHO05D004959 6.0e-09 65.5 239 30.5
Lalb_Chr05g0224761 Lupinus albus HOM05D003880 ORTHO05D004959 6.0e-09 65.5 41 73.2
ATR0661G349 Amborella trichopoda HOM05D003880 ORTHO05D004959 7.9e-09 65.1 221 33.5
BcaB05g24701 Brassica carinata HOM05D003880 ORTHO05D004959 7.9e-09 65.1 108 37.0
TAR624G1033 Trochodendron aralioides HOM05D003880 ORTHO05D415972 7.9e-09 65.1 155 32.3
Aqoxy7G03411 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 1.0e-08 64.7 37 81.1
Medtr3g005360 Medicago truncatula HOM05D003880 ORTHO05D004959 1.0e-08 64.7 35 82.9
TPR.G25498 Trifolium pratense HOM05D003880 ORTHO05D004959 1.0e-08 64.7 35 82.9
CDE04G1048 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 1.8e-08 63.9 124 34.7
A02p17640 Brassica napus HOM05D003880 ORTHO05D004959 2.3e-08 63.5 61 54.1
BraA02t06810Z Brassica rapa HOM05D003880 ORTHO05D004959 2.3e-08 63.5 61 54.1
AT1G72040 Arabidopsis thaliana HOM05D003880 ORTHO05D004959 5.1e-08 62.4 43 69.8
Os05g0430200 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 8.7e-08 61.6 37 73.0
HPP92_019377 Vanilla planifolia HOM05D003880 ORTHO05D004959 2.5e-07 60.1 32 84.4


User provided reference genes

Program Settings