Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu004690.1 Olea europaea HOM05D007537 ORTHO05D009602 1.9e-53 212.2 104 100.0
Cc02_g06360 Coffea canephora HOM05D007537 ORTHO05D009602 9.6e-26 120.2 101 63.4
Dinv21742 Davidia involucrata HOM05D007537 ORTHO05D009602 3.1e-24 115.2 104 60.6
Actinidia13942 Actinidia chinensis HOM05D007537 ORTHO05D009602 3.4e-23 111.7 105 59.0
CSS0034530 Camellia sinensis var. sinensis HOM05D007537 ORTHO05D009602 1.0e-22 110.2 106 60.4
CSS0001440 Camellia sinensis var. sinensis HOM05D007537 ORTHO05D009602 2.2e-22 109.0 114 57.0
MSTRG.27338 Avicennia marina HOM05D007537 ORTHO05D009602 2.9e-22 108.6 115 55.7
vmacro10037 Vaccinium macrocarpon HOM05D007537 ORTHO05D009602 8.4e-22 107.1 107 57.9
CSS0047961 Camellia sinensis var. sinensis HOM05D007537 ORTHO05D009602 1.4e-21 106.3 114 57.0
Lsat_1_v5_gn_8_12620 Lactuca sativa HOM05D007537 ORTHO05D009602 1.9e-21 105.9 105 58.1
Peaxi162Scf00284g01051 Petunia axillaris HOM05D007537 ORTHO05D009602 2.5e-21 105.5 111 54.1
VMungo0647G0018 Vigna mungo HOM05D007537 ORTHO05D009602 3.2e-21 105.1 102 58.8
LjContig00357g0012610 Lotus japonicus HOM05D007537 ORTHO05D009602 9.3e-21 103.6 108 56.5
Nitab4.5_0000797g0160 Nicotiana tabacum HOM05D007537 ORTHO05D009602 1.2e-20 103.2 109 53.2
Cfa001307 Carpinus fangiana HOM05D007537 ORTHO05D009602 1.6e-20 102.8 104 58.7
Sabra08G0051400 Salix brachista HOM05D007537 ORTHO05D009602 4.6e-20 101.3 109 56.0
COL.COLO4_25746 Corchorus olitorius HOM05D007537 ORTHO05D009602 6.1e-20 100.9 111 53.2
Migut.F00693 Erythranthe guttata HOM05D007537 ORTHO05D009602 1.8e-19 99.4 105 56.2
Glyma.02G257900 Glycine max HOM05D007537 ORTHO05D009602 1.8e-19 99.4 107 49.5
Prupe.2G251400 Prunus persica HOM05D007537 ORTHO05D009602 1.8e-19 99.4 114 52.6
HanXRQChr08g0221761 Helianthus annuus HOM05D007537 ORTHO05D009602 2.3e-19 99.0 104 56.7
Ca_05971_v3 Cicer arietinum L. HOM05D007537 ORTHO05D009602 3.0e-19 98.6 102 52.0
Ca_05972_v3 Cicer arietinum L. HOM05D007537 ORTHO05D009602 3.0e-19 98.6 102 52.0
TPR.G38413 Trifolium pratense HOM05D007537 ORTHO05D009602 3.0e-19 98.6 102 52.9
Medtr5g082850 Medicago truncatula HOM05D007537 ORTHO05D009602 3.9e-19 98.2 104 52.9
arahy.Tifrunner.gnm1.ann1.EU49LP Arachis hypogaea HOM05D007537 ORTHO05D009602 5.1e-19 97.8 99 54.5
Duzib114G0965 Durio zibethinus HOM05D007537 ORTHO05D009602 6.7e-19 97.4 104 53.8
Manes.07G130900 Manihot esculenta HOM05D007537 ORTHO05D009602 6.7e-19 97.4 110 53.6
Psat2g031640 Pisum sativum HOM05D007537 ORTHO05D009602 6.7e-19 97.4 104 53.8
TAR633G2636 Trochodendron aralioides HOM05D007537 ORTHO05D009602 6.7e-19 97.4 102 56.9
Sopen06g017350 Solanum pennellii HOM05D007537 ORTHO05D009602 8.7e-19 97.1 110 52.7
Thecc.10G014900 Theobroma cacao HOM05D007537 ORTHO05D009602 1.5e-18 96.3 106 52.8
Atru.chr12.52 Acer truncatum HOM05D007537 ORTHO05D009602 1.9e-18 95.9 116 50.0
arahy.Tifrunner.gnm1.ann1.QLS93X Arachis hypogaea HOM05D007537 ORTHO05D009602 1.9e-18 95.9 103 52.4
Ciclev10031789m.g Citrus clementina HOM05D007537 ORTHO05D009602 3.3e-18 95.1 118 53.4
Gohir.D13G016000 Gossypium hirsutum HOM05D007537 ORTHO05D009602 4.3e-18 94.7 104 52.9
Gorai.013G017500 Gossypium raimondii HOM05D007537 ORTHO05D009602 4.3e-18 94.7 104 52.9
CiPaw.01G299800 Carya illinoinensis HOM05D007537 ORTHO05D009602 5.7e-18 94.4 113 48.7
Potri.008G069800 Populus trichocarpa HOM05D007537 ORTHO05D009602 5.7e-18 94.4 108 52.8
PGR044G1397 Punica granatum HOM05D007537 ORTHO05D009602 5.7e-18 94.4 114 50.9
SGA_v2.0_scaffold44G16701 Striga asiatica HOM05D007537 ORTHO05D009602 5.7e-18 94.4 104 53.8
DCAR_011821 Daucus carota HOM05D007537 ORTHO05D009602 9.7e-18 93.6 102 51.0
THA.LOC104823184 Tarenaya hassleriana HOM05D007537 ORTHO05D009602 9.7e-18 93.6 107 53.3
EL10Ac2g04847 Beta vulgaris HOM05D007537 ORTHO05D009602 1.3e-17 93.2 121 47.1
Solyc06g051360.3 Solanum lycopersicum HOM05D007537 ORTHO05D009602 2.2e-17 92.4 110 50.0
PGSC0003DMG400024236 Solanum tuberosum HOM05D007537 ORTHO05D009602 2.8e-17 92.0 115 47.8
ECA233G1171 Erigeron canadensis HOM05D007537 ORTHO05D009602 3.7e-17 91.7 104 53.8
Nitab4.5_0008231g0020 Nicotiana tabacum HOM05D007537 ORTHO05D009602 4.8e-17 91.3 111 47.7
ClCG07G004310 Citrullus lanatus HOM05D007537 ORTHO05D009602 6.3e-17 90.9 105 50.5
Rhsim09G0177700 Rhododendron simsii HOM05D007537 ORTHO05D009602 1.8e-16 89.4 110 51.8
Os01g0830500 Oryza sativa ssp. japonica HOM05D007537 ORTHO05D009602 4.1e-16 88.2 108 48.1
AUR62022900 Chenopodium quinoa HOM05D007537 ORTHO05D009602 5.3e-16 87.8 132 43.9
Sed0013636 Sechium edule HOM05D007537 ORTHO05D009602 5.3e-16 87.8 101 54.5
Haze_17238 Corylus avellana HOM05D007537 ORTHO05D009602 6.9e-16 87.4 95 55.8
Phvul.008G223100 Phaseolus vulgaris HOM05D007537 ORTHO05D009602 9.0e-16 87.0 105 47.6
FAN01G2979 Fragaria x ananassa HOM05D007537 ORTHO05D009602 2.0e-15 85.9 122 42.6
FAN06G1236 Fragaria x ananassa HOM05D007537 ORTHO05D009602 2.0e-15 85.9 122 44.3
FAN10G0956 Fragaria x ananassa HOM05D007537 ORTHO05D009602 2.6e-15 85.5 124 42.7
Hund13875 Selenicereus undatus HOM05D007537 ORTHO05D009602 2.6e-15 85.5 132 41.7
AUR62012265 Chenopodium quinoa HOM05D007537 ORTHO05D009602 3.4e-15 85.1 133 42.1
FAN03G1922 Fragaria x ananassa HOM05D007537 ORTHO05D009602 4.5e-15 84.7 124 42.7
BcaB04g21148 Brassica carinata HOM05D007537 ORTHO05D009602 1.0e-14 83.6 103 49.5
Lalb_Chr04g0250531 Lupinus albus HOM05D007537 ORTHO05D009602 1.0e-14 83.6 108 45.4
RcHm_v2.0_Chr1g0370441 Rosa chinensis HOM05D007537 ORTHO05D009602 1.7e-14 82.8 131 42.7
Nn2g10869 Nelumbo nucifera HOM05D007537 ORTHO05D009602 2.2e-14 82.4 128 45.3
FvH4_7g24610 Fragaria vesca HOM05D007537 ORTHO05D009602 2.9e-14 82.0 122 43.4
BolC1t05333H Brassica oleracea HOM05D007537 ORTHO05D009602 3.8e-14 81.6 103 48.5
BraA01t04198Z Brassica rapa HOM05D007537 ORTHO05D009602 3.8e-14 81.6 103 48.5
Aqoxy2G00863 Aquilegia oxysepala HOM05D007537 ORTHO05D009602 5.0e-14 81.3 104 45.2
MBI03_g40958_MAGBIO Magnolia biondii HOM05D007537 ORTHO05D009602 5.0e-14 81.3 107 44.9
Sc10g0002440 Simmondsia chinensis HOM05D007537 ORTHO05D009602 6.5e-14 80.9 122 43.4
PSO384G1417 Papaver somniferum HOM05D007537 ORTHO05D009602 1.9e-13 79.3 136 44.1
BcaC09g48157 Brassica carinata HOM05D007537 ORTHO05D009602 7.2e-13 77.4 103 47.6
CARHR085730 Cardamine hirsuta HOM05D007537 ORTHO05D009602 1.6e-12 76.3 106 48.1
Carub.0003s1045 Capsella rubella HOM05D007537 ORTHO05D009602 2.1e-12 75.9 104 44.2
Aa31LG3G4310 Aethionema arabicum HOM05D007537 ORTHO05D009602 6.1e-12 74.3 103 42.7
Thhalv10020993m.g Eutrema salsugineum HOM05D007537 ORTHO05D009602 7.9e-12 73.9 103 44.7
HPP92_007582 Vanilla planifolia HOM05D007537 ORTHO05D009602 1.0e-11 73.6 99 43.4
Eucgr.J00197 Eucalyptus grandis HOM05D007537 ORTHO05D009602 1.8e-11 72.8 126 42.1
Ah.10g036610 Amaranthus hybridus HOM05D007537 ORTHO05D009602 8.8e-11 70.5 116 41.4
AT3G11150 Arabidopsis thaliana HOM05D007537 ORTHO05D009602 8.8e-11 70.5 105 41.9
AL3G22670 Arabidopsis lyrata HOM05D007537 ORTHO05D009602 1.1e-10 70.1 104 40.4
Sp3g09450 Schrenkiella parvula HOM05D007537 ORTHO05D009602 2.0e-10 69.3 106 42.5
MD01G1154400 Malus domestica HOM05D007537 ORTHO05D009602 3.8e-06 55.1 62 46.8


User provided reference genes

Program Settings