Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu004640.1 Olea europaea HOM05D007595 ORTHO05D009570 3.3e-223 778.5 526 100.0
Dinv44032 Davidia involucrata HOM05D007595 ORTHO05D009570 3.8e-70 270.0 447 52.3
MBI04_g20744_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D001765 2.6e-66 257.3 449 49.7
Cc02_g25530 Coffea canephora HOM05D007595 ORTHO05D009570 9.1e-64 248.8 179 67.0
Duzib138G0502 Durio zibethinus HOM05D007595 ORTHO05D009570 4.2e-61 240.0 174 64.9
Lj9C550T12 Lonicera japonica HOM05D007595 ORTHO05D009570 9.4e-61 238.8 628 47.8
ClCG05G002930 Citrullus lanatus HOM05D007595 ORTHO05D009570 2.1e-60 237.7 554 50.7
CiPaw.13G022600 Carya illinoinensis HOM05D007595 ORTHO05D009570 3.6e-60 236.9 175 63.4
QL04p026468 Quercus lobata HOM05D007595 ORTHO05D009570 6.1e-60 236.1 175 64.6
MD02G1222500 Malus domestica HOM05D007595 ORTHO05D009570 2.3e-59 234.2 179 62.0
Potri.014G052800 Populus trichocarpa HOM05D007595 ORTHO05D009570 8.8e-59 232.3 178 60.1
Haze_02895 Corylus avellana HOM05D007595 ORTHO05D009570 2.0e-58 231.1 451 53.7
Atru.chr5.81 Acer truncatum HOM05D007595 ORTHO05D009570 7.5e-58 229.2 179 60.3
Cfa011030 Carpinus fangiana HOM05D007595 ORTHO05D009570 7.5e-58 229.2 175 64.0
COL.COLO4_12359 Corchorus olitorius HOM05D007595 ORTHO05D009570 9.7e-58 228.8 178 60.1
Prupe.1G180300 Prunus persica HOM05D007595 ORTHO05D009570 9.7e-58 228.8 179 59.8
SalBow5G3719 Salvia bowleyana HOM05D007595 ORTHO05D009570 1.3e-57 228.4 178 64.0
Sabra14G0039800 Salix brachista HOM05D007595 ORTHO05D009570 2.8e-57 227.3 178 60.1
CSS0007679 Camellia sinensis var. sinensis HOM05D007595 ORTHO05D009570 3.7e-57 226.9 179 60.9
PGSC0003DMG400001689 Solanum tuberosum HOM05D007595 ORTHO05D009570 3.7e-57 226.9 178 58.4
FAN08G2497 Fragaria x ananassa HOM05D007595 ORTHO05D009570 1.1e-56 225.3 175 61.7
RcHm_v2.0_Chr7g0215291 Rosa chinensis HOM05D007595 ORTHO05D009570 2.4e-56 224.2 175 60.6
AUR62008574 Chenopodium quinoa HOM05D007595 ORTHO05D009570 3.1e-56 223.8 179 60.9
Ca_08455_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 3.1e-56 223.8 503 55.1
Gohir.A12G098700 Gossypium hirsutum HOM05D007595 ORTHO05D009570 4.1e-56 223.4 174 60.3
AUR62034666 Chenopodium quinoa HOM05D007595 ORTHO05D009570 1.2e-55 221.9 179 60.9
Actinidia05786 Actinidia chinensis HOM05D003161 ORTHO05D009570 1.6e-55 221.5 179 58.7
Ah.08g212430 Amaranthus hybridus HOM05D007595 ORTHO05D009570 2.0e-55 221.1 179 59.2
THA.LOC104811608 Tarenaya hassleriana HOM05D007595 ORTHO05D009570 2.0e-55 221.1 175 60.6
Ciclev10018805m.g Citrus clementina HOM05D007595 ORTHO05D009570 5.9e-55 219.5 178 59.6
FvH4_5g25080 Fragaria vesca HOM05D007595 ORTHO05D009570 5.9e-55 219.5 175 60.6
Peaxi162Scf00793g00032 Petunia axillaris HOM05D007595 ORTHO05D009570 5.9e-55 219.5 172 61.0
Lsat_1_v5_gn_4_38381 Lactuca sativa HOM05D007595 ORTHO05D009570 7.7e-55 219.2 177 59.3
Hund27417 Selenicereus undatus HOM05D007595 ORTHO05D009570 1.7e-54 218.0 180 61.1
Sc22g0000140 Simmondsia chinensis HOM05D007595 ORTHO05D009570 8.5e-54 215.7 179 59.2
Sc22g0001280 Simmondsia chinensis HOM05D007595 ORTHO05D009570 8.5e-54 215.7 179 59.2
CANSAT25G1659 Cannabis sativa HOM05D007595 ORTHO05D009570 1.5e-53 214.9 180 61.7
Sopen01g035520 Solanum pennellii HOM05D007595 ORTHO05D009570 2.5e-53 214.2 167 58.7
MELO3C006272.2 Cucumis melo HOM05D007595 ORTHO05D009570 3.2e-53 213.8 179 56.4
SHI13644 Sapria himalayana HOM05D007595 ORTHO05D009570 4.2e-53 213.4 179 56.4
TWI59G0156 Tripterygium wilfordii HOM05D007595 ORTHO05D009570 5.5e-53 213.0 179 58.7
CsaV3_3G010510 Cucumis sativus L. HOM05D007595 ORTHO05D009570 2.1e-52 211.1 179 55.3
RcHm_v2.0_Chr4g0407101 Rosa chinensis HOM05D007595 ORTHO05D009570 4.7e-52 209.9 175 58.9
Phvul.002G094300 Phaseolus vulgaris HOM05D007595 ORTHO05D009570 1.0e-51 208.8 178 54.5
Manes.01G274800 Manihot esculenta HOM05D007595 ORTHO05D009570 1.4e-51 208.4 179 55.3
Sed0013429 Sechium edule HOM05D007595 ORTHO05D009570 1.4e-51 208.4 179 54.7
MSTRG.20666 Avicennia marina HOM05D007595 ORTHO05D009570 1.8e-51 208.0 174 59.2
Migut.B01494 Erythranthe guttata HOM05D007595 ORTHO05D009570 3.0e-51 207.2 178 55.1
Glyma.07G218100 Glycine max HOM05D007595 ORTHO05D009570 4.0e-51 206.8 180 55.0
CANSAT78G1456 Cannabis sativa HOM05D007595 ORTHO05D009570 8.8e-51 205.7 180 60.0
VMungo0251G3282 Vigna mungo HOM05D007595 ORTHO05D009570 2.0e-50 204.5 177 52.5
Lalb_Chr16g0384971 Lupinus albus HOM05D007595 ORTHO05D009570 4.4e-50 203.4 180 54.4
CANSAT54G2206 Cannabis sativa HOM05D007595 ORTHO05D009570 9.8e-50 202.2 179 55.9
Lj1g0026949 Lotus japonicus HOM05D007595 ORTHO05D009570 9.8e-50 202.2 183 54.6
Ca_08452_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 1.3e-49 201.8 179 56.4
Rhsim05G0178700 Rhododendron simsii HOM05D007595 ORTHO05D009570 2.8e-49 200.7 177 57.1
EL10Ac7g17423 Beta vulgaris HOM05D007595 ORTHO05D009570 4.8e-49 199.9 179 55.9
vmacro09088 Vaccinium macrocarpon HOM05D007595 ORTHO05D009570 2.7e-47 194.1 179 56.4
SGA_v2.0_scaffold34G13580 Striga asiatica HOM05D007595 ORTHO05D009570 4.5e-47 193.4 178 55.1
Nitab4.5_0004273g0020 Nicotiana tabacum HOM05D007595 ORTHO05D009570 7.7e-47 192.6 143 62.9
Psat3g072800 Pisum sativum HOM05D007595 ORTHO05D009570 7.7e-47 192.6 180 50.6
Medtr7g091470 Medicago truncatula HOM05D007595 ORTHO05D009570 2.1e-44 184.5 173 49.7
Aa31LG1G28920 Aethionema arabicum HOM05D007595 ORTHO05D009570 8.0e-44 182.6 140 59.3
CAN.G756.22 Capsicum annuum HOM05D007595 ORTHO05D009570 1.8e-43 181.4 143 60.1
Glyma.20G014500 Glycine max HOM05D007595 ORTHO05D009570 5.2e-43 179.9 458 52.6
CDE04G2406 Ceratophyllum demersum HOM05D007595 ORTHO05D009570 1.2e-42 178.7 179 49.2
PSO675G4153 Papaver somniferum HOM05D007595 ORTHO05D009570 2.7e-39 167.5 176 50.6
Lalb_Chr05g0219501 Lupinus albus HOM05D007595 ORTHO05D009570 6.6e-38 162.9 172 46.5
Nitab4.5_0000563g0010 Nicotiana tabacum HOM05D007595 ORTHO05D009570 2.5e-37 161.0 130 58.5
PSO732G0035 Papaver somniferum HOM05D007595 ORTHO05D009570 2.5e-37 161.0 179 48.0
Thecc.01G401700 Theobroma cacao HOM05D007595 ORTHO05D009570 1.8e-35 154.8 112 66.1
PSO732G0412 Papaver somniferum HOM05D007595 ORTHO05D009570 3.0e-35 154.1 162 51.2
Aqoxy7G02148 Aquilegia oxysepala HOM05D007595 ORTHO05D009570 1.2e-34 152.1 154 50.6
TAR629G2414 Trochodendron aralioides HOM05D007595 ORTHO05D009570 2.0e-34 151.4 124 63.7
Gohir.D12G101900 Gossypium hirsutum HOM05D007595 ORTHO05D009570 7.5e-34 149.4 113 61.1
Rhsim07G0038800 Rhododendron simsii HOM05D007595 ORTHO05D009570 1.3e-30 138.7 148 51.4
TPR.G3705 Trifolium pratense HOM05D007595 ORTHO05D009570 1.7e-30 138.3 109 59.6
RcHm_v2.0_Chr4g0407111 Rosa chinensis HOM05D007595 ORTHO05D009570 1.8e-27 128.3 88 65.9
Nn1g00708 Nelumbo nucifera HOM05D007595 ORTHO05D009570 2.3e-27 127.9 113 57.5
PGR042G2115 Punica granatum HOM05D007595 ORTHO05D009570 2.3e-27 127.9 116 55.2
GSVIVG01018339001 Vitis vinifera HOM05D007595 ORTHO05D009570 2.3e-27 127.9 88 61.4
HanXRQChr14g0457401 Helianthus annuus HOM05D007595 ORTHO05D009570 2.0e-26 124.8 114 53.5
DCAR_029507 Daucus carota HOM05D007595 ORTHO05D009570 5.8e-26 123.2 116 51.7
Cc11_g12050 Coffea canephora HOM05D007595 ORTHO05D009570 5.4e-24 116.7 77 68.8
Gorai.008G111100 Gossypium raimondii HOM05D007595 ORTHO05D009570 5.4e-24 116.7 87 59.8
HPP92_014879 Vanilla planifolia HOM05D007595 ORTHO05D009570 1.5e-21 108.6 167 37.7
ECA234G2641 Erigeron canadensis HOM05D007595 ORTHO05D009570 1.5e-18 98.6 105 48.6
Sabra14G0039700 Salix brachista HOM05D007595 ORTHO05D009570 8.3e-17 92.8 173 72.8
Solyc01g088670.3 Solanum lycopersicum HOM05D007595 ORTHO05D009570 2.7e-15 87.8 87 67.8
FAN18G0104 Fragaria x ananassa HOM05D007595 ORTHO05D009570 3.3e-13 80.9 86 46.5
MD07G1093100 Malus domestica HOM05D007595 ORTHO05D009570 5.6e-13 80.1 75 53.3
Cpa.g.sc52.75 Carica papaya HOM05D007595 ORTHO05D009570 1.6e-12 78.6 57 57.9
Migut.I00272 Erythranthe guttata HOM05D007595 ORTHO05D009570 1.6e-12 78.6 87 47.1
Thhalv10003688m.g Eutrema salsugineum HOM05D007496 ORTHO05D009479 1.6e-12 78.6 160 28.1
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 3.6e-12 77.4 75 49.3
ATR0665G577 Amborella trichopoda HOM05D007595 ORTHO05D009570 1.1e-11 75.9 227 53.7
Carub.0005s0122 Capsella rubella HOM05D007496 ORTHO05D009479 6.8e-11 73.2 161 28.0
Oeu013687.1 Olea europaea HOM05D006858 ORTHO05D008767 1.5e-10 72.0 135 31.9
Sp2g13565 Schrenkiella parvula HOM05D007496 ORTHO05D009479 4.4e-10 70.5 153 27.5
CAN.G322.19 Capsicum annuum HOM05D006858 ORTHO05D008767 1.7e-09 68.6 142 30.3
AT2G02150 Arabidopsis thaliana HOM05D007496 ORTHO05D009479 2.9e-09 67.8 153 26.8
Aqoxy6G01416 Aquilegia oxysepala HOM05D006858 ORTHO05D008767 3.8e-09 67.4 143 28.0
CsaV3_7G008750 Cucumis sativus L. HOM05D006858 ORTHO05D008767 8.4e-09 66.2 140 25.0
Actinidia17852 Actinidia chinensis HOM05D006858 ORTHO05D008767 1.1e-08 65.9 143 29.4
MELO3C018437.2 Cucumis melo HOM05D006858 ORTHO05D008767 1.4e-08 65.5 142 24.6
Eucgr.D01185 Eucalyptus grandis HOM05D007595 ORTHO05D009570 1.9e-08 65.1 54 53.7
RcHm_v2.0_Chr1g0330001 Rosa chinensis HOM05D008657 ORTHO05D010869 1.9e-08 65.1 287 38.0
CDE09G0292 Ceratophyllum demersum HOM05D007212 ORTHO05D009094 2.4e-08 64.7 181 24.9
Nitab4.5_0005583g0010 Nicotiana tabacum HOM05D006858 ORTHO05D008767 3.2e-08 64.3 142 28.2
Sc08g0000040 Simmondsia chinensis HOM05D006858 ORTHO05D008767 4.1e-08 63.9 144 28.5
AL5G11430 Arabidopsis lyrata HOM05D007496 ORTHO05D009479 5.4e-08 63.5 153 24.8
ClCG02G005770 Citrullus lanatus HOM05D006858 ORTHO05D008767 5.4e-08 63.5 142 23.9
Solyc01g108410.3 Solanum lycopersicum HOM05D006858 ORTHO05D008767 7.1e-08 63.2 137 27.0
Sopen01g050630 Solanum pennellii HOM05D006858 ORTHO05D008767 7.1e-08 63.2 137 27.0
CSS0045109 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 1.2e-07 62.4 156 24.4
CSS0047431 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 1.2e-07 62.4 156 24.4
CsaV3_5G029290 Cucumis sativus L. HOM05D008657 ORTHO05D010869 1.2e-07 62.4 293 28.3
PGSC0003DMG401025809 Solanum tuberosum HOM05D006858 ORTHO05D008767 1.2e-07 62.4 142 26.1
Duzib132G0284 Durio zibethinus HOM05D006858 ORTHO05D008767 2.1e-07 61.6 140 25.7
Nitab4.5_0000103g0110 Nicotiana tabacum HOM05D000104 ORTHO05D009920 2.1e-07 61.6 100 31.0
BcaC06g34078 Brassica carinata HOM05D007496 ORTHO05D009479 2.7e-07 61.2 152 26.3
BolC7t43809H Brassica oleracea HOM05D007496 ORTHO05D009479 2.7e-07 61.2 152 26.3
MELO3C035731.2 Cucumis melo HOM05D002890 ORTHO05D009847 2.7e-07 61.2 171 22.8
VMungo0251G0107 Vigna mungo HOM05D007101 ORTHO05D008632 2.7e-07 61.2 101 32.7
Zm00001eb224150 Zea mays HOM05D011046 ORTHO05D013342 3.5e-07 60.8 87 44.8
C07p33010 Brassica napus HOM05D007496 ORTHO05D009479 4.6e-07 60.5 152 26.3
Haze_01905 Corylus avellana HOM05D006858 ORTHO05D008767 4.6e-07 60.5 152 23.7
Sopen03g025210 Solanum pennellii HOM05D000104 ORTHO05D009920 4.6e-07 60.5 100 31.0
Gohir.A03G191600 Gossypium hirsutum HOM05D006858 ORTHO05D008767 6.0e-07 60.1 140 25.0
Gorai.003G135500 Gossypium raimondii HOM05D007212 ORTHO05D009094 6.0e-07 60.1 178 27.5
Nitab4.5_0001130g0070 Nicotiana tabacum HOM05D000104 ORTHO05D009920 6.0e-07 60.1 100 31.0
Solyc03g095200.1 Solanum lycopersicum HOM05D000104 ORTHO05D009920 6.0e-07 60.1 100 31.0
BraA06t27256Z Brassica rapa HOM05D007496 ORTHO05D009479 7.8e-07 59.7 127 27.6
FvH4_2g06720 Fragaria vesca HOM05D006858 ORTHO05D008767 7.8e-07 59.7 135 26.7
BcaC06g31248 Brassica carinata HOM05D007496 ORTHO05D009479 1.0e-06 59.3 152 25.0
Aa31LG1G3060 Aethionema arabicum HOM05D002890 ORTHO05D009847 1.3e-06 58.9 161 23.6
BcaB01g06201 Brassica carinata HOM05D007455 ORTHO05D009431 1.3e-06 58.9 145 27.6
FAN15G2218 Fragaria x ananassa HOM05D006858 ORTHO05D008767 1.3e-06 58.9 135 25.9
Aa31LG3G11740 Aethionema arabicum HOM05D007390 ORTHO05D009114 1.7e-06 58.5 166 24.7
CAN.G322.18 Capsicum annuum HOM05D006858 ORTHO05D008767 1.7e-06 58.5 142 28.2
TWI79G0736 Tripterygium wilfordii HOM05D007455 ORTHO05D009431 1.7e-06 58.5 128 27.3
Actinidia06485 Actinidia chinensis HOM05D007545 ORTHO05D009579 2.3e-06 58.2 134 23.9
Cfa005452 Carpinus fangiana HOM05D006858 ORTHO05D008767 3.0e-06 57.8 140 23.6
FAN24G1409 Fragaria x ananassa HOM05D006858 ORTHO05D008767 3.0e-06 57.8 135 25.9
Potri.014G056400 Populus trichocarpa HOM05D000104 ORTHO05D009920 3.0e-06 57.8 100 29.0
A03p00400 Brassica napus HOM05D007455 ORTHO05D009431 3.9e-06 57.4 145 26.9
A06p43780 Brassica napus HOM05D007496 ORTHO05D009479 3.9e-06 57.4 127 26.0
C03p00670 Brassica napus HOM05D007455 ORTHO05D009431 3.9e-06 57.4 145 29.0
BolC3t12630H Brassica oleracea HOM05D007455 ORTHO05D009431 3.9e-06 57.4 145 29.0
LjContig00141g0003453 Lotus japonicus HOM05D007545 ORTHO05D009579 3.9e-06 57.4 157 23.6
Lalb_Chr10g0095481 Lupinus albus HOM05D006858 ORTHO05D008767 3.9e-06 57.4 132 28.8
Peaxi162Scf00016g00164 Petunia axillaris HOM05D006858 ORTHO05D008767 3.9e-06 57.4 135 25.2
RcHm_v2.0_Chr7g0231291 Rosa chinensis HOM05D007291 ORTHO05D009038 3.9e-06 57.4 156 24.4
BraA03t09431Z Brassica rapa HOM05D007455 ORTHO05D009431 5.1e-06 57.0 145 26.9
ClCG07G005030 Citrullus lanatus HOM05D008657 ORTHO05D010869 5.1e-06 57.0 291 25.1
COL.COLO4_32688 Corchorus olitorius HOM05D006858 ORTHO05D008767 5.1e-06 57.0 141 25.5
FAN20G2333 Fragaria x ananassa HOM05D006858 ORTHO05D008767 5.1e-06 57.0 135 24.4
Manes.10G064000 Manihot esculenta HOM05D007496 ORTHO05D009479 5.1e-06 57.0 134 32.1
Oeu030299.1 Olea europaea HOM05D007545 ORTHO05D009579 5.1e-06 57.0 142 19.7
BcaB01g06086 Brassica carinata HOM05D007455 ORTHO05D009431 6.6e-06 56.6 145 28.3
Cpa.g.sc159.24 Carica papaya HOM05D007893 ORTHO05D010042 6.6e-06 56.6 102 31.4
PGR119G1317 Punica granatum HOM05D000891 ORTHO05D000761 6.6e-06 56.6 257 22.6
Zm00001eb367370 Zea mays HOM05D011046 ORTHO05D013342 6.6e-06 56.6 87 48.3
Atru.chr5.2775 Acer truncatum HOM05D006858 ORTHO05D008767 8.6e-06 56.2 109 29.4
MELO3C011779.2 Cucumis melo HOM05D008657 ORTHO05D010869 8.6e-06 56.2 293 27.6
Lj4P128T51 Lonicera japonica HOM05D007347 ORTHO05D009296 8.6e-06 56.2 161 27.3
Lj9A359T74 Lonicera japonica HOM05D006858 ORTHO05D008767 8.6e-06 56.2 158 25.9
Medtr5g077930 Medicago truncatula HOM05D007545 ORTHO05D009579 8.6e-06 56.2 160 21.2
Os10g0147250 Oryza sativa ssp. japonica HOM05D011046 ORTHO05D013342 8.6e-06 56.2 55 47.3


User provided reference genes

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