Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu004585.2 Olea europaea HOM05D003672 ORTHO05D004121 5.7e-259 897.1 472 100.0
Dinv34068 Davidia involucrata HOM05D003672 ORTHO05D004121 2.9e-69 266.9 537 39.7
TAR629G1848 Trochodendron aralioides HOM05D003672 ORTHO05D004121 7.4e-57 225.7 541 34.4
CSS0037619 Camellia sinensis var. sinensis HOM05D003672 ORTHO05D004121 1.3e-56 224.9 535 36.8
TAR629G0952 Trochodendron aralioides HOM05D003672 ORTHO05D004121 2.2e-56 224.2 542 34.3
SalBow2G2767 Salvia bowleyana HOM05D003672 ORTHO05D004121 3.1e-55 220.3 475 37.9
GSVIVG01012221001 Vitis vinifera HOM05D003672 ORTHO05D004121 4.2e-52 209.9 501 35.3
Actinidia31938 Actinidia chinensis HOM05D003672 ORTHO05D004121 1.5e-49 201.4 485 33.2
Nn3g17451 Nelumbo nucifera HOM05D003672 ORTHO05D004121 2.6e-46 190.7 544 31.8
Ciclev10019089m.g Citrus clementina HOM05D003672 ORTHO05D004121 4.2e-44 183.3 542 34.5
Cc11_g11950 Coffea canephora HOM05D003672 ORTHO05D004121 6.1e-43 179.5 519 33.9
Nn4g23428 Nelumbo nucifera HOM05D003672 ORTHO05D004121 2.6e-41 174.1 545 30.5
Actinidia18990 Actinidia chinensis HOM05D003672 ORTHO05D004121 2.2e-40 171.0 542 30.1
Actinidia35037 Actinidia chinensis HOM05D003672 ORTHO05D004121 1.1e-39 168.7 540 30.6
PGR102G2240 Punica granatum HOM05D003672 ORTHO05D004121 1.1e-39 168.7 510 32.2
Dinv22781 Davidia involucrata HOM05D003672 ORTHO05D004121 1.4e-39 168.3 537 30.5
Rhsim12G0074700 Rhododendron simsii HOM05D003672 ORTHO05D004121 5.3e-39 166.4 619 28.6
Potri.008G096100 Populus trichocarpa HOM05D003672 ORTHO05D004121 9.1e-39 165.6 489 31.9
Atru.chr9.577 Acer truncatum HOM05D003672 ORTHO05D004121 1.5e-38 164.9 539 31.9
Rhsim12G0075200 Rhododendron simsii HOM05D003672 ORTHO05D004121 2.6e-38 164.1 616 28.9
Hma1.2p1_0060F.1_g033090 Hydrangea macrophylla HOM05D003672 ORTHO05D004121 2.2e-37 161.0 545 31.2
GSVIVG01007866001 Vitis vinifera HOM05D003672 ORTHO05D004121 6.5e-37 159.5 535 30.8
Lj5C102T25 Lonicera japonica HOM05D003672 ORTHO05D004121 3.6e-35 153.7 518 29.3
Potri.015G057600 Populus trichocarpa HOM05D003672 ORTHO05D004121 3.6e-35 153.7 534 28.7
Migut.L01189 Erythranthe guttata HOM05D003672 ORTHO05D004121 4.7e-35 153.3 494 33.2
CSS0005049 Camellia sinensis var. sinensis HOM05D003672 ORTHO05D005912 1.5e-33 148.3 530 30.8
Glyma.04G162600 Glycine max HOM05D003672 ORTHO05D004121 3.3e-33 147.1 544 30.5
Duzib205G1655 Durio zibethinus HOM05D003672 ORTHO05D004121 4.4e-33 146.7 553 29.5
Thecc.03G101900 Theobroma cacao HOM05D003672 ORTHO05D004121 4.4e-33 146.7 546 29.3
Nitab4.5_0009401g0050 Nicotiana tabacum HOM05D003672 ORTHO05D004121 5.7e-33 146.4 517 30.6
COL.COLO4_06856 Corchorus olitorius HOM05D003672 ORTHO05D004121 1.7e-32 144.8 547 30.5
Peaxi162Scf00201g00329 Petunia axillaris HOM05D003672 ORTHO05D004121 6.3e-32 142.9 529 29.5
MD14G1212000 Malus domestica HOM05D003672 ORTHO05D004121 8.2e-32 142.5 532 31.2
CANSAT80G1081 Cannabis sativa HOM05D003672 ORTHO05D004121 1.1e-31 142.1 543 28.7
Cc00_g14840 Coffea canephora HOM05D003672 ORTHO05D004121 1.4e-31 141.7 542 29.5
Sabra15G0083600 Salix brachista HOM05D003672 ORTHO05D004121 1.8e-31 141.4 537 29.8
QL10p019524 Quercus lobata HOM05D003672 ORTHO05D004121 3.1e-31 140.6 550 30.4
QL03p074101 Quercus lobata HOM05D003672 ORTHO05D004121 4.1e-31 140.2 344 33.7
Solyc03g115100.4 Solanum lycopersicum HOM05D003672 ORTHO05D004121 4.1e-31 140.2 518 29.5
THA.LOC104819401 Tarenaya hassleriana HOM05D003672 ORTHO05D004121 7.0e-31 139.4 507 29.6
Sopen03g034170 Solanum pennellii HOM05D003672 ORTHO05D004121 9.1e-31 139.0 514 30.0
Nitab4.5_0001485g0140 Nicotiana tabacum HOM05D003672 ORTHO05D004121 2.0e-30 137.9 499 29.3
Prupe.5G205200 Prunus persica HOM05D003672 ORTHO05D004121 2.0e-30 137.9 533 29.8
Sabra08G0072400 Salix brachista HOM05D003672 ORTHO05D004121 2.0e-30 137.9 510 30.0
Manes.06G084700 Manihot esculenta HOM05D003672 ORTHO05D004121 3.5e-30 137.1 542 29.3
Cpa.g.sc94.57 Carica papaya HOM05D003672 ORTHO05D004121 4.5e-30 136.7 530 29.6
vmacro01315 Vaccinium macrocarpon HOM05D003672 ORTHO05D004121 4.5e-30 136.7 558 30.3
Cfa019341 Carpinus fangiana HOM05D003672 ORTHO05D004121 5.9e-30 136.3 547 30.7
Rhsim12G0148200 Rhododendron simsii HOM05D003672 ORTHO05D004121 1.0e-29 135.6 545 28.6
ECA233G1662 Erigeron canadensis HOM05D000677 ORTHO05D000727 1.3e-29 135.2 475 27.6
Oeu044870.1 Olea europaea HOM05D003672 ORTHO05D004121 1.3e-29 135.2 512 29.7
Lsat_1_v5_gn_8_46340 Lactuca sativa HOM05D003672 ORTHO05D004121 1.7e-29 134.8 481 28.9
vmacro16495 Vaccinium macrocarpon HOM05D003672 ORTHO05D004121 1.7e-29 134.8 568 29.0
PGSC0003DMG400028369 Solanum tuberosum HOM05D003672 ORTHO05D004121 2.2e-29 134.4 211 45.5
RcHm_v2.0_Chr7g0183101 Rosa chinensis HOM05D003672 ORTHO05D004121 2.9e-29 134.0 548 29.4
SalBow7G3172 Salvia bowleyana HOM05D003672 ORTHO05D004121 2.9e-29 134.0 528 28.4
Gorai.001G077200 Gossypium raimondii HOM05D003672 ORTHO05D004121 5.0e-29 133.3 528 30.1
Haze_11907 Corylus avellana HOM05D003672 ORTHO05D004121 8.5e-29 132.5 302 36.4
Eucgr.B03149 Eucalyptus grandis HOM05D003672 ORTHO05D004121 1.1e-28 132.1 538 28.3
QL03p074186 Quercus lobata HOM05D003672 ORTHO05D004121 1.5e-28 131.7 331 33.5
Migut.D01656 Erythranthe guttata HOM05D003672 ORTHO05D004121 1.9e-28 131.3 520 29.0
Manes.01G028000 Manihot esculenta HOM05D003672 ORTHO05D004121 1.9e-28 131.3 478 29.3
FvH4_5g13830 Fragaria vesca HOM05D003672 ORTHO05D004121 3.2e-28 130.6 530 28.7
DCAR_023172 Daucus carota HOM05D003672 ORTHO05D004121 5.5e-28 129.8 513 29.0
Duzib084G0362 Durio zibethinus HOM05D003672 ORTHO05D004121 5.5e-28 129.8 550 29.1
Glyma.06G203700 Glycine max HOM05D003672 ORTHO05D004121 7.2e-28 129.4 543 30.0
CARHR274750 Cardamine hirsuta HOM05D003672 ORTHO05D004121 9.4e-28 129.0 483 28.2
CiPaw.05G125000 Carya illinoinensis HOM05D003672 ORTHO05D004121 9.4e-28 129.0 267 36.3
FAN18G3332 Fragaria x ananassa HOM05D003672 ORTHO05D004121 9.4e-28 129.0 530 28.5
MSTRG.22965 Avicennia marina HOM05D003672 ORTHO05D004121 1.2e-27 128.6 531 27.9
Gohir.D07G073000 Gossypium hirsutum HOM05D003672 ORTHO05D004121 1.2e-27 128.6 530 29.6
Lalb_Chr13g0302861 Lupinus albus HOM05D003672 ORTHO05D004121 1.2e-27 128.6 510 32.9
AL8G37700 Arabidopsis lyrata HOM05D003672 ORTHO05D004121 1.6e-27 128.3 490 29.6
AUR62021559 Chenopodium quinoa HOM05D003672 ORTHO05D004121 1.6e-27 128.3 528 27.8
Gohir.A07G068500 Gossypium hirsutum HOM05D003672 ORTHO05D004121 2.1e-27 127.9 530 28.9
Aqoxy1G00151 Aquilegia oxysepala HOM05D003672 ORTHO05D004121 2.7e-27 127.5 526 29.7
TWI60G1197 Tripterygium wilfordii HOM05D003672 ORTHO05D004121 2.7e-27 127.5 511 29.2
Peaxi162Scf00175g00022 Petunia axillaris HOM05D003672 ORTHO05D004121 3.6e-27 127.1 499 28.7
TPR.G12189 Trifolium pratense HOM05D003672 ORTHO05D004121 3.6e-27 127.1 257 39.3
ATR0177G058 Amborella trichopoda HOM05D003672 ORTHO05D004121 4.7e-27 126.7 339 31.0
Nitab4.5_0000231g0260 Nicotiana tabacum HOM05D003672 ORTHO05D004121 8.0e-27 125.9 262 38.2
Sopen05g007060 Solanum pennellii HOM05D003672 ORTHO05D004121 8.0e-27 125.9 213 44.6
AT5G61040 Arabidopsis thaliana HOM05D003672 ORTHO05D004121 1.0e-26 125.6 491 29.7
Manes.14G085800 Manihot esculenta HOM05D003672 ORTHO05D004121 1.8e-26 124.8 521 28.4
Solyc05g012230.4 Solanum lycopersicum HOM05D003672 ORTHO05D004121 2.3e-26 124.4 475 29.1
FAN13G1740 Fragaria x ananassa HOM05D003672 ORTHO05D004121 3.0e-26 124.0 540 28.0
Lj1g0027425 Lotus japonicus HOM05D003672 ORTHO05D004121 3.0e-26 124.0 543 29.5
arahy.Tifrunner.gnm1.ann1.03S8MC Arachis hypogaea HOM05D003672 ORTHO05D004121 4.0e-26 123.6 236 39.0
Sed0002350 Sechium edule HOM05D003672 ORTHO05D004121 6.8e-26 122.9 526 27.2
PGSC0003DMG400024637 Solanum tuberosum HOM05D003672 ORTHO05D004121 1.5e-25 121.7 521 27.8
Ca_14345_v3 Cicer arietinum L. HOM05D003672 ORTHO05D004121 2.0e-25 121.3 229 39.3
ECA232G2426 Erigeron canadensis HOM05D003672 ORTHO05D004121 2.0e-25 121.3 491 29.7
Thhalv10013089m.g Eutrema salsugineum HOM05D003672 ORTHO05D004121 2.0e-25 121.3 482 30.1
Thhalv10003875m.g Eutrema salsugineum HOM05D003672 ORTHO05D004121 2.6e-25 120.9 497 27.8
Lalb_Chr07g0178301 Lupinus albus HOM05D003672 ORTHO05D004121 3.4e-25 120.6 513 29.6
arahy.Tifrunner.gnm1.ann1.R6LVKU Arachis hypogaea HOM05D003672 ORTHO05D004121 5.7e-25 119.8 553 28.4
Phvul.010G007200 Phaseolus vulgaris HOM05D003672 ORTHO05D004121 5.7e-25 119.8 329 35.3
CiPaw.12G008500 Carya illinoinensis HOM05D003672 ORTHO05D004121 7.5e-25 119.4 549 29.3
AUR62008531 Chenopodium quinoa HOM05D003672 ORTHO05D004121 7.5e-25 119.4 515 26.6
PSO478G1233 Papaver somniferum HOM05D003672 ORTHO05D004121 9.7e-25 119.0 317 31.5
VMungo0331G1159 Vigna mungo HOM05D003672 ORTHO05D004121 9.7e-25 119.0 328 34.8
Aa31LG3G18520 Aethionema arabicum HOM05D003672 ORTHO05D004121 1.3e-24 118.6 485 28.7
Carub.0006s0690 Capsella rubella HOM05D003672 ORTHO05D004121 1.3e-24 118.6 486 28.0
MBI16_g38067_MAGBIO Magnolia biondii HOM05D003672 ORTHO05D004121 1.3e-24 118.6 555 28.1
Nitab4.5_0009585g0010 Nicotiana tabacum HOM05D003672 ORTHO05D004121 1.7e-24 118.2 483 28.2
PSO017G3206 Papaver somniferum HOM05D003672 ORTHO05D004121 1.7e-24 118.2 317 33.8
Oeu061164.2 Olea europaea HOM05D003672 ORTHO05D004121 2.2e-24 117.9 534 27.7
FAN08G3423 Fragaria x ananassa HOM05D003672 ORTHO05D004121 3.7e-24 117.1 559 27.4
Phvul.003G184800 Phaseolus vulgaris HOM05D003672 ORTHO05D004121 3.7e-24 117.1 309 36.9
Atru.chr11.1624 Acer truncatum HOM05D003672 ORTHO05D004121 6.3e-24 116.3 223 38.6
HanXRQChr12g0363081 Helianthus annuus HOM05D003672 ORTHO05D004121 6.3e-24 116.3 467 29.1
arahy.Tifrunner.gnm1.ann1.SKH1UB Arachis hypogaea HOM05D003672 ORTHO05D004121 1.1e-23 115.5 548 28.3
Dinv17414 Davidia involucrata HOM05D003672 ORTHO05D004121 1.8e-23 114.8 507 30.2
HanXRQChr09g0270231 Helianthus annuus HOM05D003672 ORTHO05D004121 2.4e-23 114.4 487 28.5
TWI81G0716 Tripterygium wilfordii HOM05D003672 ORTHO05D004121 4.1e-23 113.6 530 29.4
Eucgr.B00592 Eucalyptus grandis HOM05D003672 ORTHO05D004121 5.3e-23 113.2 533 26.6
TWI15G0151 Tripterygium wilfordii HOM05D003672 ORTHO05D004121 7.0e-23 112.8 538 27.3
arahy.Tifrunner.gnm1.ann1.N0JE3Z Arachis hypogaea HOM05D003672 ORTHO05D004121 1.2e-22 112.1 546 28.0
Lj4g0018287 Lotus japonicus HOM05D003672 ORTHO05D004121 1.2e-22 112.1 317 33.8
EL10Ac5g11131 Beta vulgaris HOM05D003672 ORTHO05D004121 4.5e-22 110.2 519 27.0
ClCG06G015630 Citrullus lanatus HOM05D003672 ORTHO05D004121 4.5e-22 110.2 535 26.2
MELO3C002028.2 Cucumis melo HOM05D003672 ORTHO05D004121 4.5e-22 110.2 509 31.0
Lsat_1_v5_gn_4_111040 Lactuca sativa HOM05D003672 ORTHO05D004121 7.7e-22 109.4 219 37.4
AL6G18360 Arabidopsis lyrata HOM05D003672 ORTHO05D004121 1.7e-21 108.2 480 27.7
Glyma.05G021000 Glycine max HOM05D003672 ORTHO05D004121 1.7e-21 108.2 519 29.1
Sp2g24340 Schrenkiella parvula HOM05D003672 ORTHO05D004121 2.9e-21 107.5 496 28.2
Sp6g34930 Schrenkiella parvula HOM05D003672 ORTHO05D004121 2.9e-21 107.5 478 28.9
Haze_07732 Corylus avellana HOM05D003672 ORTHO05D004121 6.5e-21 106.3 261 34.5
Os12g0576300 Oryza sativa ssp. japonica HOM05D003672 ORTHO05D004121 6.5e-21 106.3 321 31.2
PGR083G2392 Punica granatum HOM05D003672 ORTHO05D004121 6.5e-21 106.3 543 28.2
Hund02585 Selenicereus undatus HOM05D003672 ORTHO05D004121 6.5e-21 106.3 519 27.7
CiPaw.11G053900 Carya illinoinensis HOM05D003672 ORTHO05D004121 8.5e-21 105.9 235 38.7
Carub.0008s2173 Capsella rubella HOM05D003672 ORTHO05D004121 1.1e-20 105.5 497 27.8
BraA03t13796Z Brassica rapa HOM05D003672 ORTHO05D004121 1.5e-20 105.1 482 28.6
Ah.02g114040 Amaranthus hybridus HOM05D003672 ORTHO05D004121 2.5e-20 104.4 531 26.6
CsaV3_1G002930 Cucumis sativus L. HOM05D003672 ORTHO05D004121 3.2e-20 104.0 543 26.5
CsaV3_1G005970 Cucumis sativus L. HOM05D003672 ORTHO05D004121 3.2e-20 104.0 498 29.7
SGA_v2.0_scaffold36G14460 Striga asiatica HOM05D003672 ORTHO05D004121 3.2e-20 104.0 234 36.8
Ciclev10033781m.g Citrus clementina HOM05D003672 ORTHO05D004121 4.2e-20 103.6 499 27.5
BcaB08g37298 Brassica carinata HOM05D003672 ORTHO05D004121 9.4e-20 102.4 215 36.7
SGA_v2.0_scaffold25G10960 Striga asiatica HOM05D003672 ORTHO05D004121 9.4e-20 102.4 516 26.2
BraA10t44910Z Brassica rapa HOM05D003672 ORTHO05D004121 1.6e-19 101.7 234 34.2
Gohir.A12G182700 Gossypium hirsutum HOM05D003672 ORTHO05D004121 1.6e-19 101.7 508 28.1
Gorai.008G199200 Gossypium raimondii HOM05D003672 ORTHO05D004121 2.7e-19 100.9 502 28.3
Gohir.D12G185800 Gossypium hirsutum HOM05D003672 ORTHO05D004121 3.6e-19 100.5 500 28.0
CAN.G3169.1 Capsicum annuum HOM05D002946 ORTHO05D003299 8.0e-19 99.4 224 32.1
A10p28610 Brassica napus HOM05D003672 ORTHO05D004121 1.0e-18 99.0 215 36.3
ClCG04G011810 Citrullus lanatus HOM05D003672 ORTHO05D004121 1.0e-18 99.0 503 28.4
Psat2g037720 Pisum sativum HOM05D003672 ORTHO05D004121 1.0e-18 99.0 298 32.6
HPP92_007830 Vanilla planifolia HOM05D003672 ORTHO05D004121 1.0e-18 99.0 232 33.6
Zm00001eb136280 Zea mays HOM05D003672 ORTHO05D004121 1.8e-18 98.2 215 34.9
Sed0025785 Sechium edule HOM05D003672 ORTHO05D004121 2.3e-18 97.8 494 28.7
Hund09914 Selenicereus undatus HOM05D003672 ORTHO05D004121 3.0e-18 97.4 528 27.8
AT5G08010 Arabidopsis thaliana HOM05D003672 ORTHO05D004121 4.0e-18 97.1 486 26.7
HanXRQChr16g0502451 Helianthus annuus HOM05D003672 ORTHO05D004121 4.0e-18 97.1 213 33.8
Sc12g0007260 Simmondsia chinensis HOM05D003672 ORTHO05D004121 5.2e-18 96.7 446 28.5
BcaC06g33181 Brassica carinata HOM05D003672 ORTHO05D004121 8.8e-18 95.9 493 27.6
CARHR205170 Cardamine hirsuta HOM05D003672 ORTHO05D004121 1.2e-17 95.5 477 28.1
Lj5A435T21 Lonicera japonica HOM05D003672 ORTHO05D004121 1.2e-17 95.5 517 25.0
MELO3C017225.2 Cucumis melo HOM05D003672 ORTHO05D004121 7.5e-17 92.8 586 25.1
Medtr3g025870 Medicago truncatula HOM05D003672 ORTHO05D004121 1.7e-16 91.7 542 25.8
BolC7t45002H Brassica oleracea HOM05D003672 ORTHO05D004121 1.4e-15 88.6 497 29.4
C07p44780 Brassica napus HOM05D003672 ORTHO05D004121 3.1e-15 87.4 493 27.8
MBI16_g36263_MAGBIO Magnolia biondii HOM05D003672 ORTHO05D004121 5.4e-15 86.7 465 28.2
Ah.11g047770 Amaranthus hybridus HOM05D003672 ORTHO05D004121 9.1e-15 85.9 551 25.8
unitig_749.g13432 Utricularia gibba HOM05D003672 ORTHO05D004121 9.1e-15 85.9 224 32.6
CDE04G0191 Ceratophyllum demersum HOM05D003672 ORTHO05D004121 5.9e-14 83.2 242 30.6
BolC9t59636H Brassica oleracea HOM05D003672 ORTHO05D004121 2.3e-13 81.3 215 31.2
CAN.G1228.24 Capsicum annuum HOM05D003672 ORTHO05D004121 2.3e-13 81.3 200 31.5
C09p68900 Brassica napus HOM05D003672 ORTHO05D004121 6.6e-13 79.7 283 29.0
CDE07G1307 Ceratophyllum demersum HOM05D003672 ORTHO05D004121 1.1e-12 79.0 302 28.8
Zm00001eb029540 Zea mays HOM05D003672 ORTHO05D004121 1.5e-12 78.6 318 29.9
Aa31LG11G2260 Aethionema arabicum HOM05D003672 ORTHO05D004121 5.5e-12 76.6 479 24.2
A03p46740 Brassica napus HOM05D003672 ORTHO05D004121 1.2e-11 75.5 482 27.6
CAN.G1228.26 Capsicum annuum HOM05D003672 ORTHO05D004121 1.2e-11 75.5 430 27.0
SEGI_35614 Sequoiadendron giganteum HOM05D003672 ORTHO05D004121 1.2e-11 75.5 226 30.5
MSTRG.7745 Avicennia marina HOM05D003672 ORTHO05D004121 3.6e-11 73.9 98 45.9
SEGI_10408 Sequoiadendron giganteum HOM05D003672 ORTHO05D004121 5.7e-09 66.6 215 30.2
Actinidia19914 Actinidia chinensis HOM05D000020 ORTHO05D000156 1.7e-08 65.1 108 37.0
HPP92_000460 Vanilla planifolia HOM05D003672 ORTHO05D004121 6.3e-08 63.2 225 29.8
VMungo1215G2632 Vigna mungo HOM05D003672 ORTHO05D004121 1.2e-06 58.9 422 26.5
BcaB08g37300 Brassica carinata HOM05D003672 ORTHO05D004121 1.6e-06 58.5 87 44.8
VMungo1215G3071 Vigna mungo HOM05D003672 ORTHO05D004121 1.6e-06 58.5 38 71.1


User provided reference genes

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