Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 2.2e-216 755.4 386 100.0
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 2.6e-116 422.9 382 62.0
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 2.9e-115 419.5 382 61.3
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 4.9e-107 392.1 375 61.6
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 2.7e-105 386.3 416 56.5
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 3.6e-102 375.9 337 60.8
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 2.0e-100 370.2 387 55.8
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 7.5e-100 368.2 386 54.4
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 3.7e-99 365.9 387 55.0
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 4.9e-99 365.5 380 55.3
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 1.4e-98 364.0 380 54.5
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 2.4e-98 363.2 386 55.2
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 4.1e-98 362.5 373 57.1
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 1.2e-97 360.9 368 56.2
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 1.2e-97 360.9 378 55.8
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 1.6e-97 360.5 378 55.8
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 3.5e-97 359.4 378 55.8
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 4.6e-97 359.0 361 58.2
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 6.0e-97 358.6 388 52.6
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 1.1e-95 354.4 388 54.1
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 1.9e-95 353.6 383 53.5
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 2.1e-94 350.1 219 78.1
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 2.8e-94 349.7 385 54.3
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 2.8e-94 349.7 387 54.8
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 3.6e-94 349.4 396 52.5
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 8.1e-94 348.2 387 53.2
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 2.4e-93 346.7 377 54.6
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 1.2e-92 344.4 220 77.7
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 1.2e-92 344.4 356 52.8
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 1.5e-92 344.0 224 76.8
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 2.0e-92 343.6 378 51.6
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 2.6e-92 343.2 378 53.2
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 3.4e-92 342.8 386 53.9
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 4.4e-92 342.4 331 55.9
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 4.4e-92 342.4 251 70.1
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 9.9e-92 341.3 398 51.8
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 1.3e-91 340.9 257 70.4
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 2.9e-91 339.7 240 72.9
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 3.8e-91 339.3 331 55.3
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 1.4e-90 337.4 237 71.3
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 5.4e-90 335.5 409 50.9
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 5.4e-90 335.5 201 79.1
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 1.2e-89 334.3 230 73.0
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 1.6e-89 334.0 221 75.1
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 1.6e-89 334.0 414 50.2
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 3.5e-89 332.8 216 75.9
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 1.7e-88 330.5 439 48.3
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 1.7e-88 330.5 338 55.9
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 3.9e-88 329.3 229 72.1
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 5.1e-88 328.9 375 50.1
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 1.1e-87 327.8 395 50.4
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 1.1e-87 327.8 201 79.1
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 1.5e-87 327.4 209 77.5
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 1.5e-87 327.4 212 75.9
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 1.9e-87 327.0 225 73.3
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 1.9e-87 327.0 353 55.0
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 2.5e-87 326.6 379 52.5
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 4.3e-87 325.9 231 70.1
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 4.3e-87 325.9 199 79.9
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 5.6e-87 325.5 205 76.6
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 7.3e-87 325.1 226 73.5
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 7.3e-87 325.1 387 51.7
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 9.6e-87 324.7 222 73.0
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 1.6e-86 323.9 209 77.0
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 2.1e-86 323.6 187 82.9
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 2.8e-86 323.2 236 69.5
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 3.1e-85 319.7 255 64.3
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 1.5e-84 317.4 256 65.2
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 2.0e-84 317.0 361 51.8
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 4.4e-84 315.8 206 75.2
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 5.8e-84 315.5 219 74.4
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 1.9e-82 310.5 376 50.0
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 4.2e-82 309.3 345 51.9
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 7.1e-82 308.5 413 46.2
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 1.2e-81 307.8 368 51.1
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 1.2e-81 307.8 368 51.1
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 7.8e-81 305.1 209 72.2
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 7.8e-81 305.1 218 74.8
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 1.7e-80 303.9 225 68.9
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 2.3e-80 303.5 374 50.0
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 3.0e-80 303.1 369 50.9
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 3.0e-80 303.1 384 50.3
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 3.9e-80 302.8 380 50.5
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 5.1e-80 302.4 188 77.1
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 8.7e-80 301.6 220 70.5
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 1.9e-79 300.4 384 49.7
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 2.5e-79 300.1 230 67.4
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 3.3e-79 299.7 226 67.7
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 4.3e-79 299.3 219 70.3
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 5.6e-79 298.9 222 67.6
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 5.6e-79 298.9 362 50.8
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 1.3e-78 297.7 393 48.6
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 1.3e-78 297.7 387 49.6
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 2.8e-78 296.6 170 83.5
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 6.2e-78 295.4 169 83.4
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 8.1e-78 295.0 159 87.4
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 4.0e-77 292.7 371 46.4
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 6.9e-77 292.0 240 63.3
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 4.5e-76 289.3 371 46.1
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 9.9e-76 288.1 371 46.1
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 1.3e-75 287.7 236 63.6
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 2.2e-75 287.0 373 46.4
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 1.2e-73 281.2 219 64.8
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 1.0e-72 278.1 319 48.3
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 9.6e-71 271.6 169 78.1
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 1.9e-66 257.3 214 62.6
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 1.1e-63 248.1 150 80.7
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 1.1e-63 248.1 209 59.3
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 1.3e-59 234.6 207 56.5
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 1.1e-58 231.5 190 58.9
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 5.1e-56 222.6 218 51.8
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 1.6e-54 217.6 121 86.0
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 7.7e-52 208.8 161 61.5
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 3.2e-50 203.4 150 62.7
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 5.5e-50 202.6 227 47.6
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 7.9e-49 198.7 176 55.7
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 2.3e-48 197.2 169 59.8
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 8.8e-48 195.3 103 85.4
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 9.4e-34 148.7 183 51.9
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 4.8e-30 136.3 79 75.9
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 1.1e-29 135.2 69 84.1
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 7.5e-15 85.9 61 67.2
BolC8t49668H Brassica oleracea HOM05D005712 ORTHO05D032168 5.5e-10 69.7 133 37.6
BcaB03g14422 Brassica carinata HOM05D005712 ORTHO05D014368 4.0e-08 63.5 50 66.0
BcaC07g39055 Brassica carinata HOM05D005712 ORTHO05D032168 9.8e-07 58.9 150 33.3


User provided reference genes

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