Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu004534.1 Olea europaea HOM05D008697 ORTHO05D010866 2.6e-222 775.0 368 100.0
Oeu008441.1 Olea europaea HOM05D008697 ORTHO05D010866 8.6e-45 185.3 202 48.5
QL02p015450 Quercus lobata HOM05D007494 ORTHO05D009621 2.3e-37 160.6 367 30.0
Nitab4.5_0005200g0080 Nicotiana tabacum HOM05D008697 ORTHO05D010866 2.8e-35 153.7 319 34.5
Actinidia11171 Actinidia chinensis HOM05D008697 ORTHO05D010866 1.4e-26 124.8 377 29.4
Migut.N02976 Erythranthe guttata HOM05D008697 ORTHO05D010866 4.0e-26 123.2 317 31.5
Nitab4.5_0000430g0080 Nicotiana tabacum HOM05D008697 ORTHO05D010866 5.3e-26 122.9 323 31.6
Peaxi162Scf00001g00056 Petunia axillaris HOM05D008697 ORTHO05D010866 5.3e-26 122.9 340 29.7
Peaxi162Scf00171g00817 Petunia axillaris HOM05D008697 ORTHO05D010866 6.9e-26 122.5 368 28.0
CAN.G637.32 Capsicum annuum HOM05D008697 ORTHO05D010866 2.6e-25 120.6 394 29.7
Nitab4.5_0003309g0040 Nicotiana tabacum HOM05D008697 ORTHO05D010866 3.4e-25 120.2 323 31.9
PGSC0003DMG400025633 Solanum tuberosum HOM05D008697 ORTHO05D010866 5.8e-25 119.4 340 29.1
CAN.G1631.3 Capsicum annuum HOM05D008697 ORTHO05D010866 2.2e-24 117.5 321 28.0
Peaxi162Scf00171g00721 Petunia axillaris HOM05D008697 ORTHO05D010866 2.9e-24 117.1 316 31.0
CAN.G1909.14 Capsicum annuum HOM05D008697 ORTHO05D010866 8.4e-24 115.5 360 27.5
Peaxi162Scf00171g00630 Petunia axillaris HOM05D008697 ORTHO05D010866 8.4e-24 115.5 320 30.6
Peaxi162Scf00251g00041 Petunia axillaris HOM05D008697 ORTHO05D010866 1.9e-23 114.4 340 27.9
QL03p004281 Quercus lobata HOM05D008697 ORTHO05D010866 1.2e-22 111.7 388 26.0
CAN.G1631.9 Capsicum annuum HOM05D008697 ORTHO05D010866 3.0e-21 107.1 323 26.3
Sopen03g029630 Solanum pennellii HOM05D008697 ORTHO05D010923 3.0e-21 107.1 327 27.5
CAN.G1631.2 Capsicum annuum HOM05D008697 ORTHO05D010866 5.1e-21 106.3 323 27.6
Potri.005G254500 Populus trichocarpa HOM05D000664 ORTHO05D010866 5.1e-21 106.3 368 27.7
Potri.005G254633 Populus trichocarpa HOM05D000664 ORTHO05D010866 3.3e-20 103.6 369 27.4
PGSC0003DMG400015218 Solanum tuberosum HOM05D008697 ORTHO05D010923 4.3e-20 103.2 316 27.8
PGSC0003DMG400015282 Solanum tuberosum HOM05D008697 ORTHO05D010866 4.3e-20 103.2 366 24.9
PGSC0003DMG400025634 Solanum tuberosum HOM05D008697 ORTHO05D010866 5.6e-20 102.8 359 27.3
PGSC0003DMG400015217 Solanum tuberosum HOM05D008697 ORTHO05D010866 9.6e-20 102.1 354 26.0
Carub.0001s2024 Capsella rubella HOM05D007494 ORTHO05D009621 1.1e-18 98.6 355 26.8
CAN.G637.31 Capsicum annuum HOM05D008697 ORTHO05D010866 1.4e-18 98.2 361 24.9
AT1G20240 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.8e-18 97.8 302 27.5
Duzib041G0294 Durio zibethinus HOM05D007494 ORTHO05D009621 1.8e-18 97.8 369 26.3
PSO210G4175 Papaver somniferum HOM05D007162 ORTHO05D007631 2.0e-17 94.4 384 23.2
Nitab4.5_0004454g0050 Nicotiana tabacum HOM05D008697 ORTHO05D010866 4.9e-16 89.7 243 29.6
THA.LOC104813281 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 6.4e-16 89.4 390 23.8
Nitab4.5_0003309g0020 Nicotiana tabacum HOM05D008697 ORTHO05D010866 8.4e-16 89.0 119 36.1
A08p29250 Brassica napus HOM05D007494 ORTHO05D009621 1.9e-15 87.8 343 27.1
PGSC0003DMG400025631 Solanum tuberosum HOM05D008697 ORTHO05D010866 1.9e-15 87.8 269 26.0
PGSC0003DMG400017884 Solanum tuberosum HOM05D008697 ORTHO05D010866 2.5e-15 87.4 389 27.0
BraA08t34860Z Brassica rapa HOM05D007494 ORTHO05D009621 4.2e-15 86.7 343 27.1
Peaxi162Scf00171g00931 Petunia axillaris HOM05D008697 ORTHO05D010866 9.3e-15 85.5 168 31.0
AL1G33970 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.2e-14 85.1 362 26.0
Aa31LG7G4950 Aethionema arabicum HOM05D007494 ORTHO05D009621 3.5e-14 83.6 339 26.0
BraA08t34811Z Brassica rapa HOM05D007494 ORTHO05D009621 4.6e-14 83.2 344 22.7
BcaB03g12853 Brassica carinata HOM05D007494 ORTHO05D009621 1.3e-13 81.6 345 23.2
A08p28830 Brassica napus HOM05D007494 ORTHO05D009621 1.3e-13 81.6 344 22.4
BraA09t39811Z Brassica rapa HOM05D007494 ORTHO05D009621 1.3e-13 81.6 257 29.2
THA.LOC104813247 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 1.3e-13 81.6 354 24.9
Sopen03g029650 Solanum pennellii HOM05D008697 ORTHO05D010866 1.8e-13 81.3 353 24.6
Sopen03g029100 Solanum pennellii HOM05D008697 ORTHO05D010866 3.9e-13 80.1 251 29.5
Carub.0004s0895 Capsella rubella HOM05D007494 ORTHO05D009621 5.1e-13 79.7 263 27.0
Aa31LG8G15360 Aethionema arabicum HOM05D007494 ORTHO05D009621 1.1e-12 78.6 318 25.8
AT1G20735 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.9e-12 77.8 297 26.9
Carub.0005s1178 Capsella rubella HOM05D007494 ORTHO05D009621 1.9e-12 77.8 265 26.4
BcaB01g00617 Brassica carinata HOM05D007494 ORTHO05D009621 2.5e-12 77.4 356 26.1
AT1G20940 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 4.3e-12 76.6 289 26.3
AL5G30530 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 5.6e-12 76.3 378 23.3
BcaB03g13899 Brassica carinata HOM05D007494 ORTHO05D009621 7.4e-12 75.9 346 23.1
COL.COLO4_15974 Corchorus olitorius HOM05D000007 ORTHO05D000521 7.4e-12 75.9 356 23.3
QL02p015444 Quercus lobata HOM05D007494 ORTHO05D009621 7.4e-12 75.9 144 33.3
BcaC07g39053 Brassica carinata HOM05D007494 ORTHO05D009621 9.6e-12 75.5 258 28.3
AL1G67140 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 2.1e-11 74.3 264 25.4
AL1G33790 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 3.7e-11 73.6 355 24.2
Rhsim01G0013300 Rhododendron simsii HOM05D000664 ORTHO05D000491 3.7e-11 73.6 277 26.0
BcaB03g12780 Brassica carinata HOM05D007494 ORTHO05D009621 6.2e-11 72.8 348 23.3
C08p20370 Brassica napus HOM05D007494 ORTHO05D009621 6.2e-11 72.8 262 27.5
BolC8t49665H Brassica oleracea HOM05D007494 ORTHO05D009621 6.2e-11 72.8 262 27.5
AT1G20790 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 8.2e-11 72.4 292 27.1
AT1G20795 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.4e-10 71.6 339 25.4
A03p18740 Brassica napus HOM05D007494 ORTHO05D009621 1.4e-10 71.6 377 24.1
Nitab4.5_0004148g0080 Nicotiana tabacum HOM05D008697 ORTHO05D010866 2.4e-10 70.9 282 25.9
BcaC07g39499 Brassica carinata HOM05D007494 ORTHO05D009621 3.1e-10 70.5 217 30.4
BraA03t11134Z Brassica rapa HOM05D007494 ORTHO05D009621 3.1e-10 70.5 374 23.8
Carub.0001s1977 Capsella rubella HOM05D007494 ORTHO05D009621 3.1e-10 70.5 235 26.8
BcaC07g39120 Brassica carinata HOM05D007494 ORTHO05D009621 4.0e-10 70.1 255 21.6
A09p43410 Brassica napus HOM05D007494 ORTHO05D009621 4.0e-10 70.1 300 26.0
C08p25460 Brassica napus HOM05D007494 ORTHO05D009621 4.0e-10 70.1 314 27.1
C08p25440 Brassica napus HOM05D007494 ORTHO05D009621 5.3e-10 69.7 305 25.6
BolC8t49740H Brassica oleracea HOM05D007494 ORTHO05D009621 5.3e-10 69.7 256 23.4
Thhalv10011090m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 5.3e-10 69.7 244 29.5
C08p21040 Brassica napus HOM05D007494 ORTHO05D009621 6.9e-10 69.3 263 22.4
COL.COLO4_29637 Corchorus olitorius HOM05D000664 ORTHO05D000491 6.9e-10 69.3 241 24.9
QL04p020508 Quercus lobata HOM05D002420 ORTHO05D002422 9.0e-10 68.9 300 24.0
BraA09t39810Z Brassica rapa HOM05D007494 ORTHO05D009621 1.2e-09 68.6 347 24.8
AL1G45220 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.5e-09 68.2 361 22.7
FAN14G4843 Fragaria x ananassa HOM05D000007 ORTHO05D000017 2.0e-09 67.8 273 24.9
Sp5g11780 Schrenkiella parvula HOM05D007494 ORTHO05D009621 2.0e-09 67.8 311 25.7
Aqoxy4G00563 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 2.6e-09 67.4 256 26.6
Carub.0001s2057 Capsella rubella HOM05D007494 ORTHO05D009621 2.6e-09 67.4 243 28.4
COL.COLO4_23193 Corchorus olitorius HOM05D000007 ORTHO05D000521 2.6e-09 67.4 363 21.5
Peaxi162Scf00115g00112 Petunia axillaris HOM05D008697 ORTHO05D010866 4.5e-09 66.6 171 28.7
QL04p019991 Quercus lobata HOM05D002420 ORTHO05D002422 4.5e-09 66.6 300 23.7
Nitab4.5_0000936g0070 Nicotiana tabacum HOM05D008697 ORTHO05D010866 5.8e-09 66.2 114 36.0
AL1G33230 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 7.6e-09 65.9 293 24.2
AT1G20360 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 7.6e-09 65.9 315 23.8
Rhsim01G0013700 Rhododendron simsii HOM05D000664 ORTHO05D000491 7.6e-09 65.9 346 22.0
Sp1g18490 Schrenkiella parvula HOM05D007494 ORTHO05D009621 7.6e-09 65.9 246 25.6
THA.LOC104813248 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 7.6e-09 65.9 345 22.0
BcaC07g39504 Brassica carinata HOM05D007494 ORTHO05D009621 1.3e-08 65.1 140 31.4
C08p25490 Brassica napus HOM05D007494 ORTHO05D009621 1.3e-08 65.1 140 31.4
CAN.G1631.1 Capsicum annuum HOM05D000021 ORTHO05D000010 1.3e-08 65.1 144 30.6
HanXRQChr03g0076041 Helianthus annuus HOM05D000007 ORTHO05D000676 1.3e-08 65.1 307 23.1
AL1G33090 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 2.2e-08 64.3 174 30.5
COL.COLO4_13967 Corchorus olitorius HOM05D000007 ORTHO05D000521 2.2e-08 64.3 247 25.1
Thhalv10015953m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 2.2e-08 64.3 162 26.5
PSO339G3302 Papaver somniferum HOM05D000007 ORTHO05D000676 2.2e-08 64.3 265 23.4
Duzib177G0911 Durio zibethinus HOM05D000007 ORTHO05D001644 2.9e-08 63.9 296 23.6
Thhalv10009430m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 2.9e-08 63.9 175 26.9
BcaC07g39114 Brassica carinata HOM05D007494 ORTHO05D009621 3.8e-08 63.5 140 27.1
Cfa001318 Carpinus fangiana HOM05D003814 ORTHO05D004399 3.8e-08 63.5 325 22.5
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.8e-08 63.5 254 25.6
Aqoxy2G01074 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 4.9e-08 63.2 252 24.6
MELO3C010232.2 Cucumis melo HOM05D002420 ORTHO05D002422 4.9e-08 63.2 242 22.3
Sc08g0007890 Simmondsia chinensis HOM05D000007 ORTHO05D000017 4.9e-08 63.2 220 25.5
AT1G57565 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 6.5e-08 62.8 163 27.0
THA.LOC104801597 Tarenaya hassleriana HOM05D000664 ORTHO05D000491 6.5e-08 62.8 250 22.8
COL.COLO4_34989 Corchorus olitorius HOM05D000007 ORTHO05D000521 8.4e-08 62.4 369 21.7
Lsat_1_v5_gn_9_51421 Lactuca sativa HOM05D000664 ORTHO05D000491 8.4e-08 62.4 300 25.3
PGR031G2441 Punica granatum HOM05D007162 ORTHO05D007631 8.4e-08 62.4 350 23.4
QL04p019597 Quercus lobata HOM05D002420 ORTHO05D002422 8.4e-08 62.4 298 21.8
Rhsim01G0017700 Rhododendron simsii HOM05D000664 ORTHO05D000491 8.4e-08 62.4 269 23.8
BcaB03g11879 Brassica carinata HOM05D007494 ORTHO05D009621 1.1e-07 62.0 152 28.9
Carub.0001s2025 Capsella rubella HOM05D007494 ORTHO05D009621 1.1e-07 62.0 142 30.3
PGR004G1919 Punica granatum HOM05D000007 ORTHO05D000017 1.1e-07 62.0 317 24.3
Cfa000428 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.4e-07 61.6 233 23.2
Medtr3g024110 Medicago truncatula HOM05D000007 ORTHO05D000017 1.4e-07 61.6 250 24.8
PSO339G4005 Papaver somniferum HOM05D000007 ORTHO05D000676 1.4e-07 61.6 293 23.2
AT1G20800 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.9e-07 61.2 147 28.6
Ciclev10005096m.g Citrus clementina HOM05D000664 ORTHO05D000491 1.9e-07 61.2 239 26.4
Nitab4.5_0001180g0260 Nicotiana tabacum HOM05D008697 ORTHO05D010866 1.9e-07 61.2 141 33.3
Sopen09g026680 Solanum pennellii HOM05D008697 ORTHO05D010866 1.9e-07 61.2 124 29.0
TWI53G0525 Tripterygium wilfordii HOM05D003814 ORTHO05D004399 1.9e-07 61.2 243 23.5
TAR371G0292 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.9e-07 61.2 253 25.7
A09p43390 Brassica napus HOM05D007494 ORTHO05D009621 2.5e-07 60.8 180 32.2
Cpa.g.sc42.22 Carica papaya HOM05D002420 ORTHO05D002422 2.5e-07 60.8 301 22.6
Dinv38186 Davidia involucrata HOM05D000007 ORTHO05D000017 3.2e-07 60.5 357 20.2
HanXRQChr03g0074891 Helianthus annuus HOM05D000007 ORTHO05D000676 3.2e-07 60.5 238 24.4
MD04G1162000 Malus domestica HOM05D000007 ORTHO05D000017 3.2e-07 60.5 309 23.0
Nitab4.5_0000430g0090 Nicotiana tabacum HOM05D008697 ORTHO05D010866 3.2e-07 60.5 149 32.9
Psat5g230600 Pisum sativum HOM05D000007 ORTHO05D000017 3.2e-07 60.5 246 25.2
QL04p019108 Quercus lobata HOM05D000007 ORTHO05D000039 3.2e-07 60.5 366 19.1
Aa31LG8G6310 Aethionema arabicum HOM05D001738 ORTHO05D001644 4.2e-07 60.1 241 26.1
CSS0006709 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 4.2e-07 60.1 377 22.5
Cfa000425 Carpinus fangiana HOM05D000007 ORTHO05D000039 4.2e-07 60.1 235 21.3
DCAR_023489 Daucus carota HOM05D000007 ORTHO05D000017 4.2e-07 60.1 261 26.1
Nn8g41008 Nelumbo nucifera HOM05D000664 ORTHO05D000491 4.2e-07 60.1 273 23.8
Psat0s3499g0040 Pisum sativum HOM05D000007 ORTHO05D000521 4.2e-07 60.1 284 22.2
Atru.chr3.38 Acer truncatum HOM05D000007 ORTHO05D000017 5.5e-07 59.7 350 22.3
Thecc.05G282400 Theobroma cacao HOM05D000664 ORTHO05D000491 5.5e-07 59.7 232 26.7
Thecc.09G282200 Theobroma cacao HOM05D002420 ORTHO05D002422 7.1e-07 59.3 284 21.5
TPR.G5959 Trifolium pratense HOM05D002420 ORTHO05D002422 7.1e-07 59.3 247 22.7
TAR626G1986 Trochodendron aralioides HOM05D000664 ORTHO05D000491 7.1e-07 59.3 239 25.5
Aa31LG7G4960 Aethionema arabicum HOM05D007494 ORTHO05D009621 9.3e-07 58.9 373 21.4
CSS0003262 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 9.3e-07 58.9 241 26.6
CSS0006010 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 9.3e-07 58.9 273 23.4
arahy.Tifrunner.gnm1.ann1.7PDR7X Arachis hypogaea HOM05D000007 ORTHO05D000017 1.2e-06 58.5 218 23.9
BraA09t39809Z Brassica rapa HOM05D007494 ORTHO05D009621 1.2e-06 58.5 95 38.9
Haze_06491 Corylus avellana HOM05D000007 ORTHO05D000039 1.2e-06 58.5 166 28.9
HanXRQChr03g0076111 Helianthus annuus HOM05D000664 ORTHO05D000491 1.2e-06 58.5 289 22.1
VMungo1383G2748 Vigna mungo HOM05D000007 ORTHO05D000017 1.2e-06 58.5 246 26.4
FvH4_2g35201 Fragaria vesca HOM05D000007 ORTHO05D000521 1.6e-06 58.2 399 22.8
Peaxi162Scf00332g10027 Petunia axillaris HOM05D000664 ORTHO05D000491 1.6e-06 58.2 242 22.3
CAN.G231.32 Capsicum annuum HOM05D000664 ORTHO05D000491 2.1e-06 57.8 239 25.1
Lj8C594T5 Lonicera japonica HOM05D000007 ORTHO05D000521 2.1e-06 57.8 242 25.2
Prupe.1G147000 Prunus persica HOM05D000007 ORTHO05D000521 2.1e-06 57.8 253 27.7
Rhsim03G0265900 Rhododendron simsii HOM05D000007 ORTHO05D000039 2.1e-06 57.8 247 25.1
CSS0040081 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 2.7e-06 57.4 367 20.4
COL.COLO4_21631 Corchorus olitorius HOM05D000007 ORTHO05D013584 2.7e-06 57.4 208 22.1
Lj2A693T16 Lonicera japonica HOM05D000007 ORTHO05D000017 2.7e-06 57.4 239 24.7
TWI18G1348 Tripterygium wilfordii HOM05D000007 ORTHO05D000521 2.7e-06 57.4 223 24.2
Cfa000427 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.5e-06 57.0 163 25.8
MD13G1148700 Malus domestica HOM05D007162 ORTHO05D007631 3.5e-06 57.0 324 25.0
Manes.03G145200 Manihot esculenta HOM05D000007 ORTHO05D000017 3.5e-06 57.0 215 24.2
Aqoxy5G01482 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 4.6e-06 56.6 258 21.7
BcaC07g39500 Brassica carinata HOM05D007494 ORTHO05D009621 4.6e-06 56.6 160 30.6
Glyma.18G274500 Glycine max HOM05D000007 ORTHO05D000017 4.6e-06 56.6 247 22.7
HanXRQChr03g0076061 Helianthus annuus HOM05D000007 ORTHO05D000676 4.6e-06 56.6 234 24.4
Sp1g18390 Schrenkiella parvula HOM05D007494 ORTHO05D009621 4.6e-06 56.6 166 25.9
Lsat_1_v5_gn_9_51481 Lactuca sativa HOM05D000664 ORTHO05D000491 6.1e-06 56.2 369 22.0
Psat1g024800 Pisum sativum HOM05D000007 ORTHO05D000017 6.1e-06 56.2 255 25.5
Sc23g0006800 Simmondsia chinensis HOM05D000664 ORTHO05D000491 6.1e-06 56.2 372 21.2
COL.COLO4_14580 Corchorus olitorius HOM05D000007 ORTHO05D000017 7.9e-06 55.8 242 22.7
Solyc04g071270.1 Solanum lycopersicum HOM05D000664 ORTHO05D000491 7.9e-06 55.8 242 25.6


User provided reference genes

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