Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu004526.1 Olea europaea HOM05D004612 ORTHO05D004940 7.7e-74 280.4 144 100.0
Oeu014678.1 Olea europaea HOM05D004612 ORTHO05D004940 2.5e-48 195.7 149 71.8
Actinidia09998 Actinidia chinensis HOM05D004612 ORTHO05D004940 1.9e-40 169.5 150 62.7
CAN.G718.1 Capsicum annuum HOM05D004612 ORTHO05D004940 3.3e-40 168.7 153 60.8
Hma1.2p1_0033F.1_g020400 Hydrangea macrophylla HOM05D004612 ORTHO05D004940 3.3e-40 168.7 146 63.0
CSS0006325 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 7.3e-40 167.5 151 61.6
CSS0014629 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 7.3e-40 167.5 151 61.6
Rhsim07G0018100 Rhododendron simsii HOM05D004612 ORTHO05D004940 2.1e-39 166.0 148 61.5
Sopen05g028090 Solanum pennellii HOM05D004612 ORTHO05D004940 8.1e-39 164.1 153 59.5
CSS0046042 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 1.8e-38 162.9 151 60.3
QL08p049561 Quercus lobata HOM05D004612 ORTHO05D004940 1.8e-38 162.9 148 60.8
TAR629G0951 Trochodendron aralioides HOM05D004612 ORTHO05D004940 2.3e-38 162.5 147 59.9
Solyc05g048770.3 Solanum lycopersicum HOM05D004612 ORTHO05D004940 3.1e-38 162.2 147 59.9
Cfa003958 Carpinus fangiana HOM05D004612 ORTHO05D004940 5.2e-38 161.4 152 56.6
Haze_15464 Corylus avellana HOM05D004612 ORTHO05D004940 5.2e-38 161.4 149 58.4
Nn3g17842 Nelumbo nucifera HOM05D004612 ORTHO05D004940 8.9e-38 160.6 145 60.0
Duzib133G0359 Durio zibethinus HOM05D004612 ORTHO05D004940 1.5e-37 159.8 147 59.2
Nitab4.5_0010110g0020 Nicotiana tabacum HOM05D004612 ORTHO05D004940 4.4e-37 158.3 148 58.1
vmacro13313 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 4.4e-37 158.3 151 57.0
Cc02_g37600 Coffea canephora HOM05D004612 ORTHO05D004940 5.8e-37 157.9 152 55.3
Gohir.A11G082600 Gossypium hirsutum HOM05D004612 ORTHO05D004940 7.5e-37 157.5 148 56.8
GSVIVG01026844001 Vitis vinifera HOM05D004612 ORTHO05D004940 7.5e-37 157.5 150 58.7
TWI59G0622 Tripterygium wilfordii HOM05D004612 ORTHO05D004940 9.9e-37 157.1 144 59.0
Ciclev10024326m.g Citrus clementina HOM05D004612 ORTHO05D004940 1.3e-36 156.8 146 58.2
Eucgr.D02267 Eucalyptus grandis HOM05D004612 ORTHO05D004940 1.3e-36 156.8 146 60.3
SalBow3G1907 Salvia bowleyana HOM05D004612 ORTHO05D004940 1.7e-36 156.4 144 60.4
Prupe.2G162500 Prunus persica HOM05D004612 ORTHO05D004940 2.2e-36 156.0 151 58.3
Cpa.g.sc20.34 Carica papaya HOM05D004612 ORTHO05D004940 2.9e-36 155.6 148 58.1
Gorai.007G097300 Gossypium raimondii HOM05D004612 ORTHO05D004940 2.9e-36 155.6 148 56.1
MSTRG.17249 Avicennia marina HOM05D004612 ORTHO05D004940 3.7e-36 155.2 147 59.9
Potri.014G080600 Populus trichocarpa HOM05D004612 ORTHO05D004940 4.9e-36 154.8 154 53.9
Sabra14G0058500 Salix brachista HOM05D004612 ORTHO05D004940 4.9e-36 154.8 148 57.4
TWI59G1187 Tripterygium wilfordii HOM05D004612 ORTHO05D004940 4.9e-36 154.8 144 58.3
Gohir.D11G091300 Gossypium hirsutum HOM05D004612 ORTHO05D004940 6.4e-36 154.5 148 55.4
Nitab4.5_0010827g0010 Nicotiana tabacum HOM05D004612 ORTHO05D004940 6.4e-36 154.5 153 54.2
PGR031G1383 Punica granatum HOM05D004612 ORTHO05D004940 8.3e-36 154.1 153 56.9
Glyma.03G096900 Glycine max HOM05D004612 ORTHO05D004940 1.1e-35 153.7 148 56.1
RcHm_v2.0_Chr1g0353691 Rosa chinensis HOM05D004612 ORTHO05D004940 1.4e-35 153.3 146 59.6
FvH4_7g13631 Fragaria vesca HOM05D004612 ORTHO05D004940 2.4e-35 152.5 153 58.8
FAN10G2510 Fragaria x ananassa HOM05D004612 ORTHO05D004940 2.4e-35 152.5 153 58.8
MBI17_g08173_MAGBIO Magnolia biondii HOM05D004612 ORTHO05D004940 2.4e-35 152.5 148 56.8
MD07G1141600 Malus domestica HOM05D004612 ORTHO05D004940 3.2e-35 152.1 148 60.1
arahy.Tifrunner.gnm1.ann1.4I97V1 Arachis hypogaea HOM05D004612 ORTHO05D004940 5.4e-35 151.4 148 54.7
Nitab4.5_0002608g0040 Nicotiana tabacum HOM05D004612 ORTHO05D004940 5.4e-35 151.4 153 52.9
FAN06G2470 Fragaria x ananassa HOM05D004612 ORTHO05D004940 7.1e-35 151.0 153 58.2
FAN06G3441 Fragaria x ananassa HOM05D004612 ORTHO05D004940 7.1e-35 151.0 153 58.2
Manes.12G065000 Manihot esculenta HOM05D004612 ORTHO05D004940 7.1e-35 151.0 157 54.1
Thecc.01G363500 Theobroma cacao HOM05D004612 ORTHO05D004940 7.1e-35 151.0 151 57.0
Migut.B01722 Erythranthe guttata HOM05D004612 ORTHO05D004940 1.2e-34 150.2 140 60.0
Phvul.011G160800 Phaseolus vulgaris HOM05D004612 ORTHO05D004940 1.6e-34 149.8 148 54.7
COL.COLO4_12673 Corchorus olitorius HOM05D004612 ORTHO05D004940 2.1e-34 149.4 148 56.8
SGA_v2.0_scaffold95G28856 Striga asiatica HOM05D004612 ORTHO05D004940 2.1e-34 149.4 155 58.7
Aqoxy46s002 Aquilegia oxysepala HOM05D004612 ORTHO05D004940 2.7e-34 149.1 151 53.0
VMungo1127G0482 Vigna mungo HOM05D004612 ORTHO05D004940 2.7e-34 149.1 148 54.7
ClCG05G001720 Citrullus lanatus HOM05D004612 ORTHO05D004940 4.6e-34 148.3 146 56.2
FAN03G2220 Fragaria x ananassa HOM05D004612 ORTHO05D004940 7.8e-34 147.5 192 49.0
MD01G1053600 Malus domestica HOM05D004612 ORTHO05D004940 7.8e-34 147.5 146 58.2
DCAR_008600 Daucus carota HOM05D004612 ORTHO05D004940 1.0e-33 147.1 146 55.5
Lalb_Chr10g0097231 Lupinus albus HOM05D004612 ORTHO05D004940 1.0e-33 147.1 148 54.7
AUR62033332 Chenopodium quinoa HOM05D004612 ORTHO05D004940 2.3e-33 146.0 144 53.5
MELO3C006131.2 Cucumis melo HOM05D004612 ORTHO05D004940 2.3e-33 146.0 147 55.1
CsaV3_3G009110 Cucumis sativus L. HOM05D004612 ORTHO05D004940 2.3e-33 146.0 147 55.1
Sed0015875 Sechium edule HOM05D004612 ORTHO05D004940 3.0e-33 145.6 147 55.1
Dinv32447 Davidia involucrata HOM05D004612 ORTHO05D004940 8.6e-33 144.1 124 64.5
Lj3g0020312 Lotus japonicus HOM05D004612 ORTHO05D004940 8.6e-33 144.1 148 53.4
Ca_27541_v3 Cicer arietinum L. HOM05D004612 ORTHO05D004940 1.9e-32 142.9 148 54.7
Thhalv10028700m.g Eutrema salsugineum HOM05D004612 ORTHO05D004940 5.6e-32 141.4 153 51.6
CiPaw.02G028400 Carya illinoinensis HOM05D004612 ORTHO05D004940 7.3e-32 141.0 120 62.5
AT4G00590 Arabidopsis thaliana HOM05D004612 ORTHO05D004940 1.6e-31 139.8 147 51.0
BcaB01g02261 Brassica carinata HOM05D004612 ORTHO05D004940 2.8e-31 139.0 149 53.0
AL6G52840 Arabidopsis lyrata HOM05D004612 ORTHO05D004940 1.4e-30 136.7 147 49.7
Carub.0006s3663 Capsella rubella HOM05D004612 ORTHO05D004940 1.4e-30 136.7 147 49.0
Medtr8g031580 Medicago truncatula HOM05D004612 ORTHO05D004940 1.8e-30 136.3 148 53.4
PSO063G2700 Papaver somniferum HOM05D004612 ORTHO05D004940 1.8e-30 136.3 149 51.7
Psat4g153800 Pisum sativum HOM05D004612 ORTHO05D004940 2.4e-30 136.0 148 52.7
Peaxi162Scf00246g01122 Petunia axillaris HOM05D004612 ORTHO05D004940 3.1e-30 135.6 123 58.5
THA.LOC104801450 Tarenaya hassleriana HOM05D004612 ORTHO05D004940 3.1e-30 135.6 146 49.3
TPR.G4369 Trifolium pratense HOM05D004612 ORTHO05D004940 4.0e-30 135.2 154 52.6
Sc07g0008070 Simmondsia chinensis HOM05D004612 ORTHO05D004940 5.2e-30 134.8 145 51.7
ATR0680G383 Amborella trichopoda HOM05D004612 ORTHO05D004940 1.2e-29 133.7 148 50.7
BraA09t35721Z Brassica rapa HOM05D004612 ORTHO05D004940 2.0e-29 132.9 152 50.0
BcaC04g24158 Brassica carinata HOM05D004612 ORTHO05D004940 3.4e-29 132.1 147 50.3
C09p00500 Brassica napus HOM05D004612 ORTHO05D004940 3.4e-29 132.1 147 50.3
PSO782G5368 Papaver somniferum HOM05D004612 ORTHO05D004940 5.8e-29 131.3 149 50.3
BolC9t52984H Brassica oleracea HOM05D004612 ORTHO05D004940 7.6e-29 131.0 147 49.7
Sp6g00630 Schrenkiella parvula HOM05D004612 ORTHO05D004940 1.3e-28 130.2 147 49.7
HPP92_021103 Vanilla planifolia HOM05D004612 ORTHO05D004940 2.2e-28 129.4 146 51.4
Aa31LG5G400 Aethionema arabicum HOM05D004612 ORTHO05D004940 3.8e-28 128.6 158 47.5
A09p00400 Brassica napus HOM05D004612 ORTHO05D004940 3.8e-28 128.6 147 51.0
Os04g0682500 Oryza sativa ssp. japonica HOM05D004612 ORTHO05D004940 3.8e-28 128.6 150 48.0
HanXRQChr16g0523031 Helianthus annuus HOM05D004612 ORTHO05D004940 1.9e-27 126.3 150 50.7
AUR62004317 Chenopodium quinoa HOM05D004612 ORTHO05D004940 2.4e-27 125.9 123 52.8
CSS0003938 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 3.2e-27 125.6 139 56.8
unitig_0.g1278 Utricularia gibba HOM05D004612 ORTHO05D004940 4.1e-27 125.2 148 50.0
Prupe.8G034000 Prunus persica HOM05D004612 ORTHO05D004940 2.7e-26 122.5 130 56.2
CSS0007536 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 6.0e-26 121.3 118 58.5
Peaxi162Scf00397g00041 Petunia axillaris HOM05D004612 ORTHO05D004940 1.0e-25 120.6 122 54.9
ECA234G1569 Erigeron canadensis HOM05D004612 ORTHO05D004940 1.3e-25 120.2 147 48.3
Zm00001eb433970 Zea mays HOM05D004612 ORTHO05D004940 5.1e-25 118.2 142 47.2
Lj9C580G6 Lonicera japonica HOM05D004612 ORTHO05D004940 8.7e-25 117.5 126 56.3
BcaNung05358 Brassica carinata HOM05D004612 ORTHO05D004940 3.3e-24 115.5 123 52.0
EL10Ac1g00526 Beta vulgaris HOM05D004612 ORTHO05D004940 4.3e-24 115.2 129 50.4
FAN01G1921 Fragaria x ananassa HOM05D000092 ORTHO05D004940 7.3e-24 114.4 174 44.8
CARHR248760 Cardamine hirsuta HOM05D004612 ORTHO05D004940 1.1e-22 110.5 148 44.6
Gohir.D02G148550 Gossypium hirsutum HOM05D004612 ORTHO05D004940 2.4e-22 109.4 141 46.8
BcaB01g02263 Brassica carinata HOM05D004612 ORTHO05D004940 9.0e-22 107.5 147 45.6
vmacro22088 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 9.0e-22 107.5 137 48.9
Lsat_1_v5_gn_4_36480 Lactuca sativa HOM05D004612 ORTHO05D004940 1.2e-21 107.1 138 50.0
Gorai.005G189400 Gossypium raimondii HOM05D004612 ORTHO05D004940 9.9e-21 104.0 140 43.6
vmacro13310 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 1.7e-20 103.2 127 48.8
BcaNung07163 Brassica carinata HOM05D004612 ORTHO05D004940 2.2e-20 102.8 136 43.4
Gorai.005G166700 Gossypium raimondii HOM05D004612 ORTHO05D004940 6.4e-20 101.3 141 42.6
vmacro13422 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 1.9e-19 99.8 146 45.2
AUR62023440 Chenopodium quinoa HOM05D004612 ORTHO05D004940 6.0e-18 94.7 104 50.0
AUR62033327 Chenopodium quinoa HOM05D004612 ORTHO05D004940 6.0e-18 94.7 104 50.0
PGSC0003DMG400021637 Solanum tuberosum HOM05D004612 ORTHO05D004940 1.0e-17 94.0 48 85.4
Atru.chr5.445 Acer truncatum HOM05D004612 ORTHO05D004940 3.3e-16 89.0 46 84.8
Gohir.D02G101800 Gossypium hirsutum HOM05D004612 ORTHO05D004940 4.3e-16 88.6 47 83.0
Ah.05g176430 Amaranthus hybridus HOM05D004612 ORTHO05D004940 7.3e-16 87.8 164 39.6
Gohir.D11G259000 Gossypium hirsutum HOM05D004612 ORTHO05D004940 9.6e-16 87.4 46 84.8
vmacro00164 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 9.6e-16 87.4 117 47.0
Gorai.007G277100 Gossypium raimondii HOM05D004612 ORTHO05D004940 2.8e-15 85.9 46 84.8
AagrBONN_evm.TU.Sc2ySwM_344.1798 Anthoceros agrestis HOM05D004612 ORTHO05D004940 3.6e-15 85.5 142 40.8
Gorai.005G115400 Gossypium raimondii HOM05D004612 ORTHO05D004940 1.1e-14 84.0 46 82.6
CSS0040114 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 3.1e-14 82.4 134 43.3
Mapoly0068s0044 Marchantia polymorpha HOM05D004612 ORTHO05D004940 3.1e-14 82.4 145 40.7
Pp3c10_3850 Physcomitrium patens HOM05D004612 ORTHO05D004940 3.1e-14 82.4 146 38.4
Atru.chr5.446 Acer truncatum HOM05D004612 ORTHO05D004940 2.0e-13 79.7 98 51.0
CDE05G3327 Ceratophyllum demersum HOM05D004612 ORTHO05D004940 2.0e-13 79.7 45 77.8
CSS0037024 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 3.8e-12 75.5 125 40.8
Hund16942 Selenicereus undatus HOM05D004612 ORTHO05D004940 4.9e-12 75.1 68 55.9
Nitab4.5_0000094g0210 Nicotiana tabacum HOM05D004612 ORTHO05D004940 8.4e-12 74.3 100 45.0
CSS0015544 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 3.2e-11 72.4 57 64.9
HPP92_021084 Vanilla planifolia HOM05D004612 ORTHO05D004940 5.4e-11 71.6 131 37.4
CARHR288840 Cardamine hirsuta HOM05D004612 ORTHO05D004940 7.9e-10 67.8 45 68.9
SMO364G0809 Selaginella moellendorffii HOM05D004612 ORTHO05D004940 8.7e-09 64.3 143 36.4
BraA09t39921Z Brassica rapa HOM05D000302 ORTHO05D001604 4.3e-08 62.0 42 64.3
vmacro13311 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 4.3e-08 62.0 44 68.2
CDE05G2136 Ceratophyllum demersum HOM05D004612 ORTHO05D004940 4.0e-06 55.5 57 52.6


User provided reference genes

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