Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu004426.1 Olea europaea HOM05D000113 ORTHO05D001108 1.2e-52 209.5 102 100.0
Oeu027041.1 Olea europaea HOM05D000113 ORTHO05D001108 6.8e-16 87.4 49 85.7
Eucgr.G02652 Eucalyptus grandis HOM05D000113 ORTHO05D001108 5.4e-13 77.8 49 71.4
GSVIVG01034780001 Vitis vinifera HOM05D000113 ORTHO05D001108 5.4e-13 77.8 49 73.5
CANSAT56G2591 Cannabis sativa HOM05D000113 ORTHO05D001108 9.2e-13 77.0 49 71.4
Cfa010461 Carpinus fangiana HOM05D000113 ORTHO05D001108 9.2e-13 77.0 48 72.9
QL04p049911 Quercus lobata HOM05D000113 ORTHO05D001108 9.2e-13 77.0 48 70.8
CiPaw.13G046500 Carya illinoinensis HOM05D000113 ORTHO05D001108 1.2e-12 76.6 48 72.9
Prupe.2G065300 Prunus persica HOM05D000113 ORTHO05D001108 1.6e-12 76.3 49 71.4
Duzib114G0219 Durio zibethinus HOM05D000113 ORTHO05D001108 2.0e-12 75.9 49 71.4
CAN.G388.51 Capsicum annuum HOM05D000113 ORTHO05D001108 4.6e-12 74.7 48 70.8
CARHR208370 Cardamine hirsuta HOM05D000113 ORTHO05D001108 4.6e-12 74.7 84 47.6
Nitab4.5_0001613g0020 Nicotiana tabacum HOM05D000113 ORTHO05D001108 4.6e-12 74.7 48 70.8
MSTRG.5088 Avicennia marina HOM05D000113 ORTHO05D001108 6.0e-12 74.3 48 70.8
VMungo1127G1820 Vigna mungo HOM05D000113 ORTHO05D001108 6.0e-12 74.3 49 69.4
FvH4_5g28161 Fragaria vesca HOM05D000113 ORTHO05D001108 7.8e-12 73.9 49 71.4
FAN04G0273 Fragaria x ananassa HOM05D000113 ORTHO05D001108 7.8e-12 73.9 49 71.4
FAN18G2522 Fragaria x ananassa HOM05D004560 ORTHO05D005540 7.8e-12 73.9 49 71.4
MD04G1078800 Malus domestica HOM05D000113 ORTHO05D001108 7.8e-12 73.9 49 67.3
Nitab4.5_0001042g0030 Nicotiana tabacum HOM05D000113 ORTHO05D001108 7.8e-12 73.9 48 68.8
PGR142G2761 Punica granatum HOM05D000113 ORTHO05D001108 7.8e-12 73.9 48 72.9
Dinv04120 Davidia involucrata HOM05D000113 ORTHO05D001108 1.0e-11 73.6 48 68.8
Glyma.08G229400 Glycine max HOM05D000113 ORTHO05D001108 1.3e-11 73.2 49 67.3
Glyma.15G216000 Glycine max HOM05D000113 ORTHO05D001108 1.3e-11 73.2 49 67.3
Thecc.10G125600 Theobroma cacao HOM05D000113 ORTHO05D001108 1.3e-11 73.2 49 69.4
Actinidia18369 Actinidia chinensis HOM05D000113 ORTHO05D001108 1.7e-11 72.8 48 70.8
Aa31LG11G5810 Aethionema arabicum HOM05D000113 ORTHO05D001108 1.7e-11 72.8 84 46.4
Lsat_1_v5_gn_5_36980 Lactuca sativa HOM05D000113 ORTHO05D001108 1.7e-11 72.8 50 68.0
RcHm_v2.0_Chr4g0406081 Rosa chinensis HOM05D000113 ORTHO05D001108 1.7e-11 72.8 49 69.4
vmacro20087 Vaccinium macrocarpon HOM05D000113 ORTHO05D001108 1.7e-11 72.8 49 71.4
Migut.N01899 Erythranthe guttata HOM05D000113 ORTHO05D001108 2.3e-11 72.4 46 73.9
Thhalv10012492m.g Eutrema salsugineum HOM05D000113 ORTHO05D001108 2.3e-11 72.4 84 46.4
CSS0005075 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D001108 3.0e-11 72.0 48 70.8
CSS0034412 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D001108 3.0e-11 72.0 48 70.8
Ca_24136_v3 Cicer arietinum L. HOM05D000113 ORTHO05D001108 3.0e-11 72.0 49 65.3
COL.COLO4_20819 Corchorus olitorius HOM05D000113 ORTHO05D001108 3.0e-11 72.0 49 67.3
Lalb_Chr01g0007651 Lupinus albus HOM05D000113 ORTHO05D001108 3.0e-11 72.0 49 67.3
SGA_v2.0_scaffold196G40981 Striga asiatica HOM05D000113 ORTHO05D001108 3.0e-11 72.0 47 72.3
TPR.G7935 Trifolium pratense HOM05D000113 ORTHO05D001108 3.0e-11 72.0 117 38.5
AT5G04895 Arabidopsis thaliana HOM05D000113 ORTHO05D001108 3.9e-11 71.6 45 71.1
Manes.09G097700 Manihot esculenta HOM05D000113 ORTHO05D001108 3.9e-11 71.6 49 65.3
DCAR_006632 Daucus carota HOM05D000113 ORTHO05D001108 6.6e-11 70.9 48 68.8
Psat4g189280 Pisum sativum HOM05D000113 ORTHO05D001108 6.6e-11 70.9 49 63.3
BolC9t59935H Brassica oleracea HOM05D000113 ORTHO05D001108 8.6e-11 70.5 61 59.0
Medtr8g044260 Medicago truncatula HOM05D000113 ORTHO05D001108 8.6e-11 70.5 49 63.3
Nn7g37936 Nelumbo nucifera HOM05D000113 ORTHO05D001108 8.6e-11 70.5 49 65.3
Phvul.011G185300 Phaseolus vulgaris HOM05D000113 ORTHO05D001108 8.6e-11 70.5 52 63.5
Sp6g37920 Schrenkiella parvula HOM05D000113 ORTHO05D001108 8.6e-11 70.5 84 45.2
Lj3g0019572 Lotus japonicus HOM05D000113 ORTHO05D001108 1.1e-10 70.1 49 65.3
Aqoxy1G00541 Aquilegia oxysepala HOM05D000113 ORTHO05D001108 1.5e-10 69.7 49 67.3
arahy.Tifrunner.gnm1.ann1.M16X7S Arachis hypogaea HOM05D000113 ORTHO05D001108 1.9e-10 69.3 49 63.3
arahy.Tifrunner.gnm1.ann1.UQ25ER Arachis hypogaea HOM05D000113 ORTHO05D001108 1.9e-10 69.3 49 63.3
THA.LOC104826958 Tarenaya hassleriana HOM05D000113 ORTHO05D001108 1.9e-10 69.3 45 68.9
Ah.06g187870 Amaranthus hybridus HOM05D000113 ORTHO05D001108 2.5e-10 68.9 47 66.0
AL6G14580 Arabidopsis lyrata HOM05D000113 ORTHO05D001108 2.5e-10 68.9 44 70.5
Peaxi162Scf00210g00107 Petunia axillaris HOM05D000113 ORTHO05D001108 2.5e-10 68.9 48 64.6
Psat5g029480 Pisum sativum HOM05D000113 ORTHO05D001108 2.5e-10 68.9 49 61.2
Solyc01g006710.4 Solanum lycopersicum HOM05D000113 ORTHO05D001108 2.5e-10 68.9 44 72.7
Sopen01g002700 Solanum pennellii HOM05D000113 ORTHO05D001108 2.5e-10 68.9 44 72.7
PGSC0003DMG400021378 Solanum tuberosum HOM05D000113 ORTHO05D001108 2.5e-10 68.9 44 72.7
TAR623G1516 Trochodendron aralioides HOM05D000113 ORTHO05D001108 2.5e-10 68.9 50 64.0
SalBow4G2548 Salvia bowleyana HOM05D000113 ORTHO05D001108 3.3e-10 68.6 47 70.2
TWI38G2001 Tripterygium wilfordii HOM05D000113 ORTHO05D001108 3.3e-10 68.6 43 74.4
BcaC06g32198 Brassica carinata HOM05D000113 ORTHO05D001108 4.3e-10 68.2 84 45.2
unitig_52.g17388 Utricularia gibba HOM05D000113 ORTHO05D001108 4.3e-10 68.2 56 55.4
PSO339G2261 Papaver somniferum HOM05D000113 ORTHO05D001108 5.6e-10 67.8 44 72.7
PSO384G3003 Papaver somniferum HOM05D000113 ORTHO05D001108 5.6e-10 67.8 44 72.7
Potri.010G246000 Populus trichocarpa HOM05D000113 ORTHO05D001108 5.6e-10 67.8 48 66.7
Cpa.g.sc54.52 Carica papaya HOM05D000113 ORTHO05D001108 7.3e-10 67.4 44 65.9
RhsimUnG0121100 Rhododendron simsii HOM05D000113 ORTHO05D001108 7.3e-10 67.4 48 68.8
Cc00_g06480 Coffea canephora HOM05D000113 ORTHO05D001108 9.5e-10 67.0 48 66.7
BraA10t45168Z Brassica rapa HOM05D000113 ORTHO05D001108 1.6e-09 66.2 55 60.0
Carub.0006s0382 Capsella rubella HOM05D000113 ORTHO05D001108 2.1e-09 65.9 44 65.9
Lj9C663G5 Lonicera japonica HOM05D000113 ORTHO05D001108 2.1e-09 65.9 40 72.5
Atru.chr12.1166 Acer truncatum HOM05D000113 ORTHO05D001108 2.8e-09 65.5 44 65.9
ClCG05G022130 Citrullus lanatus HOM05D000113 ORTHO05D001108 3.6e-09 65.1 55 58.2
HanXRQChr12g0379711 Helianthus annuus HOM05D000113 ORTHO05D001108 3.6e-09 65.1 50 62.0
Potri.008G014100 Populus trichocarpa HOM05D000113 ORTHO05D001108 3.6e-09 65.1 48 60.4
Sabra08G0008800 Salix brachista HOM05D000113 ORTHO05D001108 3.6e-09 65.1 48 60.4
AUR62034144 Chenopodium quinoa HOM05D000113 ORTHO05D001108 4.7e-09 64.7 49 61.2
TPR.G14595 Trifolium pratense HOM05D000113 ORTHO05D001108 4.7e-09 64.7 49 59.2
EL10Ac4g08754 Beta vulgaris HOM05D000113 ORTHO05D001108 1.1e-08 63.5 49 59.2
Sed0014042 Sechium edule HOM05D000113 ORTHO05D001108 1.1e-08 63.5 55 58.2
C09p71860 Brassica napus HOM05D000113 ORTHO05D001108 1.4e-08 63.2 55 58.2
AUR62014291 Chenopodium quinoa HOM05D000113 ORTHO05D001108 1.4e-08 63.2 49 59.2
Gohir.A05G395700 Gossypium hirsutum HOM05D000113 ORTHO05D001108 1.4e-08 63.2 49 61.2
Gohir.D04G019300 Gossypium hirsutum HOM05D000113 ORTHO05D001108 1.4e-08 63.2 49 61.2
Gorai.012G023100 Gossypium raimondii HOM05D000113 ORTHO05D001108 1.4e-08 63.2 49 61.2
ECA246G1971 Erigeron canadensis HOM05D000113 ORTHO05D001108 1.8e-08 62.8 50 62.0
A10p31240 Brassica napus HOM05D000113 ORTHO05D001108 6.8e-08 60.8 81 44.4
Ciclev10024744m.g Citrus clementina HOM05D000113 ORTHO05D001108 6.8e-08 60.8 48 60.4
Os03g0748800 Oryza sativa ssp. japonica HOM05D000113 ORTHO05D001108 1.2e-07 60.1 59 50.8
ATR0697G124 Amborella trichopoda HOM05D000113 ORTHO05D001108 1.5e-07 59.7 47 59.6
Hund22256 Selenicereus undatus HOM05D000113 ORTHO05D001108 2.0e-07 59.3 52 53.8
MBI05_g30082_MAGBIO Magnolia biondii HOM05D000113 ORTHO05D001108 2.6e-07 58.9 84 41.7
MD17G1266200 Malus domestica HOM05D000113 ORTHO05D001108 2.6e-07 58.9 49 61.2
SEGI_09867 Sequoiadendron giganteum HOM05D000113 ORTHO05D001108 2.6e-07 58.9 40 65.0
HPP92_020256 Vanilla planifolia HOM05D000113 ORTHO05D001108 3.4e-07 58.5 40 65.0
CDE01G0119 Ceratophyllum demersum HOM05D000113 ORTHO05D001108 5.8e-07 57.8 51 51.0
MELO3C012311.2 Cucumis melo HOM05D000113 ORTHO05D001108 5.8e-07 57.8 40 67.5
CsaV3_5G035010 Cucumis sativus L. HOM05D000113 ORTHO05D001108 5.8e-07 57.8 40 67.5
Zm00001eb057210 Zea mays HOM05D000113 ORTHO05D001108 1.7e-06 56.2 61 47.5


User provided reference genes

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