Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu004200.1 Olea europaea HOM05D007223 ORTHO05D008932 4.0e-75 284.6 142 100.0
Oeu042168.1 Olea europaea HOM05D007223 ORTHO05D008932 1.1e-64 250.0 145 86.9
CSS0040203 Camellia sinensis var. sinensis HOM05D007223 ORTHO05D008932 6.7e-46 187.6 155 65.2
Dinv41246 Davidia involucrata HOM05D007223 ORTHO05D008932 1.1e-45 186.8 155 65.8
Manes.14G153900 Manihot esculenta HOM05D007223 ORTHO05D008932 3.4e-42 175.3 145 64.8
Cc06_g13230 Coffea canephora HOM05D007223 ORTHO05D008932 6.5e-41 171.0 154 62.3
MSTRG.6217 Avicennia marina HOM05D007223 ORTHO05D008932 8.5e-41 170.6 164 62.8
Ciclev10010470m.g Citrus clementina HOM05D007223 ORTHO05D008932 1.9e-40 169.5 134 65.7
Dinv42721 Davidia involucrata HOM05D007223 ORTHO05D008932 2.1e-39 166.0 154 61.7
Dinv43380 Davidia involucrata HOM05D007223 ORTHO05D008932 2.1e-39 166.0 154 61.7
Duzib168G2276 Durio zibethinus HOM05D007223 ORTHO05D008932 6.1e-39 164.5 152 65.8
Duzib170G0975 Durio zibethinus HOM05D007223 ORTHO05D008932 6.1e-39 164.5 151 59.6
Thecc.09G177700 Theobroma cacao HOM05D007223 ORTHO05D008932 1.4e-38 163.3 153 61.4
Potri.018G092300 Populus trichocarpa HOM05D007223 ORTHO05D008932 1.8e-38 162.9 151 62.9
Prupe.1G085900 Prunus persica HOM05D007223 ORTHO05D008932 1.8e-38 162.9 143 62.2
QL02p097776 Quercus lobata HOM05D007223 ORTHO05D008932 3.0e-38 162.2 151 63.6
Gorai.004G099600 Gossypium raimondii HOM05D007223 ORTHO05D008932 3.9e-38 161.8 148 58.8
TAR383G1061 Trochodendron aralioides HOM05D007223 ORTHO05D008932 3.9e-38 161.8 154 60.4
Gohir.A08G084300 Gossypium hirsutum HOM05D007223 ORTHO05D008932 5.2e-38 161.4 148 58.8
Lalb_Chr07g0180471 Lupinus albus HOM05D007223 ORTHO05D008932 1.1e-37 160.2 145 60.0
Cpa.g.sc233.11 Carica papaya HOM05D007223 ORTHO05D008932 1.5e-37 159.8 152 58.6
CiPaw.08G036200 Carya illinoinensis HOM05D007223 ORTHO05D008932 1.5e-37 159.8 142 63.4
Sabra06G0129600 Salix brachista HOM05D007223 ORTHO05D008932 1.5e-37 159.8 149 60.4
arahy.Tifrunner.gnm1.ann1.LBMC6N Arachis hypogaea HOM05D007223 ORTHO05D008932 2.6e-37 159.1 160 58.1
Gohir.D08G093900 Gossypium hirsutum HOM05D007223 ORTHO05D008932 2.6e-37 159.1 148 58.1
Cfa013503 Carpinus fangiana HOM05D007223 ORTHO05D008932 3.3e-37 158.7 143 62.9
COL.COLO4_37700 Corchorus olitorius HOM05D007223 ORTHO05D008932 3.3e-37 158.7 173 54.3
AL8G33400 Arabidopsis lyrata HOM05D007223 ORTHO05D008932 7.4e-37 157.5 157 56.7
MD13G1253600 Malus domestica HOM05D007223 ORTHO05D008932 7.4e-37 157.5 149 61.1
Potri.006G166900 Populus trichocarpa HOM05D007223 ORTHO05D008932 7.4e-37 157.5 152 59.2
Atru.chr7.623 Acer truncatum HOM05D007223 ORTHO05D008932 9.7e-37 157.1 150 60.0
Actinidia04146 Actinidia chinensis HOM05D007223 ORTHO05D008932 9.7e-37 157.1 142 63.4
AT5G57420 Arabidopsis thaliana HOM05D007223 ORTHO05D008932 1.7e-36 156.4 157 56.1
Phvul.003G145600 Phaseolus vulgaris HOM05D007223 ORTHO05D008932 1.7e-36 156.4 146 63.0
arahy.Tifrunner.gnm1.ann1.1E3WXN Arachis hypogaea HOM05D007223 ORTHO05D008932 2.2e-36 156.0 165 57.0
VMungo1215G0104 Vigna mungo HOM05D007223 ORTHO05D008932 2.2e-36 156.0 145 60.0
RcHm_v2.0_Chr4g0402441 Rosa chinensis HOM05D007223 ORTHO05D008932 3.7e-36 155.2 147 60.5
CARHR271220 Cardamine hirsuta HOM05D007223 ORTHO05D008932 4.8e-36 154.8 154 56.5
FAN22G1200 Fragaria x ananassa HOM05D007223 ORTHO05D008932 8.2e-36 154.1 145 61.4
GSVIVG01029215001 Vitis vinifera HOM05D007223 ORTHO05D008932 1.1e-35 153.7 141 58.2
MSTRG.19707 Avicennia marina HOM05D007223 ORTHO05D008932 1.4e-35 153.3 161 55.9
Haze_22095 Corylus avellana HOM05D007223 ORTHO05D008932 1.4e-35 153.3 143 59.4
FAN17G0481 Fragaria x ananassa HOM05D007223 ORTHO05D008932 1.4e-35 153.3 146 61.6
FAN07G1685 Fragaria x ananassa HOM05D007223 ORTHO05D008932 2.4e-35 152.5 146 62.3
FAN12G3200 Fragaria x ananassa HOM05D007223 ORTHO05D008932 3.1e-35 152.1 147 61.9
TAR625G0650 Trochodendron aralioides HOM05D007223 ORTHO05D008932 4.1e-35 151.8 152 55.3
Rhsim01G0004500 Rhododendron simsii HOM05D007223 ORTHO05D008932 5.3e-35 151.4 144 61.1
Carub.0008s1794 Capsella rubella HOM05D007223 ORTHO05D008932 7.0e-35 151.0 154 57.1
FvH4_4g08200 Fragaria vesca HOM05D007223 ORTHO05D008932 7.0e-35 151.0 147 61.9
Hma1.2p1_1025F.1_g249310 Hydrangea macrophylla HOM05D007223 ORTHO05D008932 7.0e-35 151.0 177 54.8
Peaxi162Scf00231g00621 Petunia axillaris HOM05D007223 ORTHO05D008932 7.0e-35 151.0 149 59.7
BraA02t05920Z Brassica rapa HOM05D007223 ORTHO05D008932 9.1e-35 150.6 152 58.6
A02p08480 Brassica napus HOM05D007223 ORTHO05D008932 1.2e-34 150.2 152 58.6
Eucgr.C02329 Eucalyptus grandis HOM05D007223 ORTHO05D008932 1.6e-34 149.8 155 55.5
Thhalv10015874m.g Eutrema salsugineum HOM05D007223 ORTHO05D008932 1.6e-34 149.8 153 56.9
THA.LOC104817792 Tarenaya hassleriana HOM05D007223 ORTHO05D008932 1.6e-34 149.8 145 60.0
C02p14240 Brassica napus HOM05D007223 ORTHO05D008932 2.6e-34 149.1 152 57.9
BolC2t07548H Brassica oleracea HOM05D007223 ORTHO05D008932 2.6e-34 149.1 152 57.9
Nn8g40486 Nelumbo nucifera HOM05D007223 ORTHO05D008932 2.6e-34 149.1 150 57.3
THA.LOC104813522 Tarenaya hassleriana HOM05D007223 ORTHO05D008932 4.5e-34 148.3 138 58.7
BcaC03g14153 Brassica carinata HOM05D007223 ORTHO05D008932 5.9e-34 147.9 153 57.5
vmacro13125 Vaccinium macrocarpon HOM05D007223 ORTHO05D008932 5.9e-34 147.9 145 60.7
Lj4g0003272 Lotus japonicus HOM05D007223 ORTHO05D008932 7.7e-34 147.5 140 63.6
BcaB08g36098 Brassica carinata HOM05D007223 ORTHO05D008932 1.3e-33 146.7 144 60.4
Aa31LG3G13310 Aethionema arabicum HOM05D007223 ORTHO05D008932 3.8e-33 145.2 149 58.4
Ca_21226_v3 Cicer arietinum L. HOM05D007223 ORTHO05D008932 3.8e-33 145.2 132 59.8
BcaC04g19969 Brassica carinata HOM05D007223 ORTHO05D008932 5.0e-33 144.8 128 64.1
BolC9t57780H Brassica oleracea HOM05D007223 ORTHO05D008932 5.0e-33 144.8 149 57.7
BraA10t43566Z Brassica rapa HOM05D007223 ORTHO05D008932 5.0e-33 144.8 149 57.7
Lalb_Chr13g0300221 Lupinus albus HOM05D007223 ORTHO05D008932 5.0e-33 144.8 142 57.7
SalBow6G4081 Salvia bowleyana HOM05D007223 ORTHO05D008932 5.0e-33 144.8 140 55.7
Sp6g19140 Schrenkiella parvula HOM05D007223 ORTHO05D008932 1.1e-32 143.7 152 54.6
A10p14870 Brassica napus HOM05D007223 ORTHO05D008932 1.9e-32 142.9 127 63.8
C09p49290 Brassica napus HOM05D007223 ORTHO05D008932 1.9e-32 142.9 127 63.8
Migut.J01482 Erythranthe guttata HOM05D007223 ORTHO05D008932 1.0e-30 137.1 152 57.9
MBI14_g17369_MAGBIO Magnolia biondii HOM05D003252 ORTHO05D003640 1.4e-30 136.7 92 72.8
BcaB05g22346 Brassica carinata HOM05D007223 ORTHO05D008932 1.8e-30 136.3 157 53.5
Medtr4g128070 Medicago truncatula HOM05D007223 ORTHO05D008932 5.2e-30 134.8 99 76.8
ATR0580G272 Amborella trichopoda HOM05D007223 ORTHO05D008932 3.3e-29 132.1 143 53.1
PGR102G0813 Punica granatum HOM05D007223 ORTHO05D008932 4.4e-29 131.7 96 71.9
Psat4g012360 Pisum sativum HOM05D007223 ORTHO05D008932 7.5e-29 131.0 88 77.3
CANSAT11G1503 Cannabis sativa HOM05D007223 ORTHO05D008932 9.7e-29 130.6 88 72.7
MELO3C004026.2 Cucumis melo HOM05D007223 ORTHO05D008932 9.7e-29 130.6 83 72.3
SGA_v2.0_scaffold69G23253 Striga asiatica HOM05D007223 ORTHO05D008932 9.7e-29 130.6 136 53.7
MBI16_g39833_MAGBIO Magnolia biondii HOM05D007223 ORTHO05D008932 1.3e-28 130.2 101 68.3
TPR.G5371 Trifolium pratense HOM05D007223 ORTHO05D008932 1.3e-28 130.2 91 76.9
Lj5C7T1 Lonicera japonica HOM05D007223 ORTHO05D008932 4.8e-28 128.3 145 55.2
Lj5C590T0 Lonicera japonica HOM05D007223 ORTHO05D008932 1.1e-27 127.1 145 54.5
ClCG11G012160 Citrullus lanatus HOM05D007223 ORTHO05D008932 1.4e-27 126.7 85 70.6
CsaV3_2G008380 Cucumis sativus L. HOM05D007223 ORTHO05D008932 2.4e-27 125.9 83 71.1
HanXRQChr10g0308641 Helianthus annuus HOM05D007223 ORTHO05D008932 3.1e-27 125.6 135 52.6
Lsat_1_v5_gn_5_85421 Lactuca sativa HOM05D007223 ORTHO05D008932 7.0e-27 124.4 90 65.6
DCAR_014699 Daucus carota HOM05D007223 ORTHO05D008932 2.0e-26 122.9 88 75.0
Sed0023808 Sechium edule HOM05D007223 ORTHO05D008932 2.0e-26 122.9 84 67.9
EL10Ac8g18282 Beta vulgaris HOM05D007223 ORTHO05D008932 2.9e-25 119.0 163 45.4
Os04g0653300 Oryza sativa ssp. japonica HOM05D007223 ORTHO05D008932 2.9e-25 119.0 99 62.6
PGSC0003DMG400043142 Solanum tuberosum HOM05D007223 ORTHO05D008932 2.9e-25 119.0 144 49.3
PSO782G5105 Papaver somniferum HOM05D007223 ORTHO05D008932 3.8e-25 118.6 101 62.4
Solyc07g019450.3 Solanum lycopersicum HOM05D007223 ORTHO05D008932 5.0e-25 118.2 83 71.1
AUR62033216 Chenopodium quinoa HOM05D007223 ORTHO05D008932 8.5e-25 117.5 151 47.0
ECA234G1236 Erigeron canadensis HOM05D007223 ORTHO05D008932 3.6e-23 112.1 85 64.7
SEGI_39293 Sequoiadendron giganteum HOM05D007223 ORTHO05D008932 2.8e-20 102.4 84 63.1
HPP92_017414 Vanilla planifolia HOM05D007223 ORTHO05D008932 1.1e-19 100.5 141 39.7
Zm00001eb432400 Zea mays HOM05D007223 ORTHO05D008932 7.0e-19 97.8 100 49.0
Nitab4.5_0001972g0010 Nicotiana tabacum HOM05D007223 ORTHO05D008932 5.5e-16 88.2 61 72.1
Glyma.20G083900 Glycine max HOM05D007223 ORTHO05D008932 9.8e-13 77.4 105 49.5
SEGI_19995 Sequoiadendron giganteum HOM05D007223 ORTHO05D008932 2.0e-10 69.7 91 46.2
SMO170G0055 Selaginella moellendorffii HOM05D058183 ORTHO05D008932 2.7e-10 69.3 72 52.8
SMO141G0094 Selaginella moellendorffii HOM05D058183 ORTHO05D008932 3.5e-10 68.9 72 52.8
Mapoly0013s0010 Marchantia polymorpha HOM05D007223 ORTHO05D008932 4.5e-10 68.6 79 44.3
Aa31LG2G21740 Aethionema arabicum HOM05D000117 ORTHO05D000070 1.9e-08 63.2 77 39.0
Aqoxy7G03081 Aquilegia oxysepala HOM05D007223 ORTHO05D008932 3.3e-08 62.4 47 68.1
CBR_g19697 Chara braunii HOM05D000117 ORTHO05D008932 5.6e-08 61.6 91 35.2
AagrBONN_evm.TU.Sc2ySwM_117.1187 Anthoceros agrestis HOM05D007223 ORTHO05D008932 2.8e-07 59.3 82 43.9
CBR_g39692 Chara braunii HOM05D000117 ORTHO05D000070 2.8e-07 59.3 82 37.8
MBI03_g18679_MAGBIO Magnolia biondii HOM05D000117 ORTHO05D000070 1.0e-06 57.4 78 38.5
THA.LOC104804036 Tarenaya hassleriana HOM05D000117 ORTHO05D000070 1.4e-06 57.0 78 39.7
ClCG07G001390 Citrullus lanatus HOM05D000117 ORTHO05D000070 4.0e-06 55.5 84 35.7
arahy.Tifrunner.gnm1.ann1.LI3NQ1 Arachis hypogaea HOM05D000117 ORTHO05D000070 6.8e-06 54.7 78 39.7
THA.LOC104814530 Tarenaya hassleriana HOM05D000117 ORTHO05D000070 8.9e-06 54.3 83 38.6


User provided reference genes

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