Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu004196.1 Olea europaea HOM05D003020 ORTHO05D003226 1.3e-135 486.5 258 100.0
Oeu042166.1 Olea europaea HOM05D003020 ORTHO05D003226 2.4e-94 349.4 263 74.9
Oeu025224.1 Olea europaea HOM05D003020 ORTHO05D003226 3.7e-42 176.0 228 49.1
Hma1.2p1_1025F.1_g249270 Hydrangea macrophylla HOM05D003020 ORTHO05D003226 7.7e-40 168.3 239 50.6
SalBow6G2220 Salvia bowleyana HOM05D003020 ORTHO05D003226 7.7e-40 168.3 252 49.6
Dinv41250 Davidia involucrata HOM05D003020 ORTHO05D003226 6.5e-39 165.2 232 48.7
MSTRG.6214 Avicennia marina HOM05D003020 ORTHO05D003226 1.2e-37 161.0 200 50.0
CiPaw.08G036400 Carya illinoinensis HOM05D003020 ORTHO05D003226 2.1e-37 160.2 230 47.4
Migut.J01478 Erythranthe guttata HOM05D003020 ORTHO05D003226 7.9e-37 158.3 276 47.5
Haze_22098 Corylus avellana HOM05D003020 ORTHO05D003226 1.5e-35 154.1 235 48.5
Cfa013505 Carpinus fangiana HOM05D003020 ORTHO05D003226 1.3e-34 151.0 234 47.0
CiPaw.07G192300 Carya illinoinensis HOM05D003020 ORTHO05D003226 2.2e-34 150.2 246 43.9
Actinidia04141 Actinidia chinensis HOM05D003020 ORTHO05D003226 2.4e-33 146.7 252 44.0
CiPaw.05G049400 Carya illinoinensis HOM05D003020 ORTHO05D003226 3.1e-33 146.4 246 45.9
TAR625G0330 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.5e-32 144.1 233 42.1
Prupe.1G086100 Prunus persica HOM05D003020 ORTHO05D003226 2.6e-32 143.3 263 41.4
FvH4_4g08220 Fragaria vesca HOM05D003020 ORTHO05D003226 1.7e-31 140.6 242 43.8
FAN12G0399 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.7e-31 140.6 242 43.8
Thecc.09G173200 Theobroma cacao HOM05D003020 ORTHO05D003226 2.2e-31 140.2 239 44.4
Cpa.g.sc95.49 Carica papaya HOM05D003020 ORTHO05D003226 2.9e-31 139.8 244 44.3
RcHm_v2.0_Chr4g0402471 Rosa chinensis HOM05D003020 ORTHO05D003226 3.8e-31 139.4 261 42.9
Potri.006G168400 Populus trichocarpa HOM05D003020 ORTHO05D003226 1.1e-30 137.9 236 44.5
Gohir.A08G084400 Gossypium hirsutum HOM05D003020 ORTHO05D003226 1.4e-30 137.5 243 42.8
DCAR_017969 Daucus carota HOM05D003020 ORTHO05D003226 3.2e-30 136.3 257 42.0
Potri.018G092800 Populus trichocarpa HOM05D003020 ORTHO05D003226 3.2e-30 136.3 237 46.4
TAR636G2901 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.2e-30 136.3 240 40.0
Duzib170G0355 Durio zibethinus HOM05D003020 ORTHO05D003226 4.2e-30 136.0 235 40.9
FAN07G1960 Fragaria x ananassa HOM05D003020 ORTHO05D003226 7.2e-30 135.2 264 40.9
Duzib168G2116 Durio zibethinus HOM05D003020 ORTHO05D003226 9.4e-30 134.8 241 40.2
FAN17G2997 Fragaria x ananassa HOM05D003020 ORTHO05D003226 9.4e-30 134.8 240 43.3
FAN22G0428 Fragaria x ananassa HOM05D003020 ORTHO05D003226 9.4e-30 134.8 264 42.0
Ca_21174_v3 Cicer arietinum L. HOM05D003020 ORTHO05D003226 1.2e-29 134.4 241 41.1
Ca_21223_v3 Cicer arietinum L. HOM05D003020 ORTHO05D003226 1.2e-29 134.4 241 41.1
Gohir.D08G094000 Gossypium hirsutum HOM05D003020 ORTHO05D003226 1.2e-29 134.4 243 42.8
COL.COLO4_35897 Corchorus olitorius HOM05D003020 ORTHO05D003226 2.1e-29 133.7 243 43.6
CANSAT11G1249 Cannabis sativa HOM05D003020 ORTHO05D003226 2.7e-29 133.3 248 43.1
Dinv42724 Davidia involucrata HOM05D003020 ORTHO05D003226 7.9e-29 131.7 258 41.1
Dinv43377 Davidia involucrata HOM05D003020 ORTHO05D003226 7.9e-29 131.7 258 41.1
Sed0018084 Sechium edule HOM05D003020 ORTHO05D003226 2.3e-28 130.2 234 46.2
Medtr4g128160 Medicago truncatula HOM05D003020 ORTHO05D003226 3.9e-28 129.4 241 42.3
Lj9P685T21 Lonicera japonica HOM05D003020 ORTHO05D003226 5.1e-28 129.0 213 44.6
MD13G1253900 Malus domestica HOM05D003020 ORTHO05D003226 6.7e-28 128.6 240 40.8
Duzib150G1089 Durio zibethinus HOM05D003020 ORTHO05D003226 1.1e-27 127.9 240 43.3
Lj9A26T13 Lonicera japonica HOM05D003020 ORTHO05D003226 1.1e-27 127.9 264 42.0
Sabra18G0080000 Salix brachista HOM05D003020 ORTHO05D003226 1.1e-27 127.9 217 46.1
Lj9C24T7 Lonicera japonica HOM05D003020 ORTHO05D003226 2.0e-27 127.1 264 42.0
ClCG06G013330 Citrullus lanatus HOM05D003020 ORTHO05D003226 4.4e-27 125.9 249 41.8
MELO3C017464.2 Cucumis melo HOM05D003020 ORTHO05D003226 1.7e-26 124.0 246 41.5
DCAR_014702 Daucus carota HOM05D003020 ORTHO05D003226 2.8e-26 123.2 240 43.3
Manes.14G153300 Manihot esculenta HOM05D003020 ORTHO05D003226 2.8e-26 123.2 238 42.0
Manes.14G153500 Manihot esculenta HOM05D003020 ORTHO05D003226 3.7e-26 122.9 241 43.2
Migut.K00242 Erythranthe guttata HOM05D003020 ORTHO05D003226 6.3e-26 122.1 274 37.2
Lsat_1_v5_gn_5_84881 Lactuca sativa HOM05D003020 ORTHO05D003226 6.3e-26 122.1 240 40.0
Psat0s2889g0080 Pisum sativum HOM05D003020 ORTHO05D003226 6.3e-26 122.1 246 39.4
Lj4g0004544 Lotus japonicus HOM05D003020 ORTHO05D003226 8.2e-26 121.7 246 40.2
MD16G1257900 Malus domestica HOM05D003020 ORTHO05D003226 8.2e-26 121.7 238 39.9
QL02p097728 Quercus lobata HOM05D003020 ORTHO05D003226 8.2e-26 121.7 206 45.6
TAR383G0645 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.4e-25 120.9 236 37.7
Atru.chr7.633 Acer truncatum HOM05D003020 ORTHO05D003226 2.4e-25 120.2 243 38.7
Glyma.17G063300 Glycine max HOM05D003020 ORTHO05D003226 3.1e-25 119.8 246 41.1
CsaV3_1G031590 Cucumis sativus L. HOM05D003020 ORTHO05D003226 4.1e-25 119.4 245 41.6
Thhalv10026023m.g Eutrema salsugineum HOM05D003020 ORTHO05D003226 4.1e-25 119.4 233 37.3
Glyma.20G083700 Glycine max HOM05D003020 ORTHO05D003226 4.1e-25 119.4 242 41.7
Nn2g12774 Nelumbo nucifera HOM05D003020 ORTHO05D003226 5.3e-25 119.0 234 39.7
Lalb_Chr12g0199391 Lupinus albus HOM05D003020 ORTHO05D003226 7.0e-25 118.6 239 37.7
Sed0024933 Sechium edule HOM05D003020 ORTHO05D003226 9.1e-25 118.2 230 40.9
Rhsim01G0004800 Rhododendron simsii HOM05D003020 ORTHO05D003226 1.6e-24 117.5 245 37.6
TAR383G0860 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.6e-24 117.5 234 37.6
Lsat_1_v5_gn_7_54521 Lactuca sativa HOM05D003020 ORTHO05D003226 2.0e-24 117.1 239 39.3
PGR102G0964 Punica granatum HOM05D003020 ORTHO05D003226 2.0e-24 117.1 266 38.3
ECA240G3460 Erigeron canadensis HOM05D003020 ORTHO05D003226 2.6e-24 116.7 239 41.0
TPR.G5404 Trifolium pratense HOM05D003020 ORTHO05D003226 3.5e-24 116.3 272 36.0
TWI63G1498 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 1.7e-23 114.0 207 41.1
TAR383G0698 Trochodendron aralioides HOM05D003020 ORTHO05D003226 2.2e-23 113.6 235 36.6
Gorai.004G031500 Gossypium raimondii HOM05D003020 ORTHO05D003226 5.0e-23 112.5 237 39.7
Gohir.A08G023400 Gossypium hirsutum HOM05D003020 ORTHO05D003226 1.1e-22 111.3 237 38.0
Manes.14G153400 Manihot esculenta HOM05D003020 ORTHO05D003226 3.2e-22 109.8 241 40.2
TAR383G0288 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.2e-22 109.8 230 37.8
Ciclev10010819m.g Citrus clementina HOM05D003020 ORTHO05D003226 5.5e-22 109.0 256 39.5
Phvul.003G146000 Phaseolus vulgaris HOM05D003020 ORTHO05D003226 7.2e-22 108.6 239 39.7
TAR626G0085 Trochodendron aralioides HOM05D003020 ORTHO05D003226 7.2e-22 108.6 263 35.0
VMungo1215G0012 Vigna mungo HOM05D003020 ORTHO05D003226 7.2e-22 108.6 241 39.4
Aa31LG2G20290 Aethionema arabicum HOM05D003020 ORTHO05D003226 9.4e-22 108.2 225 37.8
Aqoxy7G03070 Aquilegia oxysepala HOM05D003020 ORTHO05D003226 9.4e-22 108.2 237 38.0
Gohir.D08G033900 Gossypium hirsutum HOM05D003020 ORTHO05D003226 2.1e-21 107.1 237 39.2
THA.LOC104803497 Tarenaya hassleriana HOM05D003020 ORTHO05D003226 8.0e-21 105.1 249 36.9
AL7G21920 Arabidopsis lyrata HOM05D003020 ORTHO05D003226 1.0e-20 104.8 229 32.8
THA.LOC104819978 Tarenaya hassleriana HOM05D003020 ORTHO05D003226 1.4e-20 104.4 247 36.4
Carub.0007s1038 Capsella rubella HOM05D003020 ORTHO05D003226 2.3e-20 103.6 237 34.6
HanXRQChr09g0244991 Helianthus annuus HOM05D003020 ORTHO05D003226 4.0e-20 102.8 274 34.7
ECA234G3857 Erigeron canadensis HOM05D003020 ORTHO05D003226 1.1e-19 101.3 247 34.4
Sp7g28110 Schrenkiella parvula HOM05D003020 ORTHO05D003226 2.0e-19 100.5 233 35.2
Eucgr.C00156 Eucalyptus grandis HOM05D003020 ORTHO05D003226 2.6e-19 100.1 239 37.7
Sabra06G0129900 Salix brachista HOM05D003020 ORTHO05D003226 2.6e-19 100.1 194 44.8
TAR626G1849 Trochodendron aralioides HOM05D003020 ORTHO05D003226 2.6e-19 100.1 257 33.1
BcaNung03008 Brassica carinata HOM05D003020 ORTHO05D003226 3.3e-19 99.8 231 33.3
AT4G30230 Arabidopsis thaliana HOM05D003020 ORTHO05D003226 7.5e-19 98.6 229 33.2
Lalb_Chr07g0180461 Lupinus albus HOM05D003020 ORTHO05D003226 1.3e-18 97.8 220 37.3
Dinv11796 Davidia involucrata HOM05D000336 ORTHO05D002705 1.7e-18 97.4 254 32.7
SGA_v2.0_scaffold17G07929 Striga asiatica HOM05D003020 ORTHO05D003226 3.7e-18 96.3 232 37.9
A01p07910 Brassica napus HOM05D003020 ORTHO05D003226 6.3e-18 95.5 235 34.0
BraA01t00737Z Brassica rapa HOM05D003020 ORTHO05D003226 6.3e-18 95.5 235 34.0
BcaC09g51805 Brassica carinata HOM05D003020 ORTHO05D003226 7.0e-17 92.0 233 32.6
C01p08830 Brassica napus HOM05D003020 ORTHO05D003226 7.0e-17 92.0 233 32.6
BolC1t00873H Brassica oleracea HOM05D003020 ORTHO05D003226 7.0e-17 92.0 233 32.6
Gorai.004G099800 Gossypium raimondii HOM05D003020 ORTHO05D003226 3.5e-16 89.7 150 44.7
TWI34G0269 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 4.5e-16 89.4 238 35.3
Eucgr.C02308 Eucalyptus grandis HOM05D003020 ORTHO05D003226 5.9e-16 89.0 241 35.7
A03p59690 Brassica napus HOM05D003020 ORTHO05D003226 1.1e-14 84.7 238 31.5
C07p57710 Brassica napus HOM05D003020 ORTHO05D003226 1.5e-14 84.3 231 30.7
BolC7t46232H Brassica oleracea HOM05D003020 ORTHO05D003226 1.5e-14 84.3 231 30.7
Ciclev10010534m.g Citrus clementina HOM05D003020 ORTHO05D003226 1.9e-14 84.0 241 33.6
CARHR238140 Cardamine hirsuta HOM05D003020 ORTHO05D003226 2.5e-14 83.6 231 34.2
BraA03t15021Z Brassica rapa HOM05D003020 ORTHO05D003226 4.2e-14 82.8 240 32.1
PSO170G3450 Papaver somniferum HOM05D003020 ORTHO05D003226 9.4e-14 81.6 251 31.9
QL08p056680 Quercus lobata HOM05D003020 ORTHO05D003226 3.6e-13 79.7 280 28.9
Sabra08G0029900 Salix brachista HOM05D003020 ORTHO05D003226 8.0e-13 78.6 232 33.6
Sabra10G0168900 Salix brachista HOM05D003020 ORTHO05D003226 1.0e-12 78.2 230 34.8
Hma1.2p1_0453F.1_g156030 Hydrangea macrophylla HOM05D003020 ORTHO05D003226 2.0e-11 73.9 241 29.5
Manes.07G102900 Manihot esculenta HOM05D003020 ORTHO05D003226 2.0e-11 73.9 256 32.0
MBI16_g41356_MAGBIO Magnolia biondii HOM05D003020 ORTHO05D003226 2.6e-11 73.6 218 31.7
FAN10G0626 Fragaria x ananassa HOM05D003020 ORTHO05D003226 3.4e-11 73.2 251 32.3
FvH4_7g20070 Fragaria vesca HOM05D003020 ORTHO05D003226 7.5e-11 72.0 251 31.9
CiPaw.01G275700 Carya illinoinensis HOM05D003020 ORTHO05D003226 1.3e-10 71.2 216 27.8
FAN06G0496 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.3e-10 71.2 251 31.9
MBI16_g42581_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D003226 1.7e-10 70.9 218 31.2
Prupe.2G217400 Prunus persica HOM05D003020 ORTHO05D003226 1.7e-10 70.9 240 30.4
Dinv31354 Davidia involucrata HOM05D003020 ORTHO05D003226 2.2e-10 70.5 226 32.7
ClCG09G020480 Citrullus lanatus HOM05D003020 ORTHO05D003226 2.8e-10 70.1 216 32.9
AUR62021300 Chenopodium quinoa HOM05D003020 ORTHO05D003226 3.7e-10 69.7 181 33.1
DCAR_031845 Daucus carota HOM05D003020 ORTHO05D003226 3.7e-10 69.7 150 39.3
FAN03G1700 Fragaria x ananassa HOM05D003020 ORTHO05D003226 8.3e-10 68.6 251 31.5
AUR62033218 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.1e-09 68.2 181 35.9
CiPaw.02G176000 Carya illinoinensis HOM05D003020 ORTHO05D003226 1.4e-09 67.8 217 30.0
Ca_10586_v3 Cicer arietinum L. HOM05D003020 ORTHO05D003226 1.4e-09 67.8 275 28.4
Manes.10G043600 Manihot esculenta HOM05D003020 ORTHO05D003226 1.8e-09 67.4 256 28.5
DCAR_019362 Daucus carota HOM05D003020 ORTHO05D003226 2.4e-09 67.0 174 36.8
Eucgr.J01120 Eucalyptus grandis HOM05D003020 ORTHO05D003226 3.1e-09 66.6 258 32.9
Potri.010G218300 Populus trichocarpa HOM05D003020 ORTHO05D003226 4.1e-09 66.2 227 33.0
FvH4_7g20060 Fragaria vesca HOM05D003020 ORTHO05D003226 7.0e-09 65.5 232 28.4
CiPaw.07G071600 Carya illinoinensis HOM05D003020 ORTHO05D003226 9.1e-09 65.1 234 29.5
FAN06G2932 Fragaria x ananassa HOM05D003020 ORTHO05D003226 9.1e-09 65.1 232 28.4
MBI14_g17368_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D000358 1.2e-08 64.7 236 27.5
Lalb_Chr03g0036011 Lupinus albus HOM05D003020 ORTHO05D003226 1.6e-08 64.3 264 26.1
Sabra16G0321600 Salix brachista HOM05D003020 ORTHO05D003226 2.0e-08 63.9 189 33.9
Sabra16G0323200 Salix brachista HOM05D003020 ORTHO05D003226 2.7e-08 63.5 189 33.9
VMungo0720G0200 Vigna mungo HOM05D003020 ORTHO05D003226 2.7e-08 63.5 202 31.7
Potri.008G043300 Populus trichocarpa HOM05D003020 ORTHO05D003226 4.5e-08 62.8 231 31.6
ATR0580G303 Amborella trichopoda HOM05D003020 ORTHO05D003226 5.9e-08 62.4 226 27.9
Cpa.g.sc53.28 Carica papaya HOM05D003020 ORTHO05D003226 1.0e-07 61.6 218 29.8
RcHm_v2.0_Chr1g0364021 Rosa chinensis HOM05D003020 ORTHO05D003226 1.0e-07 61.6 245 29.4
Hma1.2p1_2080F.1_g313480 Hydrangea macrophylla HOM05D011460 ORTHO05D010383 1.3e-07 61.2 192 34.4
FAN01G0050 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.7e-07 60.8 185 31.9
FAN01G2565 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.7e-07 60.8 185 31.9
Actinidia02961 Actinidia chinensis HOM05D003020 ORTHO05D003226 5.0e-07 59.3 203 29.6
Thecc.10G069600 Theobroma cacao HOM05D010162 ORTHO05D010383 5.0e-07 59.3 241 27.4
Sed0002867 Sechium edule HOM05D003020 ORTHO05D003226 8.5e-07 58.5 237 30.8
Actinidia02960 Actinidia chinensis HOM05D003020 ORTHO05D003226 1.1e-06 58.2 202 31.2
Dinv11798 Davidia involucrata HOM05D003020 ORTHO05D003226 1.1e-06 58.2 239 28.9
Manes.10G043500 Manihot esculenta HOM05D003020 ORTHO05D003226 1.1e-06 58.2 233 31.8
MELO3C025508.2 Cucumis melo HOM05D003020 ORTHO05D003226 1.5e-06 57.8 205 30.2
FAN10G4329 Fragaria x ananassa HOM05D003020 ORTHO05D003226 2.5e-06 57.0 184 29.9
Nitab4.5_0000534g0060 Nicotiana tabacum HOM05D003020 ORTHO05D003226 2.5e-06 57.0 252 27.4
Solyc11g008750.1 Solanum lycopersicum HOM05D011460 ORTHO05D010383 2.5e-06 57.0 167 30.5
Thecc.10G069300 Theobroma cacao HOM05D003020 ORTHO05D003226 3.2e-06 56.6 265 29.1
Haze_16927 Corylus avellana HOM05D003020 ORTHO05D003226 4.2e-06 56.2 252 29.4
Duzib114G0652 Durio zibethinus HOM05D010162 ORTHO05D010383 4.2e-06 56.2 207 32.9
Nitab4.5_0005460g0040 Nicotiana tabacum HOM05D011460 ORTHO05D010383 4.2e-06 56.2 244 26.2
Nitab4.5_0021955g0010 Nicotiana tabacum HOM05D011460 ORTHO05D010383 5.5e-06 55.8 246 26.4
Eucgr.J01114 Eucalyptus grandis HOM05D003020 ORTHO05D003226 7.2e-06 55.5 238 28.2
SalBow4G1965 Salvia bowleyana HOM05D003020 ORTHO05D003226 7.2e-06 55.5 194 30.9
TWI38G1817 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 7.2e-06 55.5 243 28.0
Medtr1g095730 Medicago truncatula HOM05D003020 ORTHO05D003226 9.4e-06 55.1 257 24.5


User provided reference genes

Program Settings