Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu004097.1 Olea europaea HOM05D004671 ORTHO05D005638 7.5e-158 560.5 281 100.0
MSTRG.27109 Avicennia marina HOM05D004671 ORTHO05D005638 7.4e-89 331.3 220 75.5
Dinv24388 Davidia involucrata HOM05D004671 ORTHO05D005638 4.1e-87 325.5 220 73.2
Peaxi162Scf00848g00012 Petunia axillaris HOM05D004671 ORTHO05D005638 3.8e-85 318.9 216 73.6
Nitab4.5_0001951g0070 Nicotiana tabacum HOM05D004671 ORTHO05D005638 1.6e-83 313.5 219 73.1
Solyc06g036000.4 Solanum lycopersicum HOM05D004671 ORTHO05D005638 2.7e-83 312.8 216 72.7
Sopen06g011780 Solanum pennellii HOM05D004671 ORTHO05D005638 6.1e-83 311.6 216 72.7
Cc02_g02840 Coffea canephora HOM05D004671 ORTHO05D005638 5.2e-82 308.5 217 73.7
CAN.G208.79 Capsicum annuum HOM05D004671 ORTHO05D005638 6.3e-80 301.6 216 71.3
TAR629G1771 Trochodendron aralioides HOM05D004671 ORTHO05D005638 9.1e-79 297.7 220 68.2
vmacro21316 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 9.4e-76 287.7 216 65.7
vmacro09835 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 2.1e-75 286.6 216 66.2
GSVIVG01028933001 Vitis vinifera HOM05D004671 ORTHO05D005638 1.2e-73 280.8 220 64.5
Eucgr.K00269 Eucalyptus grandis HOM05D004671 ORTHO05D005638 2.6e-73 279.6 216 65.7
Ciclev10004721m.g Citrus clementina HOM05D004671 ORTHO05D005638 5.7e-73 278.5 220 65.5
CiPaw.03G107600 Carya illinoinensis HOM05D004671 ORTHO05D005638 8.3e-72 274.6 219 63.5
Migut.K00770 Erythranthe guttata HOM05D004671 ORTHO05D005638 8.3e-72 274.6 220 64.5
Cpa.g.sc107.62 Carica papaya HOM05D004671 ORTHO05D005638 1.4e-71 273.9 220 63.2
SGA_v2.0_scaffold60G21057 Striga asiatica HOM05D004671 ORTHO05D005638 1.7e-69 266.9 217 59.9
Thecc.03G178300 Theobroma cacao HOM05D004671 ORTHO05D005638 2.3e-69 266.5 220 61.4
SalBow1G2445 Salvia bowleyana HOM05D004671 ORTHO05D005638 1.5e-68 263.8 225 62.2
Haze_13677 Corylus avellana HOM05D004671 ORTHO05D005638 7.2e-68 261.5 219 59.4
Atru.chr1.442 Acer truncatum HOM05D004671 ORTHO05D005638 9.5e-68 261.2 220 59.1
Cfa022980 Carpinus fangiana HOM05D004671 ORTHO05D005638 8.0e-67 258.1 219 58.0
Cfa002753 Carpinus fangiana HOM05D004671 ORTHO05D005638 1.4e-66 257.3 212 61.3
SalBow1G5895 Salvia bowleyana HOM05D004671 ORTHO05D005638 4.0e-66 255.8 235 59.6
Sc13g0008790 Simmondsia chinensis HOM05D004671 ORTHO05D005638 5.2e-66 255.4 216 58.3
ECA233G0868 Erigeron canadensis HOM05D004671 ORTHO05D005638 6.8e-66 255.0 214 59.8
Manes.14G025200 Manihot esculenta HOM05D004671 ORTHO05D005638 1.7e-64 250.4 217 59.0
Duzib205G1877 Durio zibethinus HOM05D004671 ORTHO05D005638 4.9e-64 248.8 244 55.3
EL10Ac3g05622 Beta vulgaris HOM05D004671 ORTHO05D005638 1.4e-63 247.3 221 58.8
DCAR_015049 Daucus carota HOM05D004671 ORTHO05D005638 9.2e-63 244.6 221 57.9
Sed0027520 Sechium edule HOM05D004671 ORTHO05D005638 9.2e-63 244.6 220 57.3
PSO063G7539 Papaver somniferum HOM05D004671 ORTHO05D005638 1.2e-62 244.2 220 56.8
DCAR_010301 Daucus carota HOM05D004671 ORTHO05D005638 1.6e-62 243.8 221 57.9
arahy.Tifrunner.gnm1.ann1.V0I5I8 Arachis hypogaea HOM05D004671 ORTHO05D005638 2.0e-62 243.4 224 55.4
PGR142G1152 Punica granatum HOM05D004671 ORTHO05D005638 2.0e-62 243.4 220 56.4
arahy.Tifrunner.gnm1.ann1.U8RPI8 Arachis hypogaea HOM05D004671 ORTHO05D005638 5.9e-62 241.9 224 54.9
PSO017G5643 Papaver somniferum HOM05D004671 ORTHO05D005638 5.9e-62 241.9 220 56.4
CANSAT21G1295 Cannabis sativa HOM05D004671 ORTHO05D005638 1.0e-61 241.1 216 61.1
CANSAT21G1725 Cannabis sativa HOM05D004671 ORTHO05D005638 1.0e-61 241.1 216 61.1
Aqoxy3G03421 Aquilegia oxysepala HOM05D004671 ORTHO05D005638 1.7e-61 240.4 218 58.7
HanXRQChr15g0497081 Helianthus annuus HOM05D004671 ORTHO05D005638 1.7e-61 240.4 223 55.6
Nn3g16880 Nelumbo nucifera HOM05D004671 ORTHO05D005638 1.7e-61 240.4 199 60.3
ClCG05G008100 Citrullus lanatus HOM05D004671 ORTHO05D005638 6.6e-61 238.4 220 55.9
Glyma.20G159500 Glycine max HOM05D004671 ORTHO05D005638 6.6e-61 238.4 219 56.6
Nitab4.5_0000080g0100 Nicotiana tabacum HOM05D004671 ORTHO05D005638 1.5e-60 237.3 227 60.8
Phvul.007G071300 Phaseolus vulgaris HOM05D004671 ORTHO05D005638 1.5e-60 237.3 218 57.8
HanXRQChr10g0304161 Helianthus annuus HOM05D004671 ORTHO05D005638 1.9e-60 236.9 224 55.8
HanXRQChr06g0163751 Helianthus annuus HOM05D004671 ORTHO05D005638 2.5e-60 236.5 220 55.5
Lalb_Chr06g0161161 Lupinus albus HOM05D004671 ORTHO05D005638 2.5e-60 236.5 218 55.5
Glyma.10G234800 Glycine max HOM05D004671 ORTHO05D005638 4.3e-60 235.7 223 56.1
VMungo0720G2100 Vigna mungo HOM05D004671 ORTHO05D005638 9.5e-60 234.6 218 57.8
GSVIVG01017918001 Vitis vinifera HOM05D004671 ORTHO05D005638 1.2e-59 234.2 220 56.4
Lsat_1_v5_gn_8_8441 Lactuca sativa HOM05D004671 ORTHO05D005638 2.8e-59 233.0 215 59.1
CsaV3_3G017180 Cucumis sativus L. HOM05D004671 ORTHO05D005638 3.6e-59 232.6 220 54.5
Gorai.006G048800 Gossypium raimondii HOM05D004671 ORTHO05D005638 1.4e-58 230.7 220 55.5
TWI14G0685 Tripterygium wilfordii HOM05D004671 ORTHO05D005638 1.4e-58 230.7 221 55.7
Gohir.A09G041700 Gossypium hirsutum HOM05D004671 ORTHO05D005638 1.8e-58 230.3 220 55.5
Gohir.D09G042500 Gossypium hirsutum HOM05D004671 ORTHO05D005638 2.3e-58 229.9 220 55.0
COL.COLO4_14329 Corchorus olitorius HOM05D004671 ORTHO05D005638 1.2e-57 227.6 220 54.1
Sc13g0008760 Simmondsia chinensis HOM05D004671 ORTHO05D005638 1.5e-57 227.3 216 53.2
SHI26612 Sapria himalayana HOM05D004671 ORTHO05D005638 2.0e-57 226.9 221 55.2
Aa31LG4G17500 Aethionema arabicum HOM05D004671 ORTHO05D005638 2.2e-56 223.4 221 55.7
MD01G1202100 Malus domestica HOM05D004671 ORTHO05D005638 2.2e-56 223.4 220 51.8
unitig_37.g12531 Utricularia gibba HOM05D004671 ORTHO05D005638 4.9e-56 222.2 228 56.1
AUR62015967 Chenopodium quinoa HOM05D004671 ORTHO05D005638 6.4e-56 221.9 215 54.0
Rhsim09G0198100 Rhododendron simsii HOM05D004671 ORTHO05D005638 1.1e-55 221.1 188 59.6
MD07G1271200 Malus domestica HOM05D004671 ORTHO05D005638 1.4e-55 220.7 220 51.4
Ca_10754_v3 Cicer arietinum L. HOM05D004671 ORTHO05D005638 3.2e-55 219.5 221 52.5
QL09p013914 Quercus lobata HOM05D004671 ORTHO05D005638 7.0e-55 218.4 175 64.6
Prupe.2G295500 Prunus persica HOM05D004671 ORTHO05D005638 9.2e-55 218.0 225 51.1
Psat6g198360 Pisum sativum HOM05D004671 ORTHO05D005638 2.7e-54 216.5 220 53.2
Lsat_1_v5_gn_3_14041 Lactuca sativa HOM05D004671 ORTHO05D005638 3.5e-54 216.1 213 54.5
AL6G42740 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 6.0e-54 215.3 221 50.7
CDE04G3622 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 7.8e-54 214.9 216 53.2
FAN06G5094 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.0e-53 214.5 230 51.7
AUR62021173 Chenopodium quinoa HOM05D004671 ORTHO05D005638 1.3e-53 214.2 215 54.4
FAN06G3892 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.7e-53 213.8 230 51.7
AT3G49000 Arabidopsis thaliana HOM05D004671 ORTHO05D005638 3.0e-53 213.0 222 50.5
FvH4_7g29570 Fragaria vesca HOM05D004671 ORTHO05D005638 3.0e-53 213.0 230 51.7
Haze_25041 Corylus avellana HOM05D004671 ORTHO05D005638 3.9e-53 212.6 168 64.3
AL5G28510 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 5.0e-53 212.2 221 50.7
Hund04757 Selenicereus undatus HOM05D004671 ORTHO05D005638 2.5e-52 209.9 172 63.4
FAN10G4176 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.2e-51 207.6 230 50.4
Potri.015G144900 Populus trichocarpa HOM05D004671 ORTHO05D005638 2.1e-51 206.8 217 53.0
FAN01G2609 Fragaria x ananassa HOM05D004671 ORTHO05D005638 2.8e-51 206.5 230 50.9
FAN10G3685 Fragaria x ananassa HOM05D004671 ORTHO05D005638 4.7e-51 205.7 230 50.0
BcaC01g02382 Brassica carinata HOM05D004671 ORTHO05D005638 1.4e-50 204.1 221 50.7
BolC3t18845H Brassica oleracea HOM05D004671 ORTHO05D005638 1.4e-50 204.1 221 50.7
C03p65870 Brassica napus HOM05D004671 ORTHO05D005638 1.8e-50 203.8 221 50.7
FAN03G0738 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.8e-50 203.8 232 49.1
THA.LOC104818634 Tarenaya hassleriana HOM05D004671 ORTHO05D005638 1.8e-50 203.8 221 50.2
TPR.G27007 Trifolium pratense HOM05D004671 ORTHO05D005638 1.8e-50 203.8 223 49.3
A06p28000 Brassica napus HOM05D004671 ORTHO05D005638 2.3e-50 203.4 221 50.7
BraA06t25741Z Brassica rapa HOM05D004671 ORTHO05D005638 5.2e-50 202.2 221 50.2
arahy.Tifrunner.gnm1.ann1.R5FQEP Arachis hypogaea HOM05D004671 ORTHO05D005638 8.9e-50 201.4 223 48.4
Sp5g13050 Schrenkiella parvula HOM05D004671 ORTHO05D005638 2.0e-49 200.3 221 49.3
Sabra15G0154400 Salix brachista HOM05D004671 ORTHO05D005638 2.6e-49 199.9 242 49.6
RcHm_v2.0_Chr1g0377571 Rosa chinensis HOM05D004671 ORTHO05D005638 4.4e-49 199.1 238 48.7
Ah.13g068640 Amaranthus hybridus HOM05D004671 ORTHO05D005638 7.5e-49 198.4 215 48.4
Lj5g0019412 Lotus japonicus HOM05D004671 ORTHO05D005638 9.8e-49 198.0 220 48.6
BcaB02g09572 Brassica carinata HOM05D004671 ORTHO05D005638 1.7e-48 197.2 222 49.5
Thhalv10010290m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 2.2e-48 196.8 221 48.4
Medtr1g101100 Medicago truncatula HOM05D004671 ORTHO05D005638 2.4e-47 193.4 221 47.1
HPP92_020192 Vanilla planifolia HOM05D004671 ORTHO05D005638 7.0e-47 191.8 211 48.8
Thhalv10003189m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 1.0e-45 188.0 221 47.1
Migut.K01220 Erythranthe guttata HOM05D004671 ORTHO05D005638 3.0e-45 186.4 142 65.5
Carub.0005s1517 Capsella rubella HOM05D004671 ORTHO05D005638 1.2e-43 181.0 226 46.9
CARHR157820 Cardamine hirsuta HOM05D004671 ORTHO05D005638 1.2e-43 181.0 222 44.6
RcHm_v2.0_Chr6g0258831 Rosa chinensis HOM05D004671 ORTHO05D005638 1.6e-43 180.6 206 51.5
MELO3C031814.2 Cucumis melo HOM05D004671 ORTHO05D005638 4.0e-42 176.0 175 51.4
MD07G1271300 Malus domestica HOM05D004671 ORTHO05D005638 2.6e-41 173.3 182 50.5
Ah.13g076510 Amaranthus hybridus HOM05D004671 ORTHO05D007692 5.4e-39 165.6 173 49.7
Actinidia03123 Actinidia chinensis HOM05D004671 ORTHO05D005638 2.7e-38 163.3 132 65.2
arahy.Tifrunner.gnm1.ann1.4LKL39 Arachis hypogaea HOM05D004671 ORTHO05D005638 1.7e-37 160.6 180 44.4
BolC8t50021H Brassica oleracea HOM05D004671 ORTHO05D005638 2.3e-37 160.2 154 51.3
ATR0737G144 Amborella trichopoda HOM05D004671 ORTHO05D005638 5.1e-37 159.1 220 42.3
C08p23970 Brassica napus HOM05D004671 ORTHO05D005638 5.1e-37 159.1 154 51.9
Carub.0004s0531 Capsella rubella HOM05D004671 ORTHO05D005638 3.3e-36 156.4 222 42.3
BcaC07g39376 Brassica carinata HOM05D004671 ORTHO05D005638 8.1e-35 151.8 149 50.3
Mapoly0133s0004 Marchantia polymorpha HOM05D004671 ORTHO05D005638 3.8e-32 142.9 245 38.4
AagrBONN_evm.TU.Sc2ySwM_344.423 Anthoceros agrestis HOM05D004671 ORTHO05D005638 1.1e-31 141.4 238 36.6
Sed0007536 Sechium edule HOM05D004671 ORTHO05D005638 6.0e-30 135.6 130 55.4
BcaB01g00761 Brassica carinata HOM05D004671 ORTHO05D005638 5.1e-29 132.5 169 46.2
Zm00001eb160040 Zea mays HOM05D004671 ORTHO05D005638 1.1e-28 131.3 235 35.3
Os01g0679000 Oryza sativa ssp. japonica HOM05D004671 ORTHO05D005638 9.6e-28 128.3 233 35.2
CSS0035516 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 1.2e-27 127.9 93 68.8
Pp3c16_7220 Physcomitrium patens HOM05D004671 ORTHO05D005638 5.8e-25 119.0 239 33.5
Sc13g0008680 Simmondsia chinensis HOM05D004671 ORTHO05D005638 1.9e-23 114.0 151 41.7
SMO143G0293 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 2.6e-17 93.6 182 31.9
Oeu002719.1 Olea europaea HOM05D004671 ORTHO05D005638 6.4e-16 89.0 45 88.9
HanXRQChr06g0163701 Helianthus annuus HOM05D001754 ORTHO05D005638 4.6e-14 82.8 178 29.8
MCO01G383 Micromonas commoda HOM05D004671 ORTHO05D005638 1.3e-13 81.3 177 33.3
SMO276G0042 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 8.1e-11 72.0 134 33.6
CBR_g26425 Chara braunii HOM05D004671 ORTHO05D005638 9.3e-07 58.5 109 30.3


User provided reference genes

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