Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu003971.1 Olea europaea HOM05D007692 ORTHO05D009696 1.3e-55 219.5 116 100.0
Nitab4.5_0000446g0120 Nicotiana tabacum HOM05D007692 ORTHO05D009696 6.7e-28 127.5 100 61.0
Solyc08g061640.1 Solanum lycopersicum HOM05D007692 ORTHO05D009696 2.8e-26 122.1 100 61.0
Sopen08g017100 Solanum pennellii HOM05D007692 ORTHO05D009696 2.8e-26 122.1 100 61.0
PGSC0003DMG400045083 Solanum tuberosum HOM05D007692 ORTHO05D009696 2.8e-26 122.1 100 61.0
Nitab4.5_0008422g0010 Nicotiana tabacum HOM05D007692 ORTHO05D009696 3.7e-26 121.7 100 59.0
Peaxi162Scf00486g00102 Petunia axillaris HOM05D007692 ORTHO05D009696 3.1e-25 118.6 99 59.6
CAN.G567.82 Capsicum annuum HOM05D007692 ORTHO05D009696 4.1e-25 118.2 98 59.2
SalBow4G0926 Salvia bowleyana HOM05D007692 ORTHO05D009696 7.0e-25 117.5 101 58.4
SGA_v2.0_scaffold20G09157 Striga asiatica HOM05D006390 ORTHO05D007899 2.0e-24 115.9 113 57.5
MD15G1049600 Malus domestica HOM05D007692 ORTHO05D009696 1.1e-22 110.2 109 57.8
MD08G1071600 Malus domestica HOM05D007692 ORTHO05D009696 1.5e-22 109.8 109 56.9
DCAR_001232 Daucus carota HOM05D006390 ORTHO05D007899 1.9e-22 109.4 113 55.8
Prupe.1G403900 Prunus persica HOM05D007692 ORTHO05D009696 5.5e-22 107.8 106 54.7
Nn2g12400 Nelumbo nucifera HOM05D007692 ORTHO05D009696 1.2e-21 106.7 99 56.6
Hma1.2p1_0278F.1_g111850 Hydrangea macrophylla HOM05D007692 ORTHO05D009696 1.6e-21 106.3 107 50.5
Haze_18297 Corylus avellana HOM05D007692 ORTHO05D009696 2.7e-21 105.5 109 55.0
Potri.006G220500 Populus trichocarpa HOM05D007692 ORTHO05D009696 6.1e-21 104.4 107 51.4
Sabra06G0170400 Salix brachista HOM05D007692 ORTHO05D009696 1.0e-20 103.6 107 52.3
QL02p017055 Quercus lobata HOM05D007692 ORTHO05D009696 1.8e-20 102.8 108 55.6
RcHm_v2.0_Chr6g0311901 Rosa chinensis HOM05D007692 ORTHO05D009696 2.3e-20 102.4 109 52.3
CANSAT25G1329 Cannabis sativa HOM05D007692 ORTHO05D009696 3.0e-20 102.1 110 51.8
EL10Ac2g03778 Beta vulgaris HOM05D007692 ORTHO05D009696 4.0e-20 101.7 108 55.6
Cpa.g.sc126.21 Carica papaya HOM05D007692 ORTHO05D009696 4.0e-20 101.7 111 46.8
FvH4_2g30960 Fragaria vesca HOM05D007692 ORTHO05D009696 5.2e-20 101.3 108 52.8
QL02p017043 Quercus lobata HOM05D007692 ORTHO05D009696 8.8e-20 100.5 105 56.2
Duzib168G1711 Durio zibethinus HOM05D007692 ORTHO05D009696 2.0e-19 99.4 105 52.4
PGR031G0311 Punica granatum HOM05D007692 ORTHO05D009696 3.4e-19 98.6 95 55.8
Glyma.06G056100 Glycine max HOM05D007692 ORTHO05D009696 4.4e-19 98.2 105 55.2
COL.COLO4_21142 Corchorus olitorius HOM05D007692 ORTHO05D009696 7.5e-19 97.4 105 50.5
TAR624G0897 Trochodendron aralioides HOM05D007692 ORTHO05D009696 7.5e-19 97.4 99 53.5
Manes.16G085800 Manihot esculenta HOM05D007692 ORTHO05D009696 9.7e-19 97.1 104 51.0
CSS0041722 Camellia sinensis var. sinensis HOM05D007692 ORTHO05D009696 1.3e-18 96.7 89 55.1
Thecc.09G063700 Theobroma cacao HOM05D007692 ORTHO05D009696 2.8e-18 95.5 94 53.2
arahy.Tifrunner.gnm1.ann1.0E4SK3 Arachis hypogaea HOM05D007692 ORTHO05D009696 4.8e-18 94.7 114 50.9
PSO541G2080 Papaver somniferum HOM05D007692 ORTHO05D009696 4.8e-18 94.7 97 55.7
Eucgr.C00729 Eucalyptus grandis HOM05D007692 ORTHO05D009696 1.1e-17 93.6 113 50.4
MELO3C016914.2 Cucumis melo HOM05D007692 ORTHO05D009696 1.4e-17 93.2 116 52.6
CsaV3_4G036060 Cucumis sativus L. HOM05D007692 ORTHO05D009696 1.4e-17 93.2 116 52.6
Dinv22937 Davidia involucrata HOM05D007692 ORTHO05D009696 1.4e-17 93.2 99 54.5
CiPaw.15G091700 Carya illinoinensis HOM05D007692 ORTHO05D009696 1.8e-17 92.8 107 47.7
PSO675G1902 Papaver somniferum HOM05D007692 ORTHO05D009696 3.1e-17 92.0 97 55.7
unitig_32.g11527 Utricularia gibba HOM05D007692 ORTHO05D009696 3.1e-17 92.0 102 48.0
Cfa017868 Carpinus fangiana HOM05D007692 ORTHO05D009696 5.3e-17 91.3 103 52.4
HPP92_004156 Vanilla planifolia HOM05D007692 ORTHO05D009696 1.6e-16 89.7 95 48.4
VMungo1309G1304 Vigna mungo HOM05D007692 ORTHO05D009696 1.6e-16 89.7 105 50.5
ClCG05G015760 Citrullus lanatus HOM05D007692 ORTHO05D009696 3.5e-16 88.6 116 50.9
Nn8g39911 Nelumbo nucifera HOM05D007692 ORTHO05D009696 4.5e-16 88.2 102 52.9
VMungo0647G2522 Vigna mungo HOM05D007692 ORTHO05D009696 4.5e-16 88.2 105 51.4
Ciclev10010178m.g Citrus clementina HOM05D007692 ORTHO05D009696 5.9e-16 87.8 105 47.6
Phvul.009G082200 Phaseolus vulgaris HOM05D007692 ORTHO05D009696 5.9e-16 87.8 105 49.5
Gohir.D05G040100 Gossypium hirsutum HOM05D007692 ORTHO05D009696 7.7e-16 87.4 105 49.5
Gorai.009G040500 Gossypium raimondii HOM05D007692 ORTHO05D009696 7.7e-16 87.4 105 49.5
TPR.G3568 Trifolium pratense HOM05D007692 ORTHO05D009696 7.7e-16 87.4 97 53.6
Glyma.17G225900 Glycine max HOM05D007692 ORTHO05D009696 1.3e-15 86.7 105 47.6
Medtr1g015470 Medicago truncatula HOM05D007692 ORTHO05D009696 1.3e-15 86.7 105 47.6
TPR.G38893 Trifolium pratense HOM05D007692 ORTHO05D009696 1.3e-15 86.7 105 48.6
THA.LOC104810956 Tarenaya hassleriana HOM05D007692 ORTHO05D009696 1.7e-15 86.3 101 47.5
Lsat_1_v5_gn_7_58320 Lactuca sativa HOM05D006390 ORTHO05D007899 2.2e-15 85.9 103 49.5
TWI63G1278 Tripterygium wilfordii HOM05D007692 ORTHO05D009696 3.8e-15 85.1 114 46.5
Lj5g0021751 Lotus japonicus HOM05D007692 ORTHO05D009696 5.0e-15 84.7 105 48.6
Gohir.A05G038600 Gossypium hirsutum HOM05D007692 ORTHO05D009696 8.5e-15 84.0 106 50.0
Psat6g022960 Pisum sativum HOM05D007692 ORTHO05D009696 8.5e-15 84.0 105 46.7
MBI13_g42817_MAGBIO Magnolia biondii HOM05D007692 ORTHO05D009696 1.1e-14 83.6 95 52.6
Cc08_g01120 Coffea canephora HOM05D007692 ORTHO05D009696 1.5e-14 83.2 112 42.9
ECA240G2866 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.2e-14 82.0 112 44.6
Aqoxy2G03896 Aquilegia oxysepala HOM05D007692 ORTHO05D009696 5.5e-14 81.3 105 47.6
Ah.11g044290 Amaranthus hybridus HOM05D007692 ORTHO05D009696 1.6e-13 79.7 109 45.0
Sed0007061 Sechium edule HOM05D007692 ORTHO05D009696 1.6e-13 79.7 116 49.1
Zm00001eb005780 Zea mays HOM05D007692 ORTHO05D009696 2.1e-13 79.3 99 45.5
Sc06g0001120 Simmondsia chinensis HOM05D007692 ORTHO05D009696 4.7e-13 78.2 106 42.5
Medtr3g105090 Medicago truncatula HOM05D007692 ORTHO05D009696 4.0e-12 75.1 96 47.9
A10p18810 Brassica napus HOM05D007692 ORTHO05D009696 5.2e-12 74.7 94 45.7
C09p54830 Brassica napus HOM05D007692 ORTHO05D009696 5.2e-12 74.7 94 45.7
BolC9t58343H Brassica oleracea HOM05D007692 ORTHO05D009696 5.2e-12 74.7 94 45.7
BraA10t43961Z Brassica rapa HOM05D007692 ORTHO05D009696 5.2e-12 74.7 94 45.7
CDE04G2134 Ceratophyllum demersum HOM05D007692 ORTHO05D009696 8.8e-12 73.9 102 46.1
CARHR191630 Cardamine hirsuta HOM05D007692 ORTHO05D009696 1.2e-11 73.6 112 41.1
Phvul.001G038600 Phaseolus vulgaris HOM05D007692 ORTHO05D009696 1.2e-11 73.6 90 48.9
ATR0598G206 Amborella trichopoda HOM05D007692 ORTHO05D009696 1.5e-11 73.2 97 49.5
BcaB08g36470 Brassica carinata HOM05D007692 ORTHO05D009696 4.4e-11 71.6 94 43.6
Os03g0176900 Oryza sativa ssp. japonica HOM05D007692 ORTHO05D009696 1.3e-10 70.1 98 41.8
Thhalv10015977m.g Eutrema salsugineum HOM05D007692 ORTHO05D009696 8.3e-10 67.4 94 40.4
HanXRQChr03g0065641 Helianthus annuus HOM05D007692 ORTHO05D009696 1.1e-09 67.0 96 39.6
Lalb_Chr11g0063341 Lupinus albus HOM05D007692 ORTHO05D009696 2.4e-09 65.9 105 39.0
Psat5g030520 Pisum sativum HOM05D007692 ORTHO05D009696 3.1e-09 65.5 77 49.4
Lj1g0020593 Lotus japonicus HOM05D007692 ORTHO05D009696 4.1e-09 65.1 106 41.5
Sp6g23280 Schrenkiella parvula HOM05D007692 ORTHO05D009696 4.1e-09 65.1 94 40.4
Carub.0006s1955 Capsella rubella HOM05D007692 ORTHO05D009696 5.4e-09 64.7 94 39.4
AT5G21910 Arabidopsis thaliana HOM05D007692 ORTHO05D009696 5.9e-08 61.2 113 36.3
Medtr1g015490 Medicago truncatula HOM05D007692 ORTHO05D009696 5.9e-08 61.2 91 44.0
Psat6g004480 Pisum sativum HOM05D007692 ORTHO05D009696 5.9e-08 61.2 69 55.1
Carub.0005s0963 Capsella rubella HOM05D007692 ORTHO05D009696 5.5e-06 54.7 93 35.5


User provided reference genes

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