Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu003961.1 Olea europaea HOM05D004560 ORTHO05D005540 1.8e-61 239.2 129 100.0
Oeu039071.1 Olea europaea HOM05D004560 ORTHO05D005540 3.6e-46 188.3 128 80.5
Nitab4.5_0002016g0010 Nicotiana tabacum HOM05D004560 ORTHO05D005540 2.3e-24 115.9 124 54.8
Nitab4.5_0001034g0140 Nicotiana tabacum HOM05D004560 ORTHO05D005540 2.5e-23 112.5 124 54.0
CAN.G836.79 Capsicum annuum HOM05D004560 ORTHO05D005540 3.0e-21 105.5 119 52.9
Peaxi162Scf00450g00514 Petunia axillaris HOM05D004560 ORTHO05D005540 6.8e-21 104.4 124 51.6
Ciclev10024681m.g Citrus clementina HOM05D004560 ORTHO05D005540 2.0e-20 102.8 125 51.2
Solyc02g090760.4 Solanum lycopersicum HOM05D004560 ORTHO05D005540 2.2e-19 99.4 125 51.2
Dinv39857 Davidia involucrata HOM05D004560 ORTHO05D005540 6.4e-19 97.8 130 49.2
Sopen02g035390 Solanum pennellii HOM05D004560 ORTHO05D005540 8.3e-19 97.4 125 49.6
Potri.005G137700 Populus trichocarpa HOM05D004560 ORTHO05D005540 1.1e-18 97.1 120 50.0
PGSC0003DMG400004537 Solanum tuberosum HOM05D004560 ORTHO05D005540 1.1e-18 97.1 117 53.0
CSS0026663 Camellia sinensis var. sinensis HOM05D004560 ORTHO05D005540 4.1e-18 95.1 127 48.8
Actinidia16495 Actinidia chinensis HOM05D004560 ORTHO05D005540 3.5e-17 92.0 122 47.5
Cc07_g19160 Coffea canephora HOM05D004560 ORTHO05D005540 1.0e-16 90.5 104 51.0
Sabra05G0109900 Salix brachista HOM05D004560 ORTHO05D005540 1.0e-16 90.5 120 47.5
Manes.12G101400 Manihot esculenta HOM05D004560 ORTHO05D005540 5.0e-16 88.2 131 45.8
Thecc.01G055000 Theobroma cacao HOM05D004560 ORTHO05D005540 1.1e-15 87.0 111 50.5
Rhsim08G0100900 Rhododendron simsii HOM05D004560 ORTHO05D005540 7.3e-15 84.3 117 50.4
CANSAT01G1534 Cannabis sativa HOM05D004560 ORTHO05D005540 9.5e-15 84.0 123 43.1
Actinidia03789 Actinidia chinensis HOM05D004560 ORTHO05D005540 1.6e-14 83.2 127 44.1
CiPaw.02G008700 Carya illinoinensis HOM05D004560 ORTHO05D005540 2.8e-14 82.4 127 43.3
vmacro17949 Vaccinium macrocarpon HOM05D004560 ORTHO05D005540 4.7e-14 81.6 129 46.5
MSTRG.23750 Avicennia marina HOM05D004560 ORTHO05D005540 1.1e-13 80.5 117 49.6
Cpa.g.sc55.156 Carica papaya HOM05D004560 ORTHO05D005540 1.1e-13 80.5 128 44.5
Gorai.008G075400 Gossypium raimondii HOM05D004560 ORTHO05D005540 1.1e-13 80.5 109 48.6
Cfa004012 Carpinus fangiana HOM05D004560 ORTHO05D005540 1.8e-13 79.7 129 46.5
Duzib147G0064 Durio zibethinus HOM05D004560 ORTHO05D005540 2.3e-13 79.3 113 48.7
Duzib187G0053 Durio zibethinus HOM05D004560 ORTHO05D005540 4.0e-13 78.6 108 46.3
Lj4g0000036 Lotus japonicus HOM05D004560 ORTHO05D005540 4.0e-13 78.6 121 45.5
QL06p041719 Quercus lobata HOM05D004560 ORTHO05D005540 4.0e-13 78.6 124 46.0
TPR.G10251 Trifolium pratense HOM05D004560 ORTHO05D005540 4.0e-13 78.6 129 43.4
Gohir.D12G068900 Gossypium hirsutum HOM05D004560 ORTHO05D005540 5.2e-13 78.2 109 47.7
RcHm_v2.0_Chr2g0105371 Rosa chinensis HOM05D004560 ORTHO05D005540 5.2e-13 78.2 127 44.1
GSVIVG01022139001 Vitis vinifera HOM05D004560 ORTHO05D005540 6.8e-13 77.8 127 47.2
FAN04G2449 Fragaria x ananassa HOM05D004560 ORTHO05D005540 8.9e-13 77.4 127 46.5
Manes.12G101200 Manihot esculenta HOM05D004560 ORTHO05D005540 1.2e-12 77.0 142 43.0
FAN08G1993 Fragaria x ananassa HOM05D004560 ORTHO05D005540 2.0e-12 76.3 127 46.5
TAR376G0591 Trochodendron aralioides HOM05D004560 ORTHO05D005540 3.4e-12 75.5 125 43.2
VMungo0251G0843 Vigna mungo HOM05D004560 ORTHO05D005540 7.5e-12 74.3 121 43.0
MD15G1283100 Malus domestica HOM05D004560 ORTHO05D005540 9.8e-12 73.9 126 42.9
FvH4_5g28170 Fragaria vesca HOM05D004560 ORTHO05D005540 1.3e-11 73.6 122 45.9
Gohir.A12G072000 Gossypium hirsutum HOM05D004560 ORTHO05D005540 1.3e-11 73.6 109 46.8
TWI09G1111 Tripterygium wilfordii HOM05D004560 ORTHO05D005540 1.3e-11 73.6 129 44.2
unitig_736.g22380 Utricularia gibba HOM05D004560 ORTHO05D005540 1.3e-11 73.6 115 48.7
Lalb_Chr09g0323141 Lupinus albus HOM05D004560 ORTHO05D005540 2.9e-11 72.4 104 48.1
MD02G1171200 Malus domestica HOM05D004560 ORTHO05D005540 2.9e-11 72.4 127 41.7
Migut.N01430 Erythranthe guttata HOM05D004560 ORTHO05D005540 3.7e-11 72.0 124 42.7
Lj7A70T81 Lonicera japonica HOM05D004560 ORTHO05D005540 3.7e-11 72.0 129 45.0
TWI73G0239 Tripterygium wilfordii HOM05D004560 ORTHO05D005540 3.7e-11 72.0 124 46.0
Duzib264G0542 Durio zibethinus HOM05D004560 ORTHO05D005540 4.9e-11 71.6 128 42.2
Lalb_Chr09g0323121 Lupinus albus HOM05D004560 ORTHO05D005540 6.4e-11 71.2 85 52.9
Glyma.05G096000 Glycine max HOM05D004560 ORTHO05D005540 8.3e-11 70.9 128 46.1
Sed0014897 Sechium edule HOM05D004560 ORTHO05D005540 8.3e-11 70.9 120 40.8
Potri.007G043300 Populus trichocarpa HOM05D004560 ORTHO05D005540 1.1e-10 70.5 124 40.3
COL.COLO4_11405 Corchorus olitorius HOM05D004560 ORTHO05D005540 2.4e-10 69.3 117 45.3
Glyma.17G175000 Glycine max HOM05D004560 ORTHO05D005540 2.4e-10 69.3 75 54.7
Lalb_Chr16g0378501 Lupinus albus HOM05D004560 ORTHO05D005540 3.2e-10 68.9 122 44.3
Gohir.D12G068700 Gossypium hirsutum HOM05D004560 ORTHO05D005540 4.1e-10 68.6 131 44.3
Gorai.008G075200 Gossypium raimondii HOM05D004560 ORTHO05D005540 4.1e-10 68.6 131 44.3
ClCG01G016790 Citrullus lanatus HOM05D004560 ORTHO05D005540 9.2e-10 67.4 122 38.5
Nn1g04868 Nelumbo nucifera HOM05D004560 ORTHO05D005540 9.2e-10 67.4 127 37.8
Gohir.A12G070800 Gossypium hirsutum HOM05D004560 ORTHO05D005540 2.0e-09 66.2 131 43.5
Phvul.003G244225 Phaseolus vulgaris HOM05D004560 ORTHO05D005540 2.0e-09 66.2 123 45.5
Sed0025145 Sechium edule HOM05D004560 ORTHO05D005540 2.7e-09 65.9 120 38.3
TAR628G0564 Trochodendron aralioides HOM05D004560 ORTHO05D005540 3.5e-09 65.5 126 38.1
Sabra07G0038200 Salix brachista HOM05D004560 ORTHO05D005540 7.8e-09 64.3 122 38.5
ECA238G3505 Erigeron canadensis HOM05D004560 ORTHO05D005540 2.3e-08 62.8 76 51.3
Sc03g0001520 Simmondsia chinensis HOM05D004560 ORTHO05D005540 2.3e-08 62.8 95 45.3
AUR62001937 Chenopodium quinoa HOM05D004560 ORTHO05D005540 3.0e-08 62.4 80 48.8
Prupe.7G134200 Prunus persica HOM05D004560 ORTHO05D005540 3.0e-08 62.4 125 38.4
arahy.Tifrunner.gnm1.ann1.TDMJ0N Arachis hypogaea HOM05D004560 ORTHO05D005540 8.6e-08 60.8 99 41.4
CsaV3_6G043220 Cucumis sativus L. HOM05D004560 ORTHO05D005540 8.6e-08 60.8 123 40.7
unitig_899.g14938 Utricularia gibba HOM05D004560 ORTHO05D005540 8.6e-08 60.8 123 39.8
Psat4g089080 Pisum sativum HOM05D004560 ORTHO05D005540 1.1e-07 60.5 123 39.0
arahy.Tifrunner.gnm1.ann1.IC24VR Arachis hypogaea HOM05D004560 ORTHO05D005540 1.9e-07 59.7 112 39.3
Hund13557 Selenicereus undatus HOM05D004560 ORTHO05D005540 2.5e-07 59.3 121 38.8
FAN04G2556 Fragaria x ananassa HOM05D004560 ORTHO05D005540 3.3e-07 58.9 109 44.0
Eucgr.I00932 Eucalyptus grandis HOM05D004560 ORTHO05D005540 4.3e-07 58.5 119 41.2
FAN18G2522 Fragaria x ananassa HOM05D004560 ORTHO05D005540 5.6e-07 58.2 111 44.1
Aqoxy5G01239 Aquilegia oxysepala HOM05D004560 ORTHO05D005540 6.2e-06 54.7 113 39.8
DCAR_014074 Daucus carota HOM05D004560 ORTHO05D005540 6.2e-06 54.7 123 37.4
AUR62003874 Chenopodium quinoa HOM05D004560 ORTHO05D005540 8.1e-06 54.3 123 35.8


User provided reference genes

Program Settings