Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu003888.1 Olea europaea HOM05D006263 ORTHO05D007549 9.7e-155 550.1 267 100.0
Oeu060008.1 Olea europaea HOM05D006263 ORTHO05D007549 5.0e-151 537.7 267 97.8
Dinv14580 Davidia involucrata HOM05D006263 ORTHO05D007549 6.8e-116 421.0 266 75.9
Solyc10g050850.2 Solanum lycopersicum HOM05D006263 ORTHO05D007549 6.6e-111 404.4 265 72.5
Sopen10g022420 Solanum pennellii HOM05D006263 ORTHO05D007549 1.1e-110 403.7 265 71.7
PGSC0003DMG400008259 Solanum tuberosum HOM05D006263 ORTHO05D007549 3.3e-110 402.1 265 72.5
Haze_19416 Corylus avellana HOM05D006263 ORTHO05D007549 7.3e-110 401.0 265 71.7
Cfa016439 Carpinus fangiana HOM05D006263 ORTHO05D007549 2.1e-109 399.4 265 71.7
SGA_v2.0_scaffold145G36025 Striga asiatica HOM05D006263 ORTHO05D007549 2.1e-109 399.4 265 70.9
Haze_19445 Corylus avellana HOM05D006263 ORTHO05D007549 2.8e-109 399.1 265 71.3
Migut.B01469 Erythranthe guttata HOM05D006263 ORTHO05D007549 3.6e-109 398.7 264 71.2
Nitab4.5_0002825g0060 Nicotiana tabacum HOM05D006263 ORTHO05D007549 4.7e-109 398.3 264 69.3
Potri.019G034400 Populus trichocarpa HOM05D006263 ORTHO05D007549 6.2e-109 397.9 267 70.4
Nitab4.5_0000001g0100 Nicotiana tabacum HOM05D006263 ORTHO05D007549 1.4e-108 396.7 264 68.6
TAR623G0038 Trochodendron aralioides HOM05D006263 ORTHO05D007549 2.3e-108 396.0 268 70.9
CAN.G216.5 Capsicum annuum HOM05D006263 ORTHO05D007549 3.1e-108 395.6 264 69.7
CSS0025413 Camellia sinensis var. sinensis HOM05D006263 ORTHO05D007549 8.9e-108 394.0 262 70.2
Potri.006G233200 Populus trichocarpa HOM05D006263 ORTHO05D007549 1.2e-107 393.7 263 70.3
Rhsim04G0087300 Rhododendron simsii HOM05D006263 ORTHO05D007549 2.6e-107 392.5 266 71.4
GSVIVG01033398001 Vitis vinifera HOM05D006263 ORTHO05D007549 2.6e-107 392.5 263 70.3
MSTRG.20649 Avicennia marina HOM05D006263 ORTHO05D007549 4.4e-107 391.7 264 71.6
Manes.09G141600 Manihot esculenta HOM05D006263 ORTHO05D007549 5.8e-107 391.3 267 70.4
COL.COLO4_13602 Corchorus olitorius HOM05D006263 ORTHO05D007549 7.5e-107 391.0 266 68.8
HanXRQChr01g0024721 Helianthus annuus HOM05D006263 ORTHO05D007549 1.7e-106 389.8 268 67.5
Gorai.007G289300 Gossypium raimondii HOM05D006263 ORTHO05D007549 2.9e-106 389.0 266 66.9
PSO339G1401 Papaver somniferum HOM05D006263 ORTHO05D007549 4.9e-106 388.3 262 69.5
Lj2A357T95 Lonicera japonica HOM05D006263 ORTHO05D007549 8.3e-106 387.5 267 69.7
Thecc.05G294200 Theobroma cacao HOM05D006263 ORTHO05D007549 1.1e-105 387.1 272 68.0
Gohir.A11G259300 Gossypium hirsutum HOM05D006263 ORTHO05D007549 1.4e-105 386.7 266 66.5
TWI34G1357 Tripterygium wilfordii HOM05D006263 ORTHO05D007549 1.4e-105 386.7 269 67.7
Duzib177G1028 Durio zibethinus HOM05D006263 ORTHO05D007549 1.9e-105 386.3 270 68.1
Sabra19G0044500 Salix brachista HOM05D006263 ORTHO05D007549 1.9e-105 386.3 267 68.2
CiPaw.10G000900 Carya illinoinensis HOM05D006263 ORTHO05D007549 3.2e-105 385.6 265 70.6
Cc06_g22910 Coffea canephora HOM05D006263 ORTHO05D007549 3.2e-105 385.6 262 71.0
Gohir.D11G269500 Gossypium hirsutum HOM05D006263 ORTHO05D007549 5.4e-105 384.8 266 66.2
PSO384G1918 Papaver somniferum HOM05D006263 ORTHO05D007549 5.4e-105 384.8 262 69.1
DCAR_013689 Daucus carota HOM05D006263 ORTHO05D007549 1.6e-104 383.3 264 67.8
Lalb_Chr06g0173981 Lupinus albus HOM05D006263 ORTHO05D007549 1.6e-104 383.3 264 67.8
Ciclev10020896m.g Citrus clementina HOM05D006263 ORTHO05D007549 6.0e-104 381.3 267 68.9
Prupe.7G003700 Prunus persica HOM05D006263 ORTHO05D007549 1.3e-103 380.2 262 70.2
Atru.chr2.1379 Acer truncatum HOM05D006263 ORTHO05D007549 1.7e-103 379.8 265 69.8
Lsat_1_v5_gn_1_59641 Lactuca sativa HOM05D006263 ORTHO05D007549 1.7e-103 379.8 267 66.3
Phvul.004G080400 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 1.7e-103 379.8 268 68.3
AT5G18200 Arabidopsis thaliana HOM05D006263 ORTHO05D007549 3.0e-103 379.0 262 65.3
Glyma.16G153300 Glycine max HOM05D006263 ORTHO05D007549 3.0e-103 379.0 267 67.4
Aqoxy1G00489 Aquilegia oxysepala HOM05D006263 ORTHO05D007549 5.0e-103 378.3 270 67.4
VMungo0464G2181 Vigna mungo HOM05D006263 ORTHO05D007549 6.6e-103 377.9 264 68.2
AL6G29400 Arabidopsis lyrata HOM05D006263 ORTHO05D007549 8.6e-103 377.5 262 65.6
QL07p019666 Quercus lobata HOM05D006263 ORTHO05D007549 1.1e-102 377.1 263 67.3
THA.LOC104827270 Tarenaya hassleriana HOM05D006263 ORTHO05D007549 1.1e-102 377.1 263 65.8
Nn7g35844 Nelumbo nucifera HOM05D006263 ORTHO05D007549 2.5e-102 375.9 264 67.4
BraA10t44195Z Brassica rapa HOM05D006263 ORTHO05D007549 3.3e-102 375.6 262 63.7
Sp6g26120 Schrenkiella parvula HOM05D006263 ORTHO05D007549 3.3e-102 375.6 262 65.3
A10p21320 Brassica napus HOM05D006263 ORTHO05D007549 4.3e-102 375.2 262 64.1
unitig_26.g9717 Utricularia gibba HOM05D006263 ORTHO05D007549 5.6e-102 374.8 264 64.4
C09p58780 Brassica napus HOM05D006263 ORTHO05D007549 9.5e-102 374.0 262 63.4
Carub.0006s1648 Capsella rubella HOM05D006263 ORTHO05D007549 9.5e-102 374.0 262 64.5
ClCG05G001960 Citrullus lanatus HOM05D006263 ORTHO05D007549 1.6e-101 373.2 263 65.8
MELO3C006156.2 Cucumis melo HOM05D006263 ORTHO05D007549 1.6e-101 373.2 263 65.4
Ca_04490_v3 Cicer arietinum L. HOM05D006263 ORTHO05D007549 4.7e-101 371.7 265 65.3
BcaB08g36696 Brassica carinata HOM05D006263 ORTHO05D007549 1.1e-100 370.5 259 64.1
BcaC04g18720 Brassica carinata HOM05D006263 ORTHO05D007549 1.1e-100 370.5 262 63.0
CARHR194860 Cardamine hirsuta HOM05D006263 ORTHO05D007549 1.4e-100 370.2 262 63.0
Thhalv10013996m.g Eutrema salsugineum HOM05D006263 ORTHO05D007549 1.8e-100 369.8 262 63.7
Lj6g0008715 Lotus japonicus HOM05D006263 ORTHO05D007549 1.8e-100 369.8 267 64.8
BolC9t58720H Brassica oleracea HOM05D006263 ORTHO05D007549 2.3e-100 369.4 263 63.1
MD12G1003100 Malus domestica HOM05D006263 ORTHO05D007549 3.1e-100 369.0 267 66.7
CANSAT78G2484 Cannabis sativa HOM05D006263 ORTHO05D007549 4.0e-100 368.6 263 66.9
RcHm_v2.0_Chr3g0497171 Rosa chinensis HOM05D006263 ORTHO05D007549 8.9e-100 367.5 266 65.4
PGR042G1093 Punica granatum HOM05D006263 ORTHO05D007549 1.2e-99 367.1 264 66.3
Sabra19G0042300 Salix brachista HOM05D006263 ORTHO05D007549 1.5e-99 366.7 313 58.5
arahy.Tifrunner.gnm1.ann1.NGU2DL Arachis hypogaea HOM05D006263 ORTHO05D007549 2.6e-99 365.9 265 64.9
Eucgr.L01413 Eucalyptus grandis HOM05D006263 ORTHO05D007549 2.6e-99 365.9 263 66.9
Eucgr.K02258 Eucalyptus grandis HOM05D006263 ORTHO05D007549 7.5e-99 364.4 263 66.5
Psat1g096040 Pisum sativum HOM05D006263 ORTHO05D007549 7.5e-99 364.4 265 64.9
ECA285G0004 Erigeron canadensis HOM05D006263 ORTHO05D007549 1.3e-98 363.6 271 63.5
Peaxi162Scf00076g01055 Petunia axillaris HOM05D006263 ORTHO05D007549 1.4e-97 360.1 264 64.8
Medtr6g029470 Medicago truncatula HOM05D006263 ORTHO05D007549 7.1e-97 357.8 262 64.5
Hund06464 Selenicereus undatus HOM05D006263 ORTHO05D007549 6.0e-96 354.8 262 64.1
Ca_04491_v3 Cicer arietinum L. HOM05D006263 ORTHO05D000429 1.7e-95 353.2 263 64.3
FvH4_1g28080 Fragaria vesca HOM05D006263 ORTHO05D007549 4.3e-94 348.6 268 63.4
AUR62027102 Chenopodium quinoa HOM05D006263 ORTHO05D007549 5.6e-94 348.2 263 62.0
CDE02G1162 Ceratophyllum demersum HOM05D006263 ORTHO05D007549 9.5e-94 347.4 265 60.0
FAN19G0970 Fragaria x ananassa HOM05D006263 ORTHO05D007549 9.5e-94 347.4 268 63.1
AUR62012878 Chenopodium quinoa HOM05D006263 ORTHO05D007549 1.2e-93 347.1 262 62.6
FAN23G2537 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.2e-93 347.1 268 62.7
TAR369G0989 Trochodendron aralioides HOM05D006263 ORTHO05D007549 1.6e-93 346.7 266 64.7
HPP92_015639 Vanilla planifolia HOM05D006263 ORTHO05D007549 2.1e-93 346.3 264 60.6
ATR0697G038 Amborella trichopoda HOM05D006263 ORTHO05D007549 2.8e-93 345.9 257 64.6
FAN26G0246 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.1e-92 344.0 268 62.7
Aa31LG11G11400 Aethionema arabicum HOM05D006263 ORTHO05D007549 1.4e-92 343.6 296 56.8
Zm00001eb301000 Zea mays HOM05D006263 ORTHO05D007549 1.2e-91 340.5 264 61.0
FAN28G0550 Fragaria x ananassa HOM05D006263 ORTHO05D007549 3.4e-91 339.0 268 62.7
FAN28G1368 Fragaria x ananassa HOM05D006263 ORTHO05D007549 4.4e-91 338.6 268 61.6
TPR.G34629 Trifolium pratense HOM05D006263 ORTHO05D007549 4.9e-90 335.1 237 63.3
Psat1g096000 Pisum sativum HOM05D006263 ORTHO05D007549 8.4e-90 334.3 264 59.8
Medtr6g029530 Medicago truncatula HOM05D006263 ORTHO05D007549 9.2e-89 330.9 238 63.4
SalBow5G0264 Salvia bowleyana HOM05D006263 ORTHO05D007549 2.7e-88 329.3 262 62.2
Actinidia17306 Actinidia chinensis HOM05D000412 ORTHO05D000429 6.6e-87 324.7 216 75.5
Os07g0171200 Oryza sativa ssp. japonica HOM05D006263 ORTHO05D007549 3.3e-86 322.4 235 63.4
EL10Ac9g22064 Beta vulgaris HOM05D006263 ORTHO05D007549 8.1e-85 317.8 262 58.8
Cpa.g.sc51.112 Carica papaya HOM05D006263 ORTHO05D007549 8.1e-85 317.8 276 59.4
vmacro09144 Vaccinium macrocarpon HOM05D006263 ORTHO05D007549 1.8e-84 316.6 265 59.2
Hma1.2p1_0376F.1_g139140 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 4.9e-82 308.5 226 65.5
Ah.01g007390 Amaranthus hybridus HOM05D006263 ORTHO05D007549 1.6e-80 303.5 355 46.2
Hma1.2p1_0376F.1_g139150 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 2.1e-80 303.1 183 77.6
Sc18g0007080 Simmondsia chinensis HOM05D006263 ORTHO05D007549 2.7e-80 302.8 262 57.6
MBI11_g31289_MAGBIO Magnolia biondii HOM05D006263 ORTHO05D007549 4.9e-74 282.0 268 54.1
SEGI_37923 Sequoiadendron giganteum HOM05D006263 ORTHO05D007549 4.6e-72 275.4 269 49.8
Eucgr.A02096 Eucalyptus grandis HOM05D006263 ORTHO05D007549 2.9e-66 256.1 215 61.4
CsaV3_3G009370 Cucumis sativus L. HOM05D006263 ORTHO05D007549 6.9e-60 235.0 179 61.5
Mapoly0103s0062 Marchantia polymorpha HOM05D006263 ORTHO05D007549 1.2e-59 234.2 277 43.0
Sed0020840 Sechium edule HOM05D006263 ORTHO05D007549 1.7e-58 230.3 179 60.3
Pp3c17_20460 Physcomitrium patens HOM05D006263 ORTHO05D007549 8.2e-53 211.5 268 38.1
SMO367G0539 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 1.4e-49 200.7 262 40.8
RhsimUnG0048700 Rhododendron simsii HOM05D006263 ORTHO05D007549 4.6e-48 195.7 181 57.5
FAN16G0439 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.0e-35 153.7 143 55.2
Pp3c2_1350 Physcomitrium patens HOM05D006263 ORTHO05D007549 6.7e-31 138.7 184 37.0
FAN18G1683 Fragaria x ananassa HOM05D000349 ORTHO05D007549 2.9e-26 123.2 152 47.4
TPR.G18346 Trifolium pratense HOM05D006263 ORTHO05D007549 1.1e-25 121.3 80 66.2
FAN06G4136 Fragaria x ananassa HOM05D000349 ORTHO05D007549 8.8e-23 111.7 133 48.9
FAN24G0044 Fragaria x ananassa HOM05D006263 ORTHO05D007549 9.7e-22 108.2 179 40.2
FAN18G1526 Fragaria x ananassa HOM05D000349 ORTHO05D007549 1.3e-18 97.8 125 48.0
SMO275G0019 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 1.7e-18 97.4 129 37.2
Hma1.2p1_0376F.1_g139120 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 8.5e-18 95.1 90 55.6
FAN03G3217 Fragaria x ananassa HOM05D002676 ORTHO05D003194 1.0e-15 88.2 60 66.7
FAN11G1140 Fragaria x ananassa HOM05D002676 ORTHO05D003194 1.0e-15 88.2 60 66.7
FAN22G0360 Fragaria x ananassa HOM05D002676 ORTHO05D003194 1.0e-15 88.2 60 66.7
FAN22G1437 Fragaria x ananassa HOM05D002676 ORTHO05D007549 8.8e-15 85.1 60 65.0
SMO367G0580 Selaginella moellendorffii HOM05D006263 ORTHO05D378923 5.7e-14 82.4 107 37.4
FAN15G0659 Fragaria x ananassa HOM05D006263 ORTHO05D007549 7.5e-14 82.0 116 45.7
FAN08G1181 Fragaria x ananassa HOM05D003914 ORTHO05D001189 1.2e-11 74.7 53 64.2
FAN27G3525 Fragaria x ananassa HOM05D003914 ORTHO05D001189 1.2e-11 74.7 53 64.2
Phvul.004G082000 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 2.0e-11 73.9 59 59.3
FAN22G0951 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.0e-10 71.6 68 50.0
FAN25G1138 Fragaria x ananassa HOM05D012843 ORTHO05D017973 2.9e-10 70.1 68 50.0
FAN12G3135 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.1e-09 68.2 68 48.5
FAN22G2156 Fragaria x ananassa HOM05D002676 ORTHO05D003194 6.1e-08 62.4 70 45.7
FAN19G1473 Fragaria x ananassa HOM05D000005 ORTHO05D000294 9.8e-06 55.1 60 45.0


User provided reference genes

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