Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu003780.1 Olea europaea HOM05D005881 ORTHO05D007298 3.6e-45 184.5 89 100.0
Oeu010217.3 Olea europaea HOM05D005881 ORTHO05D007298 7.4e-43 176.8 89 94.4
Cfa026039 Carpinus fangiana HOM05D005881 ORTHO05D007298 2.0e-35 152.1 89 82.0
Haze_07862 Corylus avellana HOM05D005881 ORTHO05D007298 2.6e-35 151.8 89 82.0
Hma1.2p1_0052F.1_g029890 Hydrangea macrophylla HOM05D005881 ORTHO05D007298 4.4e-35 151.0 78 89.7
CAN.G855.36 Capsicum annuum HOM05D005881 ORTHO05D007298 1.7e-34 149.1 78 88.5
HanXRQChr17g0543881 Helianthus annuus HOM05D005881 ORTHO05D007298 2.2e-34 148.7 77 88.3
Haze_12831 Corylus avellana HOM05D005881 ORTHO05D007298 2.8e-34 148.3 89 80.9
MBI06_g43454_MAGBIO Magnolia biondii HOM05D005881 ORTHO05D007298 2.8e-34 148.3 82 81.7
Nitab4.5_0001057g0140 Nicotiana tabacum HOM05D005881 ORTHO05D007298 4.8e-34 147.5 77 87.0
Solyc01g103190.3 Solanum lycopersicum HOM05D005881 ORTHO05D007298 6.3e-34 147.1 78 84.6
Sopen01g045620 Solanum pennellii HOM05D005881 ORTHO05D007298 6.3e-34 147.1 78 84.6
vmacro19838 Vaccinium macrocarpon HOM05D005881 ORTHO05D007298 6.3e-34 147.1 82 81.7
Migut.O00861 Erythranthe guttata HOM05D005881 ORTHO05D007298 8.2e-34 146.7 82 82.9
Sc07g0003630 Simmondsia chinensis HOM05D005881 ORTHO05D007298 8.2e-34 146.7 84 79.8
Peaxi162Scf00450g00736 Petunia axillaris HOM05D005881 ORTHO05D007298 1.1e-33 146.4 78 85.9
Sopen01g045600 Solanum pennellii HOM05D005881 ORTHO05D007298 1.1e-33 146.4 78 84.6
Thecc.02G037800 Theobroma cacao HOM05D005881 ORTHO05D007298 1.4e-33 146.0 81 82.7
arahy.Tifrunner.gnm1.ann1.6Q1IVA Arachis hypogaea HOM05D005881 ORTHO05D007298 1.8e-33 145.6 77 83.1
arahy.Tifrunner.gnm1.ann1.GZL8T6 Arachis hypogaea HOM05D005881 ORTHO05D007298 1.8e-33 145.6 77 83.1
ECA246G1780 Erigeron canadensis HOM05D005881 ORTHO05D007298 1.8e-33 145.6 78 87.2
CANSAT54G2245 Cannabis sativa HOM05D005881 ORTHO05D007298 2.4e-33 145.2 82 80.5
Gohir.1Z049413 Gossypium hirsutum HOM05D005881 ORTHO05D007298 3.1e-33 144.8 79 86.1
Gohir.1Z049621 Gossypium hirsutum HOM05D005881 ORTHO05D007298 3.1e-33 144.8 79 86.1
Ciclev10002996m.g Citrus clementina HOM05D005881 ORTHO05D007298 4.1e-33 144.4 82 81.7
Cc02_g34860 Coffea canephora HOM05D005881 ORTHO05D007298 4.1e-33 144.4 89 76.4
Gohir.D10G000200 Gossypium hirsutum HOM05D005881 ORTHO05D007298 4.1e-33 144.4 79 84.8
PSO017G1314 Papaver somniferum HOM05D005881 ORTHO05D007298 4.1e-33 144.4 78 85.9
CiPaw.06G026000 Carya illinoinensis HOM05D005881 ORTHO05D007298 5.3e-33 144.1 87 78.2
AUR62022918 Chenopodium quinoa HOM05D005881 ORTHO05D007298 5.3e-33 144.1 77 84.4
Migut.N00857 Erythranthe guttata HOM05D005881 ORTHO05D007298 5.3e-33 144.1 82 81.7
Nn2g11943 Nelumbo nucifera HOM05D005881 ORTHO05D007298 5.3e-33 144.1 78 83.3
PSO170G3105 Papaver somniferum HOM05D005881 ORTHO05D007298 5.3e-33 144.1 78 85.9
Eucgr.K01416 Eucalyptus grandis HOM05D005881 ORTHO05D007298 7.0e-33 143.7 78 83.3
Lsat_1_v5_gn_9_121521 Lactuca sativa HOM05D005881 ORTHO05D007298 9.1e-33 143.3 77 85.7
PSO407G0212 Papaver somniferum HOM05D005881 ORTHO05D007298 9.1e-33 143.3 77 85.7
Potri.004G227500 Populus trichocarpa HOM05D005881 ORTHO05D007298 9.1e-33 143.3 87 79.3
QL02p102397 Quercus lobata HOM05D005881 ORTHO05D007298 9.1e-33 143.3 88 77.3
CSS0041173 Camellia sinensis var. sinensis HOM05D005881 ORTHO05D007298 1.2e-32 142.9 75 86.7
Gorai.002G000700 Gossypium raimondii HOM05D005881 ORTHO05D007298 1.2e-32 142.9 79 84.8
QL02p103034 Quercus lobata HOM05D005881 ORTHO05D007298 1.2e-32 142.9 88 77.3
Ah.00g001370 Amaranthus hybridus HOM05D005881 ORTHO05D007298 1.6e-32 142.5 77 85.7
arahy.Tifrunner.gnm1.ann1.8HB0N1 Arachis hypogaea HOM05D005881 ORTHO05D007298 1.6e-32 142.5 82 76.8
Duzib052G1237 Durio zibethinus HOM05D005881 ORTHO05D007298 1.6e-32 142.5 81 81.5
Lalb_Chr18g0053871 Lupinus albus HOM05D005881 ORTHO05D007298 1.6e-32 142.5 82 79.3
Aqoxy1G00234 Aquilegia oxysepala HOM05D005881 ORTHO05D007298 2.0e-32 142.1 82 80.5
ClCG10G007340 Citrullus lanatus HOM05D005881 ORTHO05D007298 2.0e-32 142.1 87 74.7
Manes.10G110680 Manihot esculenta HOM05D005881 ORTHO05D007298 2.0e-32 142.1 82 80.5
Prupe.1G582900 Prunus persica HOM05D005881 ORTHO05D007298 2.0e-32 142.1 83 80.7
PGR042G2514 Punica granatum HOM05D005881 ORTHO05D007298 2.0e-32 142.1 79 81.0
Sed0016149 Sechium edule HOM05D005881 ORTHO05D007298 2.0e-32 142.1 77 83.1
TWI79G0203 Tripterygium wilfordii HOM05D005881 ORTHO05D007298 2.6e-32 141.7 82 79.3
Gohir.A01G000500 Gossypium hirsutum HOM05D005881 ORTHO05D007298 3.5e-32 141.4 79 83.5
Lj6g0001713 Lotus japonicus HOM05D005881 ORTHO05D007298 3.5e-32 141.4 82 78.0
Atru.chr6.354 Acer truncatum HOM05D005881 ORTHO05D007298 4.5e-32 141.0 81 80.2
DCAR_001713 Daucus carota HOM05D005881 ORTHO05D007298 4.5e-32 141.0 90 73.3
Manes.07G028000 Manihot esculenta HOM05D005881 ORTHO05D007298 1.0e-31 139.8 78 83.3
MD09G1270200 Malus domestica HOM05D005881 ORTHO05D007298 1.3e-31 139.4 84 77.4
MD17G1268300 Malus domestica HOM05D005881 ORTHO05D007298 1.3e-31 139.4 84 77.4
CDE08G1319 Ceratophyllum demersum HOM05D005881 ORTHO05D007298 1.7e-31 139.0 75 82.7
Glyma.11G208400 Glycine max HOM05D005881 ORTHO05D007298 1.7e-31 139.0 82 76.8
Glyma.18G045400 Glycine max HOM05D005881 ORTHO05D007298 1.7e-31 139.0 82 76.8
SGA_v2.0_scaffold254G45257 Striga asiatica HOM05D005881 ORTHO05D007298 1.7e-31 139.0 89 74.2
TAR623G1668 Trochodendron aralioides HOM05D005881 ORTHO05D007298 1.7e-31 139.0 78 80.8
Nitab4.5_0002546g0080 Nicotiana tabacum HOM05D005881 ORTHO05D007298 2.9e-31 138.3 92 72.8
Carub.0007s2023 Capsella rubella HOM05D005881 ORTHO05D007298 5.0e-31 137.5 75 84.0
Aa31LG6G3200 Aethionema arabicum HOM05D005881 ORTHO05D007298 6.5e-31 137.1 79 79.7
arahy.Tifrunner.gnm1.ann1.VTJ29R Arachis hypogaea HOM05D005881 ORTHO05D007298 6.5e-31 137.1 82 76.8
EL10Ac2g04867 Beta vulgaris HOM05D005881 ORTHO05D007298 6.5e-31 137.1 77 80.5
Os02g0560450 Oryza sativa ssp. japonica HOM05D005881 ORTHO05D007298 1.1e-30 136.3 82 75.6
THA.LOC104812459 Tarenaya hassleriana HOM05D005881 ORTHO05D007298 1.1e-30 136.3 79 77.2
Gohir.1Z049575 Gossypium hirsutum HOM05D005881 ORTHO05D007298 1.9e-30 135.6 79 83.5
Gorai.002G000900 Gossypium raimondii HOM05D005881 ORTHO05D007298 1.9e-30 135.6 79 83.5
RcHm_v2.0_Chr7g0222581 Rosa chinensis HOM05D005881 ORTHO05D007298 1.9e-30 135.6 78 79.5
Medtr3g064240 Medicago truncatula HOM05D005881 ORTHO05D007298 3.2e-30 134.8 82 74.4
AL3G11760 Arabidopsis lyrata HOM05D005881 ORTHO05D007298 5.5e-30 134.0 75 81.3
AT4G21192 Arabidopsis thaliana HOM05D005881 ORTHO05D007298 5.5e-30 134.0 75 81.3
Sp7g19280 Schrenkiella parvula HOM05D005881 ORTHO05D007298 5.5e-30 134.0 77 79.2
TPR.G37331 Trifolium pratense HOM05D005881 ORTHO05D007298 5.5e-30 134.0 81 75.3
GSVIVG01023198001 Vitis vinifera HOM05D005881 ORTHO05D007298 5.5e-30 134.0 78 75.6
THA.LOC104812941 Tarenaya hassleriana HOM05D005881 ORTHO05D007298 7.2e-30 133.7 83 73.5
BcaC06g30655 Brassica carinata HOM05D005881 ORTHO05D007298 9.4e-30 133.3 79 81.0
BcaNung00865 Brassica carinata HOM05D005881 ORTHO05D007298 9.4e-30 133.3 79 81.0
A03p52690 Brassica napus HOM05D005881 ORTHO05D007298 9.4e-30 133.3 79 81.0
C07p51120 Brassica napus HOM05D005881 ORTHO05D007298 9.4e-30 133.3 79 81.0
BolC7t45612H Brassica oleracea HOM05D005881 ORTHO05D007298 9.4e-30 133.3 79 81.0
CARHR227780 Cardamine hirsuta HOM05D005881 ORTHO05D007298 9.4e-30 133.3 75 80.0
Thhalv10026658m.g Eutrema salsugineum HOM05D005881 ORTHO05D007298 9.4e-30 133.3 75 81.3
AL7G32920 Arabidopsis lyrata HOM05D005881 ORTHO05D007298 1.2e-29 132.9 75 80.0
BraA03t14343Z Brassica rapa HOM05D005881 ORTHO05D007298 1.2e-29 132.9 79 81.0
FvH4_5g29590 Fragaria vesca HOM05D005881 ORTHO05D007298 2.1e-29 132.1 77 76.6
C03p83470 Brassica napus HOM05D005881 ORTHO05D007298 3.6e-29 131.3 75 78.7
BcaC01g00708 Brassica carinata HOM05D005881 ORTHO05D007298 4.7e-29 131.0 75 78.7
BolC3t20627H Brassica oleracea HOM05D005881 ORTHO05D007298 4.7e-29 131.0 75 78.7
BraA08t33500Z Brassica rapa HOM05D005881 ORTHO05D007298 4.7e-29 131.0 75 78.7
PGSC0003DMG400024874 Solanum tuberosum HOM05D005881 ORTHO05D007298 3.0e-28 128.3 113 57.5
Gohir.1Z049313 Gossypium hirsutum HOM05D005881 ORTHO05D007298 5.2e-28 127.5 79 78.5
FAN18G0030 Fragaria x ananassa HOM05D005881 ORTHO05D007298 3.7e-26 121.3 94 62.8
Cfa026049 Carpinus fangiana HOM05D005881 ORTHO05D007298 6.3e-26 120.6 78 78.2
Haze_20435 Corylus avellana HOM05D005881 ORTHO05D007298 8.3e-26 120.2 74 82.4
CsaV3_3G006580 Cucumis sativus L. HOM05D005881 ORTHO05D007298 1.1e-25 119.8 66 83.3
Cfa021151 Carpinus fangiana HOM05D005881 ORTHO05D007298 3.1e-25 118.2 74 81.1
Gohir.A01G140426 Gossypium hirsutum HOM05D005881 ORTHO05D007298 5.3e-25 117.5 68 82.4
SGA_v2.0_scaffold131G34400 Striga asiatica HOM05D005881 ORTHO05D007298 9.1e-25 116.7 78 69.2
COL.COLO4_17857 Corchorus olitorius HOM05D005881 ORTHO05D007298 1.2e-24 116.3 70 80.0
MBI06_g45555_MAGBIO Magnolia biondii HOM05D005881 ORTHO05D007298 1.2e-24 116.3 69 78.3
Nitab4.5_0001057g0150 Nicotiana tabacum HOM05D005881 ORTHO05D007298 3.5e-24 114.8 63 85.7
Gohir.1Z049675 Gossypium hirsutum HOM05D005881 ORTHO05D007298 4.5e-24 114.4 61 80.3
Gohir.1Z049721 Gossypium hirsutum HOM05D005881 ORTHO05D007298 1.3e-23 112.8 70 81.4
Gorai.011G000600 Gossypium raimondii HOM05D005881 ORTHO05D007298 1.7e-23 112.5 70 80.0
Rhsim11G0129900 Rhododendron simsii HOM05D005881 ORTHO05D007298 3.8e-23 111.3 60 85.0
Zm00001eb244030 Zea mays HOM05D005881 ORTHO05D007298 3.8e-23 111.3 71 71.8
unitig_22.g6105 Utricularia gibba HOM05D005881 ORTHO05D007298 5.0e-23 110.9 67 74.6
Mapoly0035s0117 Marchantia polymorpha HOM05D005881 ORTHO05D007298 9.4e-22 106.7 74 63.5
A08p15220 Brassica napus HOM05D005881 ORTHO05D007298 2.1e-21 105.5 68 73.5
Haze_10008 Corylus avellana HOM05D000045 ORTHO05D001346 3.6e-21 104.8 66 80.3
Phvul.006G085400 Phaseolus vulgaris HOM05D005881 ORTHO05D007298 1.0e-20 103.2 50 82.0
Haze_09300 Corylus avellana HOM05D005881 ORTHO05D007298 1.8e-20 102.4 72 76.4
AagrBONN_evm.TU.Sc2ySwM_117.2390 Anthoceros agrestis HOM05D005881 ORTHO05D007298 2.3e-20 102.1 89 53.9
Haze_10676 Corylus avellana HOM05D005881 ORTHO05D007298 2.3e-20 102.1 72 75.0
Rhsim06G0200500 Rhododendron simsii HOM05D005881 ORTHO05D007298 5.2e-20 100.9 63 74.6
EL10Ac4g10162 Beta vulgaris HOM05D002030 ORTHO05D007413 1.7e-18 95.9 62 66.1
EL10Ac4g07780 Beta vulgaris HOM05D000065 ORTHO05D002939 1.4e-17 92.8 61 65.6
EL10Ac4g07877 Beta vulgaris HOM05D005881 ORTHO05D007298 1.4e-17 92.8 61 65.6
C04p26430 Brassica napus HOM05D005881 ORTHO05D007298 1.6e-16 89.4 49 73.5
BolC4t24162H Brassica oleracea HOM05D005881 ORTHO05D007298 1.6e-16 89.4 49 73.5
BcaC02g10665 Brassica carinata HOM05D005881 ORTHO05D007298 7.7e-16 87.0 73 57.5
HPP92_009201 Vanilla planifolia HOM05D005881 ORTHO05D007298 1.7e-15 85.9 49 79.6
EL10Ac7g16281 Beta vulgaris HOM05D005881 ORTHO05D007298 6.6e-15 84.0 66 57.6
MBI06_g35042_MAGBIO Magnolia biondii HOM05D005881 ORTHO05D007298 6.1e-13 77.4 61 62.3
MELO3C032219.2 Cucumis melo HOM05D005881 ORTHO05D007298 2.0e-11 72.4 35 82.9
arahy.Tifrunner.gnm1.ann1.0A1TZX Arachis hypogaea HOM05D001400 ORTHO05D016394 5.7e-11 70.9 47 61.7
Nitab4.5_0001129g0150 Nicotiana tabacum HOM05D005881 ORTHO05D007298 1.7e-10 69.3 39 89.7
EL10Ac4g10126 Beta vulgaris HOM05D002030 ORTHO05D007413 6.3e-10 67.4 50 60.0
MCO07G551 Micromonas commoda HOM05D005881 ORTHO05D007298 4.1e-09 64.7 71 38.0
SHI38298 Sapria himalayana HOM05D005881 ORTHO05D000001 3.5e-08 61.6 39 61.5
SalBow5G0226 Salvia bowleyana HOM05D005881 ORTHO05D007298 1.5e-06 56.2 36 66.7


User provided reference genes

Program Settings