Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 3.9e-72 274.6 134 100.0
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 6.2e-33 144.4 117 67.5
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 1.1e-24 117.1 119 55.5
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 1.8e-24 116.3 116 57.8
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 4.0e-24 115.2 119 53.8
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 5.2e-24 114.8 118 55.1
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 7.5e-23 110.9 116 55.2
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 2.9e-22 109.0 116 56.0
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 2.9e-22 109.0 117 50.4
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 1.1e-21 107.1 119 50.4
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 2.4e-21 105.9 119 50.4
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 2.4e-21 105.9 117 52.1
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 5.4e-21 104.8 119 49.6
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 1.6e-20 103.2 118 47.5
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 2.1e-20 102.8 119 49.6
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 2.1e-20 102.8 116 50.9
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 2.1e-20 102.8 119 48.7
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 2.7e-20 102.4 130 44.6
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 3.5e-20 102.1 118 46.6
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 4.6e-20 101.7 116 49.1
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 4.6e-20 101.7 119 48.7
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 6.0e-20 101.3 116 46.6
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 1.3e-19 100.1 118 45.8
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 1.3e-19 100.1 118 45.8
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 1.7e-19 99.8 119 47.9
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 3.0e-19 99.0 116 46.6
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 3.0e-19 99.0 116 47.4
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 3.9e-19 98.6 116 45.7
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 5.1e-19 98.2 116 45.7
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 3.3e-18 95.5 117 47.0
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 5.6e-18 94.7 116 46.6
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 5.6e-18 94.7 116 46.6
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 7.3e-18 94.4 123 45.5
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 7.3e-18 94.4 116 48.3
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 9.5e-18 94.0 116 44.0
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 1.2e-17 93.6 118 48.3
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 1.6e-17 93.2 127 44.9
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 2.8e-17 92.4 119 45.4
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 4.7e-17 91.7 121 42.1
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 4.7e-17 91.7 116 47.4
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 6.2e-17 91.3 116 44.0
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 6.2e-17 91.3 119 46.2
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 8.1e-17 90.9 116 44.8
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 1.1e-16 90.5 118 48.3
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 2.3e-16 89.4 117 41.0
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 3.1e-16 89.0 118 43.2
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 4.0e-16 88.6 119 45.4
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 6.8e-16 87.8 121 46.3
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 3.4e-15 85.5 131 35.9
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 7.6e-15 84.3 118 39.0
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 9.9e-15 84.0 123 41.5
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 1.3e-14 83.6 116 44.0
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 2.2e-14 82.8 117 42.7
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 2.9e-14 82.4 124 39.5
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 3.7e-14 82.0 118 44.1
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 4.9e-14 81.6 78 53.8
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 1.4e-13 80.1 116 39.7
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 1.4e-13 80.1 116 40.5
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 1.4e-13 80.1 116 38.8
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 3.2e-13 79.0 116 39.7
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 3.2e-13 79.0 117 41.0
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 3.2e-13 79.0 119 40.3
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 4.1e-13 78.6 116 38.8
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 5.4e-13 78.2 116 39.7
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 5.4e-13 78.2 116 38.8
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 7.1e-13 77.8 116 41.4
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 7.1e-13 77.8 117 40.2
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 7.1e-13 77.8 118 41.5
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 1.2e-12 77.0 119 42.0
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 1.2e-12 77.0 116 37.9
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 1.6e-12 76.6 116 38.8
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 1.6e-12 76.6 116 36.2
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 1.6e-12 76.6 117 40.2
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 2.1e-12 76.3 116 39.7
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 2.7e-12 75.9 126 37.3
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 3.5e-12 75.5 117 35.0
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 4.6e-12 75.1 116 40.5
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 4.6e-12 75.1 116 40.5
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 4.6e-12 75.1 116 38.8
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 1.3e-11 73.6 113 41.6
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 1.3e-11 73.6 119 42.9
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 1.7e-11 73.2 117 36.8
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 2.3e-11 72.8 116 38.8
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 3.9e-11 72.0 116 37.9
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 3.9e-11 72.0 116 37.9
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 3.9e-11 72.0 117 35.0
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 3.9e-11 72.0 117 35.0
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 8.6e-11 70.9 119 39.5
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 1.1e-10 70.5 117 37.6
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 1.5e-10 70.1 120 33.3
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 1.5e-10 70.1 115 36.5
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 2.5e-10 69.3 116 37.1
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 5.6e-10 68.2 121 39.7
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 5.6e-10 68.2 117 35.9
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 7.3e-10 67.8 118 39.0
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 7.3e-10 67.8 91 42.9
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 7.3e-10 67.8 91 42.9
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 9.6e-10 67.4 98 40.8
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 1.2e-09 67.0 116 31.9
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 1.6e-09 66.6 93 39.8
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 2.1e-09 66.2 120 32.5
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 6.2e-09 64.7 93 38.7
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 8.1e-09 64.3 120 31.7
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 4.4e-07 58.5 123 33.3
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 1.7e-06 56.6 127 33.1
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 8.4e-06 54.3 70 42.9


User provided reference genes

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