Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 2.3e-233 812.0 444 100.0
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 4.0e-129 465.7 443 59.4
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 6.0e-125 451.8 472 53.2
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 4.0e-121 439.1 496 50.8
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 2.2e-119 433.3 468 58.1
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 2.4e-118 429.9 452 54.0
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 1.2e-117 427.6 447 52.3
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 2.1e-117 426.8 465 49.9
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 3.0e-116 422.9 450 51.3
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 3.0e-116 422.9 448 51.1
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 1.2e-114 417.5 332 65.1
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 1.6e-114 417.2 451 51.0
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 4.0e-113 412.5 447 50.1
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 5.2e-113 412.1 443 50.1
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 6.8e-113 411.8 447 49.9
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 2.6e-112 409.8 444 55.4
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 3.4e-112 409.5 445 50.8
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 9.9e-112 407.9 443 50.1
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 1.3e-111 407.5 463 51.0
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 1.7e-111 407.1 446 50.2
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 2.2e-111 406.8 447 49.7
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 6.4e-111 405.2 444 50.7
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 1.2e-109 401.0 445 50.1
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 2.7e-109 399.8 445 49.2
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 1.0e-108 397.9 444 50.0
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 1.0e-108 397.9 334 60.2
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 1.0e-108 397.9 461 49.0
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 1.3e-108 397.5 447 50.6
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 6.6e-108 395.2 453 49.9
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 1.9e-107 393.7 480 47.5
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 1.9e-107 393.7 335 61.2
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 4.3e-107 392.5 454 49.6
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 9.6e-107 391.3 445 47.9
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 9.6e-107 391.3 443 49.0
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 1.6e-106 390.6 445 48.1
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 2.1e-106 390.2 335 59.7
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 2.8e-106 389.8 443 48.5
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 8.1e-106 388.3 445 54.6
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 3.1e-105 386.3 316 59.5
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 5.3e-105 385.6 286 64.0
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 6.9e-105 385.2 314 60.8
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 9.0e-105 384.8 447 47.4
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 1.2e-104 384.4 422 48.6
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 2.6e-104 383.3 444 49.5
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 3.4e-104 382.9 450 49.8
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 9.9e-104 381.3 455 48.6
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 9.9e-104 381.3 328 58.8
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 1.3e-103 380.9 286 62.6
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 2.9e-103 379.8 452 48.5
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 4.9e-103 379.0 445 48.1
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 4.9e-103 379.0 445 48.3
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 4.9e-103 379.0 324 59.3
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 1.2e-101 374.4 445 47.6
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 4.6e-101 372.5 459 46.8
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 3.9e-100 369.4 447 46.3
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 6.6e-100 368.6 415 52.5
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 4.3e-99 365.9 286 61.5
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 4.8e-98 362.5 283 60.4
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 8.1e-98 361.7 446 46.0
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 2.4e-97 360.1 335 56.1
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 2.4e-97 360.1 335 56.1
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 2.4e-97 360.1 328 54.9
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 2.4e-97 360.1 332 55.1
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 4.0e-97 359.4 316 55.4
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 9.0e-97 358.2 329 53.8
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 3.4e-96 356.3 350 53.4
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 3.4e-96 356.3 350 53.4
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 4.5e-96 355.9 332 53.9
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 2.9e-95 353.2 336 54.5
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 3.8e-95 352.8 461 45.3
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 8.4e-95 351.7 355 53.0
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 5.4e-94 349.0 329 54.7
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 7.1e-94 348.6 357 50.4
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 3.5e-93 346.3 313 54.6
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 6.0e-93 345.5 473 44.2
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 1.0e-92 344.7 332 53.6
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 1.0e-92 344.7 446 44.6
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 6.7e-92 342.0 284 58.1
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 1.0e-84 318.2 345 47.2
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 9.6e-83 311.6 284 54.6
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 6.5e-79 298.9 324 48.8
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 1.1e-78 298.1 325 51.7
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 1.0e-76 291.6 332 47.9
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 2.5e-75 287.0 336 60.4
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 3.3e-75 286.6 208 65.9
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 5.7e-75 285.8 323 49.8
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 1.3e-74 284.6 218 64.7
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 2.2e-74 283.9 497 39.0
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 2.4e-73 280.4 343 46.9
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 5.0e-71 272.7 336 44.0
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 2.4e-65 253.8 288 47.6
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 6.9e-65 252.3 295 55.6
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 7.7e-64 248.8 305 47.2
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 2.7e-61 240.4 399 40.6
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 6.7e-60 235.7 295 46.1
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 4.1e-57 226.5 229 49.8
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 7.7e-56 222.2 178 61.2
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 1.3e-55 221.5 216 51.4
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 1.3e-47 194.9 187 51.9
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 1.9e-46 191.0 214 49.5
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 2.9e-39 167.2 318 34.6
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 1.5e-38 164.9 99 76.8
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 1.9e-38 164.5 149 55.0
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 1.6e-37 161.4 275 36.0
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 8.3e-34 149.1 230 45.2
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 7.7e-32 142.5 267 37.8
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 1.7e-31 141.4 120 58.3
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 5.6e-30 136.3 91 64.8
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 6.1e-29 132.9 84 66.7
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 7.5e-27 125.9 339 29.2
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 2.5e-22 110.9 260 31.2
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 1.6e-21 108.2 176 35.2
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 8.3e-18 95.9 84 48.8
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 1.2e-11 75.5 182 31.9
Prupe.2G270900 Prunus persica HOM05D006769 ORTHO05D008522 3.2e-09 67.4 58 56.9
Prupe.6G190400 Prunus persica HOM05D006769 ORTHO05D008522 1.2e-08 65.5 47 61.7
vmacro02813 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 1.3e-07 62.0 96 40.6
Os06g0471100 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 8.6e-07 59.3 41 61.0


User provided reference genes

Program Settings