Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu003558.1 Olea europaea HOM05D000726 ORTHO05D007554 2.9e-202 708.4 365 100.0
MSTRG.23676 Avicennia marina HOM05D000726 ORTHO05D007554 2.8e-136 489.2 362 71.3
Migut.H00354 Erythranthe guttata HOM05D000726 ORTHO05D007554 4.1e-132 475.3 362 70.7
SGA_v2.0_scaffold15G07449 Striga asiatica HOM05D000726 ORTHO05D007554 9.2e-132 474.2 359 71.3
CSS0015479 Camellia sinensis var. sinensis HOM05D000726 ORTHO05D007554 2.7e-131 472.6 361 69.3
vmacro05404 Vaccinium macrocarpon HOM05D000726 ORTHO05D007554 7.6e-126 454.5 365 66.0
CSS0022432 Camellia sinensis var. sinensis HOM05D000726 ORTHO05D007554 8.4e-125 451.1 361 67.0
PGSC0003DMG400009094 Solanum tuberosum HOM05D000726 ORTHO05D007554 3.6e-120 435.6 364 64.3
Nitab4.5_0001417g0030 Nicotiana tabacum HOM05D000726 ORTHO05D007554 8.1e-120 434.5 366 65.3
Sopen03g007820 Solanum pennellii HOM05D000726 ORTHO05D007554 2.4e-119 433.0 364 63.5
Nitab4.5_0006813g0010 Nicotiana tabacum HOM05D000726 ORTHO05D007554 2.6e-118 429.5 365 64.7
Solyc03g044020.4 Solanum lycopersicum HOM05D000726 ORTHO05D007554 3.4e-118 429.1 364 62.9
Haze_15292 Corylus avellana HOM05D000726 ORTHO05D007554 9.9e-118 427.6 370 64.1
Rhsim10G0100700 Rhododendron simsii HOM05D000726 ORTHO05D007554 2.2e-117 426.4 375 62.9
TAR376G0399 Trochodendron aralioides HOM05D000726 ORTHO05D007554 2.2e-117 426.4 366 61.5
Cfa004123 Carpinus fangiana HOM05D000726 ORTHO05D007554 8.4e-117 424.5 370 63.8
ClCG01G017520 Citrullus lanatus HOM05D000726 ORTHO05D007554 8.4e-117 424.5 373 61.1
unitig_0.g505 Utricularia gibba HOM05D000726 ORTHO05D007554 9.3e-116 421.0 361 62.9
Sed0012994 Sechium edule HOM05D000726 ORTHO05D007554 1.2e-115 420.6 369 60.4
Atru.chr3.177 Acer truncatum HOM05D000726 ORTHO05D007554 2.7e-115 419.5 361 62.6
Sc03g0002340 Simmondsia chinensis HOM05D000726 ORTHO05D007554 4.6e-115 418.7 363 62.0
CAN.G278.12 Capsicum annuum HOM05D000726 ORTHO05D007554 1.0e-114 417.5 364 62.9
Nn4g25316 Nelumbo nucifera HOM05D000726 ORTHO05D007554 1.0e-114 417.5 365 60.0
Cpa.g.sc6.26 Carica papaya HOM05D000726 ORTHO05D007554 3.9e-114 415.6 365 61.9
MELO3C007629.2 Cucumis melo HOM05D000726 ORTHO05D007554 1.1e-113 414.1 373 60.6
Lj7A95G20 Lonicera japonica HOM05D000726 ORTHO05D007554 2.5e-113 412.9 360 60.3
Cc07_g07020 Coffea canephora HOM05D000726 ORTHO05D007554 5.6e-113 411.8 363 63.1
TWI09G1290 Tripterygium wilfordii HOM05D000726 ORTHO05D007554 1.6e-112 410.2 365 60.5
CsaV3_6G044070 Cucumis sativus L. HOM05D000726 ORTHO05D007554 2.1e-112 409.8 373 59.5
Lsat_1_v5_gn_4_160781 Lactuca sativa HOM05D000726 ORTHO05D007554 2.1e-112 409.8 376 59.8
HanXRQChr12g0373111 Helianthus annuus HOM05D000726 ORTHO05D007554 6.2e-112 408.3 373 59.2
PGR102G1358 Punica granatum HOM05D000726 ORTHO05D007554 8.1e-112 407.9 363 61.2
arahy.Tifrunner.gnm1.ann1.1ZHU8Z Arachis hypogaea HOM05D000726 ORTHO05D007554 1.4e-111 407.1 362 60.2
Hund16395 Selenicereus undatus HOM05D000726 ORTHO05D007554 5.3e-111 405.2 358 61.2
AUR62003999 Chenopodium quinoa HOM05D000726 ORTHO05D007554 6.9e-111 404.8 365 61.1
Prupe.6G221900 Prunus persica HOM05D000726 ORTHO05D007554 4.5e-110 402.1 367 59.1
arahy.Tifrunner.gnm1.ann1.6361M0 Arachis hypogaea HOM05D000726 ORTHO05D007554 5.8e-110 401.7 362 59.4
Ciclev10024730m.g Citrus clementina HOM05D000726 ORTHO05D007554 7.6e-110 401.4 361 59.8
MD02G1184600 Malus domestica HOM05D000726 ORTHO05D007554 1.7e-109 400.2 367 58.6
Actinidia36435 Actinidia chinensis HOM05D000726 ORTHO05D007554 2.2e-109 399.8 362 59.4
CARHR056360 Cardamine hirsuta HOM05D000726 ORTHO05D007554 3.8e-109 399.1 364 58.2
ECA232G2303 Erigeron canadensis HOM05D000726 ORTHO05D007554 4.9e-109 398.7 374 57.0
Medtr5g015600 Medicago truncatula HOM05D000726 ORTHO05D007554 8.4e-109 397.9 360 59.2
Peaxi162Scf00118g01929 Petunia axillaris HOM05D000726 ORTHO05D007554 8.4e-109 397.9 362 60.5
EL10Ac6g15628 Beta vulgaris HOM05D000726 ORTHO05D007554 1.1e-108 397.5 360 59.2
Gohir.D11G207900 Gossypium hirsutum HOM05D000726 ORTHO05D007554 1.4e-108 397.1 361 60.1
Gorai.007G222900 Gossypium raimondii HOM05D000726 ORTHO05D007554 1.9e-108 396.7 361 60.4
RcHm_v2.0_Chr2g0138631 Rosa chinensis HOM05D000726 ORTHO05D007554 2.4e-108 396.4 369 59.1
AT1G64960 Arabidopsis thaliana HOM05D000726 ORTHO05D007554 5.4e-108 395.2 366 57.7
Manes.13G112300 Manihot esculenta HOM05D000726 ORTHO05D007554 5.4e-108 395.2 363 58.7
PSO675G6338 Papaver somniferum HOM05D000726 ORTHO05D007554 9.3e-108 394.4 372 55.4
Gohir.A11G215400 Gossypium hirsutum HOM05D000726 ORTHO05D007554 1.6e-107 393.7 361 60.4
Aqoxy6G02647 Aquilegia oxysepala HOM05D000726 ORTHO05D007554 2.1e-107 393.3 371 56.6
DCAR_010826 Daucus carota HOM05D000726 ORTHO05D007554 2.1e-107 393.3 361 58.2
Thecc.01G071800 Theobroma cacao HOM05D000726 ORTHO05D007554 2.7e-107 392.9 360 60.6
Ca_24700_v3 Cicer arietinum L. HOM05D000726 ORTHO05D007554 4.6e-107 392.1 362 60.2
FAN05G3645 Fragaria x ananassa HOM05D000726 ORTHO05D007554 4.6e-107 392.1 365 59.5
Psat2g171280 Pisum sativum HOM05D000726 ORTHO05D007554 1.0e-106 391.0 363 60.1
Eucgr.H02305 Eucalyptus grandis HOM05D000726 ORTHO05D007554 2.3e-106 389.8 369 57.2
PSO541G0636 Papaver somniferum HOM05D000726 ORTHO05D007554 3.0e-106 389.4 373 55.5
FvH4_6g31560 Fragaria vesca HOM05D000726 ORTHO05D007554 5.1e-106 388.7 360 59.7
Thhalv10000018m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 6.7e-106 388.3 363 57.0
CiPaw.01G005400 Carya illinoinensis HOM05D000726 ORTHO05D007554 2.5e-105 386.3 370 57.6
FAN14G0573 Fragaria x ananassa HOM05D000726 ORTHO05D007554 5.6e-105 385.2 360 58.6
Ah.03g140460 Amaranthus hybridus HOM05D000726 ORTHO05D007554 7.4e-105 384.8 361 59.3
Thhalv10023223m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 7.4e-105 384.8 363 57.0
Phvul.002G011500 Phaseolus vulgaris HOM05D000726 ORTHO05D007554 2.8e-104 382.9 361 57.3
VMungo1215G2083 Vigna mungo HOM05D000726 ORTHO05D007554 6.2e-104 381.7 363 57.3
AL2G19510 Arabidopsis lyrata HOM05D000726 ORTHO05D007554 1.4e-103 380.6 365 56.7
QL06p039670 Quercus lobata HOM05D000726 ORTHO05D007554 1.4e-103 380.6 367 57.2
Sp5g19220 Schrenkiella parvula HOM05D000726 ORTHO05D007554 1.8e-103 380.2 360 56.1
Aa31LG2G2150 Aethionema arabicum HOM05D000726 ORTHO05D007554 3.1e-103 379.4 362 55.5
CANSAT01G3261 Cannabis sativa HOM05D000726 ORTHO05D007554 3.1e-103 379.4 368 56.8
Glyma.01G193500 Glycine max HOM05D000726 ORTHO05D007554 4.0e-103 379.0 363 56.5
FAN02G1686 Fragaria x ananassa HOM05D000726 ORTHO05D007554 3.4e-102 375.9 361 57.6
THA.LOC104819266 Tarenaya hassleriana HOM05D000726 ORTHO05D007554 5.8e-102 375.2 364 55.5
Duzib147G0272 Durio zibethinus HOM05D000726 ORTHO05D007554 2.9e-101 372.9 361 57.6
FAN09G4729 Fragaria x ananassa HOM05D000726 ORTHO05D007554 2.5e-100 369.8 360 57.5
Sabra07G0047700 Salix brachista HOM05D000726 ORTHO05D007554 3.2e-100 369.4 359 57.9
TPR.G34847 Trifolium pratense HOM05D000726 ORTHO05D007554 1.3e-98 364.0 360 55.0
Lj2g0006912 Lotus japonicus HOM05D000726 ORTHO05D007554 3.0e-98 362.8 360 55.6
Lalb_Chr09g0323571 Lupinus albus HOM05D000726 ORTHO05D007554 1.1e-97 360.9 309 59.2
SHI31766 Sapria himalayana HOM05D000726 ORTHO05D007554 4.8e-96 355.5 367 54.5
Potri.007G055400 Populus trichocarpa HOM05D000726 ORTHO05D007554 6.2e-96 355.1 352 56.2
Sabra16G0084600 Salix brachista HOM05D000726 ORTHO05D007554 2.4e-95 353.2 344 57.6
Sabra11G0026400 Salix brachista HOM05D000726 ORTHO05D007554 6.9e-95 351.7 347 57.6
BcaB03g15339 Brassica carinata HOM05D000726 ORTHO05D007554 1.2e-94 350.9 361 52.9
Sabra11G0056500 Salix brachista HOM05D000726 ORTHO05D007554 2.2e-93 346.7 343 57.1
C06p38860 Brassica napus HOM05D000726 ORTHO05D007554 7.2e-92 341.7 361 52.4
BolC6t38979H Brassica oleracea HOM05D000726 ORTHO05D007554 3.5e-91 339.3 361 52.1
Thhalv10006613m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 6.1e-91 338.6 314 57.3
CDE04G3158 Ceratophyllum demersum HOM05D000726 ORTHO05D007554 3.9e-90 335.9 370 51.4
A07p32680 Brassica napus HOM05D000726 ORTHO05D007554 2.2e-88 330.1 362 51.1
BraA07t30892Z Brassica rapa HOM05D000726 ORTHO05D007554 2.2e-88 330.1 362 51.1
COL.COLO4_11566 Corchorus olitorius HOM05D000726 ORTHO05D007554 2.8e-88 329.7 365 52.6
HPP92_014039 Vanilla planifolia HOM05D000726 ORTHO05D007554 1.4e-87 327.4 373 48.8
ATR0208G028 Amborella trichopoda HOM05D000726 ORTHO05D007554 1.8e-87 327.0 403 47.9
Atru.BG.105.p Acer truncatum HOM05D000726 ORTHO05D007554 2.9e-85 319.7 226 72.6
Thhalv10001287m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 4.2e-76 289.3 364 48.6
SMO364G0657 Selaginella moellendorffii HOM05D000726 ORTHO05D007554 5.9e-70 268.9 294 48.3
SEGI_06920 Sequoiadendron giganteum HOM05D000726 ORTHO05D007554 8.2e-64 248.4 369 38.5
Mapoly0045s0033 Marchantia polymorpha HOM05D000726 ORTHO05D007554 5.3e-63 245.7 376 37.8
AagrBONN_evm.TU.Sc2ySwM_117.495 Anthoceros agrestis HOM05D000726 ORTHO05D007554 1.0e-58 231.5 242 47.1
Carub.0002s1010 Capsella rubella HOM05D000726 ORTHO05D007554 1.7e-53 214.2 154 67.5
SEGI_24863 Sequoiadendron giganteum HOM05D000726 ORTHO05D007554 2.2e-48 197.2 294 38.1
HPP92_028352 Vanilla planifolia HOM05D000726 ORTHO05D007554 4.5e-46 189.5 150 60.0
Os03g0616500 Oryza sativa ssp. japonica HOM05D000726 ORTHO05D007554 9.5e-44 181.8 249 41.0
Zm00001eb051460 Zea mays HOM05D000726 ORTHO05D007554 1.4e-42 177.9 248 40.3
GSVIVG01000124001 Vitis vinifera HOM05D000726 ORTHO05D007554 5.9e-38 162.5 111 72.1
PRCOL_00006071 Prasinoderma coloniale HOM05D000726 ORTHO05D007554 7.8e-38 162.2 219 36.1
Dinv26921 Davidia involucrata HOM05D000726 ORTHO05D007554 4.3e-36 156.4 111 71.2
Cre06.g262800 Chlamydomonas reinhardtii HOM05D000726 ORTHO05D007554 1.4e-34 151.4 282 34.8
AUR62040247 Chenopodium quinoa HOM05D000726 ORTHO05D007554 6.0e-30 136.0 97 67.0
Glyma.11G048432 Glycine max HOM05D000726 ORTHO05D007554 8.1e-27 125.6 97 62.9
CBR_g29418 Chara braunii HOM05D000019 ORTHO05D000002 2.1e-22 110.9 128 46.1
Lj7C94G0 Lonicera japonica HOM05D000726 ORTHO05D007554 9.5e-20 102.1 203 36.0
Lsat_1_v5_gn_2_113660 Lactuca sativa HOM05D000726 ORTHO05D007554 2.8e-11 73.9 61 57.4
SEGI_38739 Sequoiadendron giganteum HOM05D000726 ORTHO05D007554 9.9e-09 65.5 58 51.7


User provided reference genes

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