Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu003482.1 Olea europaea HOM05D004961 ORTHO05D006258 0.0e+00 1248.0 603 100.0
Oeu005782.1 Olea europaea HOM05D004961 ORTHO05D006258 7.1e-246 854.0 614 69.7
Oeu037913.2 Olea europaea HOM05D004961 ORTHO05D006258 1.6e-237 826.2 604 68.7
SalBow5G3969 Salvia bowleyana HOM05D004961 ORTHO05D006258 6.2e-234 814.3 661 64.3
SalBow5G5559 Salvia bowleyana HOM05D004961 ORTHO05D006258 6.2e-234 814.3 661 64.3
Migut.B01640 Erythranthe guttata HOM05D004961 ORTHO05D006258 3.7e-218 761.9 659 60.2
SGA_v2.0_scaffold11G05589 Striga asiatica HOM05D004961 ORTHO05D006258 2.5e-206 722.6 659 58.3
Migut.N01639 Erythranthe guttata HOM05D004961 ORTHO05D006258 9.4e-206 720.7 660 57.0
Cc02_g36640 Coffea canephora HOM05D004961 ORTHO05D006258 3.6e-197 692.2 655 56.0
vmacro13395 Vaccinium macrocarpon HOM05D004961 ORTHO05D006258 5.5e-190 668.3 658 53.6
Nitab4.5_0000457g0390 Nicotiana tabacum HOM05D004961 ORTHO05D006258 1.2e-189 667.2 675 55.4
Thecc.01G375500 Theobroma cacao HOM05D004961 ORTHO05D006258 2.1e-189 666.4 663 54.3
Gohir.D11G085600 Gossypium hirsutum HOM05D004961 ORTHO05D006258 2.3e-188 662.9 668 54.0
Haze_16810 Corylus avellana HOM05D004961 ORTHO05D006258 3.0e-188 662.5 667 54.6
Gohir.A11G081100 Gossypium hirsutum HOM05D004961 ORTHO05D006258 3.9e-188 662.1 668 54.0
Cfa001712 Carpinus fangiana HOM05D004961 ORTHO05D006258 8.8e-188 661.0 667 54.3
Manes.05G044700 Manihot esculenta HOM05D004961 ORTHO05D006258 1.1e-187 660.6 658 54.1
Gorai.007G091500 Gossypium raimondii HOM05D004961 ORTHO05D006258 2.0e-187 659.8 668 54.0
Nitab4.5_0005372g0040 Nicotiana tabacum HOM05D004961 ORTHO05D006258 2.0e-187 659.8 675 55.0
CSS0024555 Camellia sinensis var. sinensis HOM05D004961 ORTHO05D006258 8.2e-186 654.4 664 52.9
COL.COLO4_12554 Corchorus olitorius HOM05D004961 ORTHO05D006258 8.2e-186 654.4 660 53.3
CSS0035955 Camellia sinensis var. sinensis HOM05D004961 ORTHO05D006258 7.7e-184 647.9 673 52.3
TWI14G0737 Tripterygium wilfordii HOM05D004961 ORTHO05D006258 1.7e-183 646.7 662 53.0
Rhsim07G0027200 Rhododendron simsii HOM05D004961 ORTHO05D006258 6.5e-183 644.8 614 53.4
TWI59G0003 Tripterygium wilfordii HOM05D004961 ORTHO05D006258 1.9e-182 643.3 661 53.3
Dinv43717 Davidia involucrata HOM05D004961 ORTHO05D006258 2.5e-182 642.9 646 54.0
PGR031G0429 Punica granatum HOM05D004961 ORTHO05D006258 3.2e-182 642.5 551 57.9
QL08p052244 Quercus lobata HOM05D004961 ORTHO05D006258 3.2e-182 642.5 667 54.1
CANSAT56G2246 Cannabis sativa HOM05D004961 ORTHO05D006258 1.2e-181 640.6 662 52.4
Duzib133G1444 Durio zibethinus HOM05D004961 ORTHO05D006258 2.1e-181 639.8 660 53.0
CiPaw.01G261500 Carya illinoinensis HOM05D004961 ORTHO05D006258 3.6e-181 639.0 666 52.6
Hma1.2p1_0033F.1_g021010 Hydrangea macrophylla HOM05D004961 ORTHO05D006258 3.6e-181 639.0 671 52.3
Hma1.2p1_2294F.1_g319110 Hydrangea macrophylla HOM05D004961 ORTHO05D006258 6.1e-181 638.3 671 52.3
FAN10G1405 Fragaria x ananassa HOM05D004961 ORTHO05D006258 1.0e-180 637.5 661 52.0
FvH4_7g11970 Fragaria vesca HOM05D004961 ORTHO05D006258 1.4e-180 637.1 661 52.0
Actinidia12261 Actinidia chinensis HOM05D004961 ORTHO05D006258 1.8e-180 636.7 636 54.4
Lalb_Chr13g0291711 Lupinus albus HOM05D004961 ORTHO05D006258 3.0e-180 636.0 589 55.0
FAN01G0106 Fragaria x ananassa HOM05D004961 ORTHO05D006258 4.0e-180 635.6 659 52.0
FAN06G1099 Fragaria x ananassa HOM05D004961 ORTHO05D006258 4.0e-180 635.6 661 51.9
Sopen01g037160 Solanum pennellii HOM05D004961 ORTHO05D006258 5.2e-180 635.2 555 59.3
CAN.G388.8 Capsicum annuum HOM05D004961 ORTHO05D006258 6.8e-180 634.8 674 52.8
Gohir.D08G042400 Gossypium hirsutum HOM05D004961 ORTHO05D006258 6.8e-180 634.8 660 53.2
CiPaw.02G167000 Carya illinoinensis HOM05D004961 ORTHO05D006258 8.8e-180 634.4 665 52.5
Solyc01g091390.2 Solanum lycopersicum HOM05D004961 ORTHO05D006258 1.2e-179 634.0 555 59.1
FAN03G2819 Fragaria x ananassa HOM05D004961 ORTHO05D006258 2.6e-179 632.9 629 53.4
FAN10G1351 Fragaria x ananassa HOM05D004961 ORTHO05D006258 2.6e-179 632.9 661 51.7
Gorai.004G041000 Gossypium raimondii HOM05D004961 ORTHO05D006258 2.6e-179 632.9 660 53.0
FAN06G1287 Fragaria x ananassa HOM05D004961 ORTHO05D006258 5.7e-179 631.7 661 51.7
Sabra14G0049800 Salix brachista HOM05D004961 ORTHO05D006258 5.7e-179 631.7 649 52.9
TAR629G2710 Trochodendron aralioides HOM05D004961 ORTHO05D006258 5.7e-179 631.7 626 54.2
RcHm_v2.0_Chr1g0350691 Rosa chinensis HOM05D004961 ORTHO05D006258 7.5e-179 631.3 556 56.8
Lj9P570T30 Lonicera japonica HOM05D004961 ORTHO05D006258 3.7e-178 629.0 534 59.2
PGSC0003DMG400012758 Solanum tuberosum HOM05D004961 ORTHO05D006258 1.1e-177 627.5 555 58.7
Thhalv10005830m.g Eutrema salsugineum HOM05D004961 ORTHO05D006258 1.4e-177 627.1 663 51.7
MD02G1203100 Malus domestica HOM05D004961 ORTHO05D006258 2.4e-177 626.3 550 56.4
MD07G1123000 Malus domestica HOM05D004961 ORTHO05D006258 4.1e-177 625.5 672 50.3
Ciclev10019247m.g Citrus clementina HOM05D004961 ORTHO05D006258 5.3e-177 625.2 623 54.6
Potri.014G070200 Populus trichocarpa HOM05D004961 ORTHO05D006258 9.1e-177 624.4 659 52.7
Atru.chr5.317 Acer truncatum HOM05D004961 ORTHO05D006258 1.6e-176 623.6 558 58.4
Prupe.2G146400 Prunus persica HOM05D004961 ORTHO05D006258 7.7e-176 621.3 668 51.2
Gohir.A08G031300 Gossypium hirsutum HOM05D004961 ORTHO05D006258 2.9e-175 619.4 658 52.0
Ca_23848_v3 Cicer arietinum L. HOM05D004961 ORTHO05D006258 5.0e-175 618.6 563 54.7
Sp5g02400 Schrenkiella parvula HOM05D004961 ORTHO05D006258 2.5e-174 616.3 676 51.8
TPR.G21740 Trifolium pratense HOM05D004961 ORTHO05D006258 9.4e-174 614.4 564 54.1
Peaxi162Scf00021g01613 Petunia axillaris HOM05D004961 ORTHO05D006258 2.1e-173 613.2 623 54.4
TAR375G0417 Trochodendron aralioides HOM05D004961 ORTHO05D006258 6.1e-173 611.7 560 56.4
MELO3C006184.2 Cucumis melo HOM05D004961 ORTHO05D006258 1.0e-172 610.9 666 49.2
CsaV3_3G009640 Cucumis sativus L. HOM05D004961 ORTHO05D006258 1.4e-172 610.5 666 49.2
CARHR171240 Cardamine hirsuta HOM05D004961 ORTHO05D006258 6.8e-172 608.2 668 51.9
Nn4g26417 Nelumbo nucifera HOM05D004961 ORTHO05D006258 6.8e-172 608.2 561 55.6
EL10Ac1g00903 Beta vulgaris HOM05D004961 ORTHO05D006258 8.8e-172 607.8 556 55.4
Aqoxy7G00605 Aquilegia oxysepala HOM05D004961 ORTHO05D006258 3.4e-171 605.9 558 55.6
Medtr8g036115 Medicago truncatula HOM05D004961 ORTHO05D006258 5.7e-171 605.1 669 49.2
Aa31LG10G15080 Aethionema arabicum HOM05D004961 ORTHO05D006258 2.8e-170 602.8 665 50.8
Sed0003746 Sechium edule HOM05D004961 ORTHO05D006258 1.1e-169 600.9 665 49.3
AL5G43170 Arabidopsis lyrata HOM05D004961 ORTHO05D006258 5.4e-169 598.6 673 50.7
AUR62004223 Chenopodium quinoa HOM05D004961 ORTHO05D006258 1.2e-168 597.4 613 51.9
Ah.05g174990 Amaranthus hybridus HOM05D004961 ORTHO05D006258 4.5e-168 595.5 552 55.3
THA.LOC104802441 Tarenaya hassleriana HOM05D004961 ORTHO05D006258 1.3e-167 594.0 666 51.1
Carub.0005s2761 Capsella rubella HOM05D004961 ORTHO05D006258 1.7e-167 593.6 682 49.7
Lj3g0023798 Lotus japonicus HOM05D004961 ORTHO05D006258 1.7e-167 593.6 562 55.3
arahy.Tifrunner.gnm1.ann1.0VBM10 Arachis hypogaea HOM05D004961 ORTHO05D006258 3.8e-167 592.4 585 53.5
arahy.Tifrunner.gnm1.ann1.T4E2VP Arachis hypogaea HOM05D004961 ORTHO05D006258 6.6e-167 591.7 556 55.9
MBI12_g27776_MAGBIO Magnolia biondii HOM05D004961 ORTHO05D006258 1.5e-166 590.5 656 48.9
AT3G60850 Arabidopsis thaliana HOM05D004961 ORTHO05D006258 7.2e-166 588.2 673 50.4
Psat4g195520 Pisum sativum HOM05D004961 ORTHO05D006258 7.2e-166 588.2 541 54.2
Lalb_Chr07g0189751 Lupinus albus HOM05D004961 ORTHO05D006258 9.5e-166 587.8 607 52.7
PSO478G4809 Papaver somniferum HOM05D004961 ORTHO05D006258 1.6e-165 587.0 560 53.8
ECA236G4958 Erigeron canadensis HOM05D004961 ORTHO05D006258 4.7e-165 585.5 662 49.7
A09p53100 Brassica napus HOM05D004961 ORTHO05D006258 6.1e-165 585.1 664 51.1
BraA09t40736Z Brassica rapa HOM05D004961 ORTHO05D006258 1.0e-164 584.3 662 51.1
BcaC07g42645 Brassica carinata HOM05D004961 ORTHO05D006258 8.9e-164 581.3 663 50.7
C08p35800 Brassica napus HOM05D004961 ORTHO05D006258 8.9e-164 581.3 666 50.3
BcaC07g40605 Brassica carinata HOM05D004961 ORTHO05D006258 1.2e-163 580.9 666 50.5
BolC8t51170H Brassica oleracea HOM05D004961 ORTHO05D006258 1.2e-163 580.9 666 50.5
PSO782G4206 Papaver somniferum HOM05D004961 ORTHO05D006258 6.3e-162 575.1 558 53.2
DCAR_025114 Daucus carota HOM05D004961 ORTHO05D006258 1.4e-161 573.9 649 49.6
Sc26g0001210 Simmondsia chinensis HOM05D004961 ORTHO05D006258 7.0e-161 571.6 552 54.3
SHI25769 Sapria himalayana HOM05D004961 ORTHO05D006258 2.7e-160 569.7 631 49.9
Phvul.010G084800 Phaseolus vulgaris HOM05D004961 ORTHO05D006258 4.5e-160 568.9 566 53.9
VMungo0331G0268 Vigna mungo HOM05D004961 ORTHO05D006258 6.6e-159 565.1 566 53.2
Sed0025415 Sechium edule HOM05D004961 ORTHO05D006258 6.1e-157 558.5 612 49.3
Lsat_1_v5_gn_7_7241 Lactuca sativa HOM05D004961 ORTHO05D006258 1.4e-156 557.4 612 53.3
AUR62013625 Chenopodium quinoa HOM05D004961 ORTHO05D006258 8.9e-156 554.7 534 53.7
BcaC08g45088 Brassica carinata HOM05D004961 ORTHO05D006258 1.5e-155 553.9 668 49.3
ATR0810G227 Amborella trichopoda HOM05D004961 ORTHO05D006258 2.0e-155 553.5 625 48.6
Glyma.01G143700 Glycine max HOM05D004961 ORTHO05D006258 2.6e-155 553.1 579 51.3
Glyma.03G023401 Glycine max HOM05D004961 ORTHO05D006258 4.4e-155 552.4 577 50.6
C06p26950 Brassica napus HOM05D004961 ORTHO05D006258 5.8e-155 552.0 668 49.1
BolC6t37869H Brassica oleracea HOM05D004961 ORTHO05D006258 5.8e-155 552.0 668 49.1
HanXRQChr09g0245711 Helianthus annuus HOM05D004961 ORTHO05D006258 6.4e-154 548.5 608 49.8
ECA234G3702 Erigeron canadensis HOM05D004961 ORTHO05D006258 1.6e-152 543.9 655 45.6
A07p25240 Brassica napus HOM05D004961 ORTHO05D006258 1.5e-150 537.3 654 48.3
Nn4g26286 Nelumbo nucifera HOM05D004961 ORTHO05D006258 5.6e-150 535.4 505 55.2
HanXRQChr06g0169541 Helianthus annuus HOM05D004961 ORTHO05D006258 4.7e-149 532.3 521 54.5
BraA07t30166Z Brassica rapa HOM05D004961 ORTHO05D006258 8.3e-146 521.5 655 47.5
HanXRQChr03g0093851 Helianthus annuus HOM05D004961 ORTHO05D006258 1.1e-145 521.2 656 47.3
unitig_22.g6802 Utricularia gibba HOM05D004961 ORTHO05D006258 1.1e-145 521.2 380 67.9
GSVIVG01027619001 Vitis vinifera HOM05D004961 ORTHO05D006258 2.4e-145 520.0 469 59.5
CDE02G2832 Ceratophyllum demersum HOM05D004961 ORTHO05D006258 7.3e-142 508.4 614 46.9
unitig_8.g3388 Utricularia gibba HOM05D004961 ORTHO05D006258 6.0e-136 488.8 440 57.0
SEGI_19190 Sequoiadendron giganteum HOM05D004961 ORTHO05D006258 1.7e-135 487.3 657 43.7
CDE11G0257 Ceratophyllum demersum HOM05D004961 ORTHO05D006258 9.6e-134 481.5 466 56.9
HPP92_025672 Vanilla planifolia HOM05D004961 ORTHO05D006258 1.4e-132 477.6 642 44.9
HanXRQChr16g0519241 Helianthus annuus HOM05D004961 ORTHO05D006258 9.6e-126 454.9 554 46.4
Os03g0247100 Oryza sativa ssp. japonica HOM05D004961 ORTHO05D006258 3.1e-124 449.9 635 44.1
ATR0582G166 Amborella trichopoda HOM05D004961 ORTHO05D006258 5.6e-110 402.5 575 41.6
Zm00001eb398630 Zea mays HOM05D004961 ORTHO05D006258 1.9e-105 387.5 559 41.9
SGA_v2.0_scaffold43G16471 Striga asiatica HOM05D004961 ORTHO05D006258 3.7e-101 373.2 580 41.2
SMO164G0066 Selaginella moellendorffii HOM05D004961 ORTHO05D006258 5.5e-97 359.4 374 49.2
SMO358G0144 Selaginella moellendorffii HOM05D004961 ORTHO05D006258 9.7e-94 348.6 386 46.1
Eucgr.D02450 Eucalyptus grandis HOM05D004961 ORTHO05D006258 1.4e-81 308.1 330 48.2
BcaC07g40606 Brassica carinata HOM05D003135 ORTHO05D003715 1.4e-60 238.4 363 42.7
BcaB02g07397 Brassica carinata HOM05D004961 ORTHO05D006258 1.7e-58 231.5 330 43.9
Nn1g01213 Nelumbo nucifera HOM05D004961 ORTHO05D006258 6.1e-56 223.0 300 43.3
unitig_22.g6801 Utricularia gibba HOM05D004961 ORTHO05D006258 3.4e-54 217.2 231 49.4
Cpa.g.sc18.116 Carica papaya HOM05D004961 ORTHO05D006258 2.9e-45 187.6 569 27.4
Zm00001eb010600 Zea mays HOM05D004961 ORTHO05D006258 1.4e-39 168.7 213 45.1
BcaC07g40608 Brassica carinata HOM05D003135 ORTHO05D006258 8.3e-29 132.9 164 43.3
SMO115G0102 Selaginella moellendorffii HOM05D004961 ORTHO05D037335 1.9e-28 131.7 346 29.5
unitig_8.g3389 Utricularia gibba HOM05D004961 ORTHO05D006258 5.1e-26 123.6 136 52.2
BcaNung07137 Brassica carinata HOM05D004961 ORTHO05D006258 2.2e-21 108.2 56 89.3
HanXRQChr16g0519231 Helianthus annuus HOM05D004961 ORTHO05D006258 1.0e-18 99.4 101 51.5
AagrBONN_evm.TU.Sc2ySwM_344.1101 Anthoceros agrestis HOM05D004961 ORTHO05D006258 1.5e-14 85.5 164 31.1
BcaNung07139 Brassica carinata HOM05D004961 ORTHO05D006258 2.6e-14 84.7 87 51.7
BcaNung07135 Brassica carinata HOM05D004961 ORTHO05D006258 3.4e-14 84.3 209 34.4
MELO3C015747.2 Cucumis melo HOM05D004961 ORTHO05D044953 2.9e-13 81.3 132 40.2
SMO334G0060 Selaginella moellendorffii HOM05D004961 ORTHO05D377666 2.7e-11 74.7 187 27.3


User provided reference genes

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