Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu003422.1 Olea europaea HOM05D005312 ORTHO05D006459 1.3e-219 766.1 397 100.0
Oeu039797.1 Olea europaea HOM05D005312 ORTHO05D006459 4.7e-182 641.3 437 79.6
Sopen02g039150 Solanum pennellii HOM05D005312 ORTHO05D006459 1.7e-155 553.1 435 67.1
Solyc02g094480.4 Solanum lycopersicum HOM05D000001 ORTHO05D000003 4.9e-155 551.6 434 66.6
Peaxi162Scf00420g00087 Petunia axillaris HOM05D005312 ORTHO05D006459 1.9e-154 549.7 443 67.5
PGSC0003DMG400020194 Solanum tuberosum HOM05D005312 ORTHO05D006459 4.2e-154 548.5 440 66.6
Dinv33289 Davidia involucrata HOM05D005312 ORTHO05D006459 1.3e-150 537.0 439 68.1
CSS0036880 Camellia sinensis var. sinensis HOM05D005312 ORTHO05D006459 2.4e-149 532.7 444 66.9
CAN.G473.156 Capsicum annuum HOM05D005312 ORTHO05D006459 1.5e-148 530.0 448 65.4
Hma1.2p1_0868F.1_g230570 Hydrangea macrophylla HOM05D005312 ORTHO05D006459 5.5e-146 521.5 439 65.1
Cc07_g01210 Coffea canephora HOM05D005312 ORTHO05D006459 1.2e-145 520.4 451 65.9
MSTRG.3045 Avicennia marina HOM05D005312 ORTHO05D006459 2.7e-145 519.2 446 65.2
SalBow4G2016 Salvia bowleyana HOM05D005312 ORTHO05D006459 6.1e-145 518.1 448 64.5
Migut.F00017 Erythranthe guttata HOM05D005312 ORTHO05D006459 2.0e-143 513.1 447 64.4
Rhsim10G0001700 Rhododendron simsii HOM05D005312 ORTHO05D006459 2.5e-143 512.7 438 64.4
SGA_v2.0_scaffold44G16946 Striga asiatica HOM05D005312 ORTHO05D006459 9.7e-143 510.8 435 66.2
DCAR_002973 Daucus carota HOM05D005312 ORTHO05D006459 1.3e-142 510.4 411 65.7
Actinidia37728 Actinidia chinensis HOM05D005312 ORTHO05D006459 4.8e-142 508.4 440 65.2
vmacro22240 Vaccinium macrocarpon HOM05D005312 ORTHO05D006459 1.4e-141 506.9 403 66.0
Lj7A616T62 Lonicera japonica HOM05D005312 ORTHO05D006459 1.3e-139 500.4 399 67.2
Nitab4.5_0025697g0010 Nicotiana tabacum HOM05D005312 ORTHO05D006459 6.7e-136 488.0 372 71.0
Cpa.g.sc70.78 Carica papaya HOM05D005312 ORTHO05D006459 6.3e-134 481.5 443 62.1
QL02p069878 Quercus lobata HOM05D005312 ORTHO05D006459 7.7e-132 474.6 414 63.3
Prupe.3G312600 Prunus persica HOM05D005312 ORTHO05D006459 2.2e-131 473.0 446 59.6
COL.COLO4_13349 Corchorus olitorius HOM05D005312 ORTHO05D006459 2.5e-130 469.5 416 62.0
CSS0020784 Camellia sinensis var. sinensis HOM05D005312 ORTHO05D006459 4.2e-130 468.8 402 66.2
Cfa007172 Carpinus fangiana HOM05D005312 ORTHO05D006459 2.3e-128 463.0 437 61.8
MD09G1004000 Malus domestica HOM05D005312 ORTHO05D006459 3.0e-128 462.6 439 59.9
THA.LOC104805304 Tarenaya hassleriana HOM05D005312 ORTHO05D006459 3.0e-128 462.6 428 63.8
TAR629G1483 Trochodendron aralioides HOM05D005312 ORTHO05D006459 3.0e-128 462.6 436 61.9
MD17G1007700 Malus domestica HOM05D005312 ORTHO05D006459 3.9e-128 462.2 443 58.5
Ciclev10015374m.g Citrus clementina HOM05D005312 ORTHO05D006459 6.7e-128 461.5 438 58.4
TAR371G0255 Trochodendron aralioides HOM05D005312 ORTHO05D006459 6.7e-128 461.5 438 60.7
Duzib264G0870 Durio zibethinus HOM05D005312 ORTHO05D006459 1.1e-127 460.7 446 59.9
Thecc.04G046000 Theobroma cacao HOM05D005312 ORTHO05D006459 2.0e-127 459.9 413 60.3
CANSAT64G1152 Cannabis sativa HOM05D005312 ORTHO05D006459 3.3e-127 459.1 467 57.8
AT1G12850 Arabidopsis thaliana HOM05D005312 ORTHO05D006459 7.4e-127 458.0 424 60.4
Atru.chr6.2642 Acer truncatum HOM05D005312 ORTHO05D006459 1.7e-126 456.8 439 58.8
Sed0007531 Sechium edule HOM05D005312 ORTHO05D006459 1.7e-126 456.8 434 60.6
Nitab4.5_0002172g0150 Nicotiana tabacum HOM05D005312 ORTHO05D006459 2.8e-126 456.1 444 61.5
ClCG05G012720 Citrullus lanatus HOM05D005312 ORTHO05D006459 1.4e-125 453.8 439 59.5
Gohir.A07G232100 Gossypium hirsutum HOM05D005312 ORTHO05D006459 2.4e-125 453.0 405 60.7
Duzib187G0698 Durio zibethinus HOM05D005312 ORTHO05D006459 3.1e-125 452.6 441 58.5
TWI32G0425 Tripterygium wilfordii HOM05D005312 ORTHO05D006459 3.1e-125 452.6 400 62.5
Gohir.D07G239300 Gossypium hirsutum HOM05D005312 ORTHO05D006459 7.0e-125 451.4 405 60.2
Gorai.001G275400 Gossypium raimondii HOM05D005312 ORTHO05D006459 9.1e-125 451.1 444 57.9
Aa31LG2G5770 Aethionema arabicum HOM05D005312 ORTHO05D006459 1.2e-124 450.7 409 58.4
AL1G24500 Arabidopsis lyrata HOM05D005312 ORTHO05D006459 1.2e-124 450.7 420 60.2
FvH4_6g54210 Fragaria vesca HOM05D005312 ORTHO05D006459 1.2e-124 450.7 446 57.8
FAN09G1737 Fragaria x ananassa HOM05D005312 ORTHO05D006459 1.2e-124 450.7 446 57.8
FAN14G0182 Fragaria x ananassa HOM05D005312 ORTHO05D006459 1.2e-124 450.7 446 57.8
CiPaw.03G003000 Carya illinoinensis HOM05D005312 ORTHO05D006459 1.6e-124 450.3 436 61.0
Nn4g22171 Nelumbo nucifera HOM05D005312 ORTHO05D006459 1.6e-124 450.3 437 58.4
RcHm_v2.0_Chr2g0176401 Rosa chinensis HOM05D005312 ORTHO05D006459 1.6e-124 450.3 410 60.2
Lsat_1_v5_gn_2_94460 Lactuca sativa HOM05D005312 ORTHO05D006459 2.6e-124 449.5 421 59.9
Eucgr.G01940 Eucalyptus grandis HOM05D005312 ORTHO05D006459 4.5e-124 448.7 447 59.5
Duzib147G0684 Durio zibethinus HOM05D005312 ORTHO05D006459 5.9e-124 448.4 445 58.9
Glyma.16G146900 Glycine max HOM05D005312 ORTHO05D006459 1.0e-123 447.6 436 57.8
THA.LOC104823996 Tarenaya hassleriana HOM05D005312 ORTHO05D006459 1.0e-123 447.6 400 62.2
CARHR013180 Cardamine hirsuta HOM05D005312 ORTHO05D006459 3.8e-123 445.7 423 59.8
Manes.04G092300 Manihot esculenta HOM05D005312 ORTHO05D006459 3.8e-123 445.7 441 59.0
C02p53340 Brassica napus HOM05D005312 ORTHO05D006459 5.0e-123 445.3 389 61.2
BraA02t08484Z Brassica rapa HOM05D005312 ORTHO05D006459 5.0e-123 445.3 389 61.2
FAN02G3987 Fragaria x ananassa HOM05D005312 ORTHO05D006459 5.0e-123 445.3 446 57.0
BcaC03g17388 Brassica carinata HOM05D005312 ORTHO05D006459 6.5e-123 444.9 389 61.2
BolC2t11405H Brassica oleracea HOM05D005312 ORTHO05D006459 6.5e-123 444.9 389 61.2
FAN05G1132 Fragaria x ananassa HOM05D005312 ORTHO05D006459 6.5e-123 444.9 445 56.9
Psat1g097480 Pisum sativum HOM05D005312 ORTHO05D006459 6.5e-123 444.9 398 60.8
A02p34780 Brassica napus HOM05D005312 ORTHO05D006459 8.5e-123 444.5 389 61.4
HanXRQChr14g0451381 Helianthus annuus HOM05D005312 ORTHO05D006459 1.1e-122 444.1 413 59.8
Ah.02g128920 Amaranthus hybridus HOM05D005312 ORTHO05D006459 1.5e-122 443.7 441 56.7
Sabra14G0109800 Salix brachista HOM05D005312 ORTHO05D006459 2.5e-122 443.0 433 58.7
Sc03g0004830 Simmondsia chinensis HOM05D005312 ORTHO05D006459 2.5e-122 443.0 424 61.1
Manes.11G077500 Manihot esculenta HOM05D005312 ORTHO05D006459 1.2e-121 440.7 435 58.9
Thhalv10004350m.g Eutrema salsugineum HOM05D005312 ORTHO05D006459 1.6e-121 440.3 429 59.0
Carub.0001s1260 Capsella rubella HOM05D005312 ORTHO05D006459 2.7e-121 439.5 417 59.2
Sp2g15910 Schrenkiella parvula HOM05D005312 ORTHO05D006459 3.6e-121 439.1 387 62.5
Thhalv10007881m.g Eutrema salsugineum HOM05D005312 ORTHO05D006459 8.0e-121 438.0 420 59.5
Potri.014G145900 Populus trichocarpa HOM05D005312 ORTHO05D006459 8.0e-121 438.0 402 60.4
AT3G26780 Arabidopsis thaliana HOM05D005312 ORTHO05D006459 1.0e-120 437.6 427 58.5
Sp1g11430 Schrenkiella parvula HOM05D005312 ORTHO05D006459 1.8e-120 436.8 425 57.9
MELO3C014806.2 Cucumis melo HOM05D005312 ORTHO05D006459 2.3e-120 436.4 439 56.9
AL5G15650 Arabidopsis lyrata HOM05D005312 ORTHO05D006459 5.2e-120 435.3 424 58.3
Carub.0005s0483 Capsella rubella HOM05D005312 ORTHO05D006459 5.2e-120 435.3 399 59.4
Sabra02G0180200 Salix brachista HOM05D005312 ORTHO05D006459 5.2e-120 435.3 399 59.9
EL10As7g23753 Beta vulgaris HOM05D005312 ORTHO05D006459 2.0e-119 433.3 410 58.5
BcaB07g30210 Brassica carinata HOM05D005312 ORTHO05D006459 2.0e-119 433.3 398 61.1
A08p32570 Brassica napus HOM05D005312 ORTHO05D006459 2.0e-119 433.3 413 60.8
BcaB03g13161 Brassica carinata HOM05D005312 ORTHO05D006459 2.6e-119 433.0 417 61.2
Glyma.02G066000 Glycine max HOM05D005312 ORTHO05D006459 3.4e-119 432.6 441 56.9
Phvul.004G070300 Phaseolus vulgaris HOM05D005312 ORTHO05D006459 7.5e-119 431.4 442 56.8
Potri.002G236600 Populus trichocarpa HOM05D005312 ORTHO05D006459 1.7e-118 430.3 399 57.6
TPR.G36663 Trifolium pratense HOM05D005312 ORTHO05D006459 2.2e-118 429.9 405 58.0
BolC8t49199H Brassica oleracea HOM05D005312 ORTHO05D006459 6.3e-118 428.3 416 60.3
BraA08t35181Z Brassica rapa HOM05D005312 ORTHO05D006459 8.3e-118 427.9 413 60.8
Aqoxy5G03173 Aquilegia oxysepala HOM05D005312 ORTHO05D006459 1.4e-117 427.2 445 57.3
C08p15720 Brassica napus HOM05D005312 ORTHO05D006459 4.1e-117 425.6 416 60.1
CARHR147850 Cardamine hirsuta HOM05D005312 ORTHO05D006459 4.1e-117 425.6 412 60.2
Lalb_Chr06g0173771 Lupinus albus HOM05D005312 ORTHO05D006459 7.0e-117 424.9 439 55.8
Aa31LG1G1910 Aethionema arabicum HOM05D005312 ORTHO05D006459 2.0e-116 423.3 438 55.9
Medtr6g033275 Medicago truncatula HOM05D005312 ORTHO05D006459 2.0e-116 423.3 408 56.9
Lj2g0017210 Lotus japonicus HOM05D005312 ORTHO05D006459 7.7e-116 421.4 400 58.2
Lalb_Chr02g0156821 Lupinus albus HOM05D005312 ORTHO05D006459 6.5e-115 418.3 441 55.3
PSO017G1316 Papaver somniferum HOM05D005312 ORTHO05D006459 1.1e-114 417.5 411 58.4
Gohir.A10G070100 Gossypium hirsutum HOM05D005312 ORTHO05D006459 2.5e-114 416.4 420 54.0
PSO478G3188 Papaver somniferum HOM05D005312 ORTHO05D006459 3.2e-114 416.0 450 56.2
Gohir.D10G081000 Gossypium hirsutum HOM05D005312 ORTHO05D006459 7.2e-114 414.8 421 54.6
Gorai.011G088100 Gossypium raimondii HOM05D005312 ORTHO05D006459 1.2e-113 414.1 421 54.6
AUR62041074 Chenopodium quinoa HOM05D005312 ORTHO05D006459 1.6e-113 413.7 409 55.7
PGR083G1093 Punica granatum HOM05D005312 ORTHO05D006459 4.7e-113 412.1 443 55.3
MBI07_g40342_MAGBIO Magnolia biondii HOM05D005312 ORTHO05D006459 6.8e-112 408.3 387 57.6
arahy.Tifrunner.gnm1.ann1.ZY683S Arachis hypogaea HOM05D005312 ORTHO05D006459 8.8e-112 407.9 414 54.6
arahy.Tifrunner.gnm1.ann1.JN3C7K Arachis hypogaea HOM05D005312 ORTHO05D006459 9.8e-111 404.4 418 54.5
CDE02G3855 Ceratophyllum demersum HOM05D005312 ORTHO05D006459 3.3e-106 389.4 395 55.2
GSVIVG01033003001 Vitis vinifera HOM05D005312 ORTHO05D006459 2.8e-105 386.3 284 70.8
CDE06G1073 Ceratophyllum demersum HOM05D005312 ORTHO05D006459 5.2e-104 382.1 393 55.0
ATR0582G189 Amborella trichopoda HOM05D005312 ORTHO05D006459 4.5e-100 369.0 464 48.5
AUR62037835 Chenopodium quinoa HOM05D005312 ORTHO05D006459 5.8e-95 352.1 333 55.9
SEGI_01379 Sequoiadendron giganteum HOM05D005312 ORTHO05D006459 1.6e-92 344.0 403 48.9
Zm00001eb170350 Zea mays HOM05D005312 ORTHO05D006459 1.7e-91 340.5 388 50.0
Os11g0522000 Oryza sativa ssp. japonica HOM05D005312 ORTHO05D006459 8.0e-89 331.6 389 48.8
ECA238G3491 Erigeron canadensis HOM05D000001 ORTHO05D000003 4.4e-87 325.9 359 52.9
Ca_26608_v3 Cicer arietinum L. HOM05D005312 ORTHO05D006459 4.9e-70 269.2 415 41.7
ECA246G2144 Erigeron canadensis HOM05D005312 ORTHO05D006459 1.3e-65 254.6 224 58.5
Pp3c21_20660 Physcomitrium patens HOM05D005312 ORTHO05D006459 6.2e-65 252.3 394 40.1
unitig_37.g12041 Utricularia gibba HOM05D005312 ORTHO05D006459 8.1e-65 251.9 207 62.8
CSS0007293 Camellia sinensis var. sinensis HOM05D005312 ORTHO05D006459 1.1e-64 251.5 192 75.0
Actinidia19557 Actinidia chinensis HOM05D005312 ORTHO05D006459 9.9e-63 245.0 171 73.1
SEGI_20575 Sequoiadendron giganteum HOM05D005312 ORTHO05D006459 4.9e-62 242.7 302 48.3
VMungo0464G0174 Vigna mungo HOM05D005312 ORTHO05D006459 8.1e-57 225.3 240 53.8
unitig_37.g12040 Utricularia gibba HOM05D005312 ORTHO05D006459 2.9e-54 216.9 199 58.8
VMungo0464G1790 Vigna mungo HOM05D005312 ORTHO05D006459 1.9e-53 214.2 175 63.4
Haze_14938 Corylus avellana HOM05D005312 ORTHO05D006459 6.7e-51 205.7 195 65.1
HPP92_008243 Vanilla planifolia HOM05D005312 ORTHO05D006459 3.1e-48 196.8 241 47.7
Nn3g16305 Nelumbo nucifera HOM05D005312 ORTHO05D006459 1.1e-40 171.8 204 47.5
CBR_g2835 Chara braunii HOM05D005312 ORTHO05D006459 5.3e-40 169.5 369 34.1
AagrBONN_evm.TU.Sc2ySwM_344.1953 Anthoceros agrestis HOM05D005312 ORTHO05D006459 1.5e-39 167.9 290 34.8
SGA_v2.0_scaffold173G39196 Striga asiatica HOM05D005312 ORTHO05D006459 6.5e-22 109.4 115 56.5
SEGI_29311 Sequoiadendron giganteum HOM05D005312 ORTHO05D006459 1.7e-14 84.7 91 49.5
CARHR120940 Cardamine hirsuta HOM05D005312 ORTHO05D006459 4.2e-13 80.1 72 59.7
C05p10420 Brassica napus HOM05D005312 ORTHO05D006459 5.9e-07 59.7 36 63.9


User provided reference genes

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