Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu003330.1 Olea europaea HOM05D006127 ORTHO05D007465 7.6e-250 866.7 437 100.0
MSTRG.8699 Avicennia marina HOM05D006127 ORTHO05D007465 1.1e-166 590.5 418 70.6
CSS0002355 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 8.4e-164 580.9 414 69.1
Dinv35267 Davidia involucrata HOM05D006127 ORTHO05D007465 2.4e-163 579.3 411 69.6
CSS0021566 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 1.6e-162 576.6 420 68.1
Atru.chr1.338 Acer truncatum HOM05D006127 ORTHO05D007465 4.6e-162 575.1 414 68.6
Prupe.2G302400 Prunus persica HOM05D006127 ORTHO05D007465 4.3e-160 568.5 420 68.6
Gohir.D11G229300 Gossypium hirsutum HOM05D006127 ORTHO05D007465 1.3e-159 567.0 417 65.9
Gorai.003G069400 Gossypium raimondii HOM05D006127 ORTHO05D007465 4.8e-159 565.1 417 65.9
Ciclev10004691m.g Citrus clementina HOM05D006127 ORTHO05D007465 8.1e-159 564.3 412 67.5
Gohir.A11G225200 Gossypium hirsutum HOM05D006127 ORTHO05D007465 1.1e-158 563.9 417 66.2
Sabra17G0124200 Salix brachista HOM05D006127 ORTHO05D007465 1.5e-157 560.1 411 67.2
COL.COLO4_30292 Corchorus olitorius HOM05D006127 ORTHO05D007465 2.0e-157 559.7 413 66.3
QL09p012458 Quercus lobata HOM05D006127 ORTHO05D007465 2.0e-157 559.7 418 67.5
MD07G1280200 Malus domestica HOM05D006127 ORTHO05D007465 2.6e-157 559.3 420 66.2
Cfa016302 Carpinus fangiana HOM05D006127 ORTHO05D007465 9.9e-157 557.4 416 66.8
MD01G1210100 Malus domestica HOM05D006127 ORTHO05D007465 2.9e-156 555.8 442 63.8
Manes.06G153500 Manihot esculenta HOM05D006127 ORTHO05D007465 1.1e-155 553.9 415 66.3
Potri.017G148900 Populus trichocarpa HOM05D006127 ORTHO05D007465 1.9e-155 553.1 407 66.8
DCAR_008898 Daucus carota HOM05D006127 ORTHO05D007465 2.4e-155 552.7 413 67.1
Thecc.03G186000 Theobroma cacao HOM05D006127 ORTHO05D007465 1.6e-154 550.1 417 65.5
Actinidia34165 Actinidia chinensis HOM05D006127 ORTHO05D007465 2.7e-154 549.3 409 65.8
Solyc03g007620.3 Solanum lycopersicum HOM05D006127 ORTHO05D007465 6.0e-154 548.1 415 68.0
PGSC0003DMG400009503 Solanum tuberosum HOM05D006127 ORTHO05D007465 1.0e-153 547.4 415 67.7
Cc02_g02250 Coffea canephora HOM05D006127 ORTHO05D007465 1.3e-153 547.0 419 67.1
Potri.004G072100 Populus trichocarpa HOM05D006127 ORTHO05D007465 2.3e-153 546.2 411 66.2
Peaxi162Scf00444g00314 Petunia axillaris HOM05D006127 ORTHO05D007465 3.0e-153 545.8 415 67.7
Sopen03g003570 Solanum pennellii HOM05D006127 ORTHO05D007465 3.0e-153 545.8 415 67.7
Nitab4.5_0000472g0230 Nicotiana tabacum HOM05D006127 ORTHO05D007465 6.7e-153 544.7 415 67.5
ECA232G4568 Erigeron canadensis HOM05D006127 ORTHO05D007465 1.5e-152 543.5 415 64.8
CiPaw.05G261300 Carya illinoinensis HOM05D006127 ORTHO05D007465 5.6e-152 541.6 422 63.7
Migut.F00277 Erythranthe guttata HOM05D006127 ORTHO05D007465 7.4e-152 541.2 418 65.6
TWI23G0320 Tripterygium wilfordii HOM05D006127 ORTHO05D007465 1.6e-151 540.0 416 65.6
Lalb_Chr01g0009501 Lupinus albus HOM05D006127 ORTHO05D007465 2.8e-151 539.3 419 64.9
Ca_26803_v3 Cicer arietinum L. HOM05D006127 ORTHO05D007465 4.8e-151 538.5 419 64.9
CAN.G236.3 Capsicum annuum HOM05D006127 ORTHO05D007465 8.1e-151 537.7 415 67.2
PGR044G2596 Punica granatum HOM05D006127 ORTHO05D007465 1.4e-150 537.0 420 65.2
Lj2g0027649 Lotus japonicus HOM05D006127 ORTHO05D007465 2.4e-150 536.2 419 64.2
Nitab4.5_0001331g0020 Nicotiana tabacum HOM05D006127 ORTHO05D007465 2.4e-150 536.2 424 66.0
Lj1A1007G54 Lonicera japonica HOM05D006127 ORTHO05D007465 5.3e-150 535.0 425 64.7
Eucgr.A02719 Eucalyptus grandis HOM05D006127 ORTHO05D007465 6.9e-150 534.6 414 64.0
Glyma.09G129300 Glycine max HOM05D006127 ORTHO05D007465 1.2e-149 533.9 420 64.3
Dinv28380 Davidia involucrata HOM05D006127 ORTHO05D007465 2.6e-149 532.7 415 66.0
THA.LOC104818243 Tarenaya hassleriana HOM05D006127 ORTHO05D007465 1.7e-148 530.0 413 64.6
HanXRQChr00c0486g0575011 Helianthus annuus HOM05D006127 ORTHO05D007465 2.2e-148 529.6 416 63.7
FAN06G1782 Fragaria x ananassa HOM05D006127 ORTHO05D007465 2.9e-148 529.3 412 66.0
RcHm_v2.0_Chr1g0378611 Rosa chinensis HOM05D006127 ORTHO05D007465 2.9e-148 529.3 417 64.7
FAN03G2078 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.1e-147 527.3 412 65.5
FAN06G3350 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.4e-147 526.9 412 65.5
FAN10G2357 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.9e-147 526.6 412 65.5
FAN10G0315 Fragaria x ananassa HOM05D006127 ORTHO05D007465 3.2e-147 525.8 412 65.3
FAN03G3352 Fragaria x ananassa HOM05D006127 ORTHO05D007465 4.2e-147 525.4 412 65.3
TAR374G0777 Trochodendron aralioides HOM05D006127 ORTHO05D007465 9.3e-147 524.2 423 63.1
Thhalv10003967m.g Eutrema salsugineum HOM05D006127 ORTHO05D007465 1.2e-146 523.9 417 63.3
Phvul.004G105900 Phaseolus vulgaris HOM05D006127 ORTHO05D007465 2.1e-146 523.1 419 63.5
AL8G39630 Arabidopsis lyrata HOM05D006127 ORTHO05D007465 1.0e-145 520.8 411 63.7
CsaV3_5G001020 Cucumis sativus L. HOM05D006127 ORTHO05D007465 1.0e-145 520.8 437 60.9
Medtr6g053110 Medicago truncatula HOM05D006127 ORTHO05D007465 2.3e-145 519.6 413 64.2
AT5G62650 Arabidopsis thaliana HOM05D006127 ORTHO05D007465 8.7e-145 517.7 411 63.0
CiPaw.06G004100 Carya illinoinensis HOM05D006127 ORTHO05D007465 2.5e-144 516.2 411 64.5
Sc13g0009280 Simmondsia chinensis HOM05D006127 ORTHO05D007465 7.4e-144 514.6 418 62.7
Lsat_1_v5_gn_9_56840 Lactuca sativa HOM05D006127 ORTHO05D007465 2.1e-143 513.1 414 64.5
CARHR276460 Cardamine hirsuta HOM05D006127 ORTHO05D007465 2.8e-143 512.7 409 63.1
Carub.0008s2341 Capsella rubella HOM05D006127 ORTHO05D007465 8.2e-143 511.1 412 62.6
Gorai.006G199600 Gossypium raimondii HOM05D006127 ORTHO05D007465 1.8e-142 510.0 413 62.0
Sp2g25830 Schrenkiella parvula HOM05D006127 ORTHO05D007465 2.4e-142 509.6 410 61.5
MELO3C005842.2 Cucumis melo HOM05D006127 ORTHO05D007465 5.3e-142 508.4 416 61.8
SGA_v2.0_scaffold60G21123 Striga asiatica HOM05D006127 ORTHO05D007465 5.3e-142 508.4 418 62.0
Aa31LG11G990 Aethionema arabicum HOM05D006127 ORTHO05D007465 6.9e-142 508.1 416 62.5
PSO478G4852 Papaver somniferum HOM05D006127 ORTHO05D007465 2.0e-141 506.5 421 59.4
Gohir.D09G177600 Gossypium hirsutum HOM05D006127 ORTHO05D007465 7.6e-141 504.6 413 61.3
Sabra04G0047500 Salix brachista HOM05D006127 ORTHO05D007465 1.3e-140 503.8 461 57.3
ClCG01G000890 Citrullus lanatus HOM05D006127 ORTHO05D007465 3.8e-140 502.3 415 62.4
GSVIVG01028824001 Vitis vinifera HOM05D006127 ORTHO05D007465 1.1e-139 500.7 419 59.9
PSO266G0017 Papaver somniferum HOM05D006127 ORTHO05D007465 1.4e-139 500.4 421 57.7
Sed0008008 Sechium edule HOM05D006127 ORTHO05D007465 1.8e-137 493.4 416 60.1
arahy.Tifrunner.gnm1.ann1.AR9FJK Arachis hypogaea HOM05D006127 ORTHO05D007465 3.9e-137 492.3 426 61.0
Gohir.A09G182900 Gossypium hirsutum HOM05D006127 ORTHO05D007465 3.9e-137 492.3 395 62.5
BcaC01g02503 Brassica carinata HOM05D006127 ORTHO05D007465 5.1e-137 491.9 409 60.4
BraA06t25889Z Brassica rapa HOM05D006127 ORTHO05D007465 8.7e-137 491.1 409 60.1
Glyma.16G177100 Glycine max HOM05D006127 ORTHO05D007465 1.5e-136 490.3 412 62.4
arahy.Tifrunner.gnm1.ann1.HXNP43 Arachis hypogaea HOM05D006127 ORTHO05D007465 3.3e-136 489.2 419 61.6
A06p29390 Brassica napus HOM05D006127 ORTHO05D007465 3.3e-136 489.2 409 59.9
C03p64120 Brassica napus HOM05D006127 ORTHO05D007465 9.7e-136 487.6 409 59.9
BolC3t18667H Brassica oleracea HOM05D006127 ORTHO05D007465 9.7e-136 487.6 409 59.9
Aqoxy7G00200 Aquilegia oxysepala HOM05D006127 ORTHO05D007465 6.3e-135 485.0 399 61.2
HanXRQChr15g0494171 Helianthus annuus HOM05D006127 ORTHO05D007465 6.9e-134 481.5 412 60.7
Haze_00059 Corylus avellana HOM05D006127 ORTHO05D007465 2.0e-133 479.9 416 60.1
unitig_747.g21859 Utricularia gibba HOM05D006127 ORTHO05D007465 5.0e-132 475.3 419 59.7
BcaB02g09667 Brassica carinata HOM05D006127 ORTHO05D007465 3.6e-130 469.2 408 58.1
AUR62031438 Chenopodium quinoa HOM05D006127 ORTHO05D007465 2.3e-129 466.5 415 58.1
Nn6g32416 Nelumbo nucifera HOM05D006127 ORTHO05D007465 2.3e-129 466.5 446 55.8
Ah.13g069260 Amaranthus hybridus HOM05D006127 ORTHO05D007465 1.7e-127 460.3 414 57.0
Hund04798 Selenicereus undatus HOM05D006127 ORTHO05D007465 2.8e-127 459.5 463 53.6
EL10Ac3g05405 Beta vulgaris HOM05D006127 ORTHO05D007465 2.0e-125 453.4 415 57.3
vmacro06616 Vaccinium macrocarpon HOM05D006127 ORTHO05D007465 1.0e-121 441.0 415 55.9
ATR0721G168 Amborella trichopoda HOM05D006127 ORTHO05D007465 3.3e-120 436.0 404 55.7
Cpa.g.sc107.127 Carica papaya HOM05D006127 ORTHO05D007465 3.7e-119 432.6 313 68.7
Rhsim03G0192200 Rhododendron simsii HOM05D006127 ORTHO05D007465 1.8e-118 430.3 415 56.1
CDE04G3725 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 3.1e-118 429.5 409 53.3
Zm00001eb119480 Zea mays HOM05D006127 ORTHO05D007465 1.2e-117 427.6 403 54.3
AUR62021102 Chenopodium quinoa HOM05D006127 ORTHO05D007465 3.2e-115 419.5 375 57.6
Ah.07g206460 Amaranthus hybridus HOM05D006127 ORTHO05D007465 4.2e-115 419.1 405 54.6
TPR.G9177 Trifolium pratense HOM05D006127 ORTHO05D007465 4.8e-111 405.6 242 79.3
Psat0s2186g0040 Pisum sativum HOM05D006127 ORTHO05D007465 3.5e-109 399.4 240 79.2
HPP92_008801 Vanilla planifolia HOM05D006127 ORTHO05D007465 3.5e-109 399.4 407 50.6
FvH4_7g30450 Fragaria vesca HOM05D006127 ORTHO05D007465 5.2e-105 385.6 244 76.6
Oeu027861.1 Olea europaea HOM05D006127 ORTHO05D007465 3.6e-98 362.8 315 62.5
HPP92_005266 Vanilla planifolia HOM05D006127 ORTHO05D007465 1.3e-92 344.4 377 49.3
VMungo0464G0768 Vigna mungo HOM05D006127 ORTHO05D007465 9.5e-83 311.6 194 76.3
CDE03G0317 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 3.5e-77 293.1 257 55.3
Nn1g01683 Nelumbo nucifera HOM05D006127 ORTHO05D007465 2.5e-75 287.0 447 40.0
SGA_v2.0_scaffold192G40622 Striga asiatica HOM05D006127 ORTHO05D007465 4.3e-75 286.2 224 66.1
BcaB02g09671 Brassica carinata HOM05D006127 ORTHO05D007465 2.6e-72 276.9 409 43.0
Mapoly0009s0032 Marchantia polymorpha HOM05D006127 ORTHO05D007465 1.2e-61 241.5 435 34.9
Os01g0225300 Oryza sativa ssp. japonica HOM05D006127 ORTHO05D007465 2.3e-60 237.3 283 47.0
AagrBONN_evm.TU.Sc2ySwM_368.2100 Anthoceros agrestis HOM05D006127 ORTHO05D007465 8.6e-60 235.3 413 34.9
Pp3c17_22580 Physcomitrium patens HOM05D006127 ORTHO05D007465 2.4e-49 200.7 427 30.7
FAN01G1207 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.7e-47 194.5 121 77.7
arahy.Tifrunner.gnm1.ann1.KML1I1 Arachis hypogaea HOM05D006127 ORTHO05D007465 2.3e-44 184.1 245 44.5
SEGI_03634 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 2.0e-32 144.4 120 56.7
SMO266G0103 Selaginella moellendorffii HOM05D006127 ORTHO05D007465 5.8e-32 142.9 192 38.0
Cfa002216 Carpinus fangiana HOM05D006127 ORTHO05D007465 1.0e-31 142.1 241 38.6
AL8G39600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.2e-31 141.0 95 73.7
TPR.G27774 Trifolium pratense HOM05D006127 ORTHO05D007465 6.0e-29 132.9 179 46.9
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 7.6e-24 115.9 58 87.9
TPR.G9175 Trifolium pratense HOM05D006127 ORTHO05D007465 5.5e-22 109.8 80 62.5
Aqoxy1G04253 Aquilegia oxysepala HOM05D006127 ORTHO05D078839 3.2e-06 57.4 49 61.2


User provided reference genes

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