Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu003125.1 Olea europaea HOM05D005382 ORTHO05D006795 3.2e-142 508.4 266 100.0
Oeu051555.1 Olea europaea HOM05D005382 ORTHO05D006795 8.4e-74 281.2 157 94.9
MSTRG.22842 Avicennia marina HOM05D005382 ORTHO05D006795 3.1e-60 236.1 164 77.4
TWI12G1456 Tripterygium wilfordii HOM05D005382 ORTHO05D006795 3.1e-60 236.1 156 79.5
Manes.04G100900 Manihot esculenta HOM05D005382 ORTHO05D006795 1.5e-59 233.8 164 76.2
PGR102G0492 Punica granatum HOM05D005382 ORTHO05D006795 1.3e-58 230.7 176 72.2
MD17G1226400 Malus domestica HOM05D005382 ORTHO05D006795 1.7e-58 230.3 182 70.3
SalBow1G1272 Salvia bowleyana HOM05D005382 ORTHO05D006795 1.7e-58 230.3 180 72.2
QL05p036845 Quercus lobata HOM05D005382 ORTHO05D006795 2.9e-58 229.6 172 71.5
MSTRG.9395 Avicennia marina HOM05D005382 ORTHO05D006795 3.8e-58 229.2 178 72.5
Potri.001G041900 Populus trichocarpa HOM05D005382 ORTHO05D006795 3.8e-58 229.2 183 71.0
MD09G1227600 Malus domestica HOM05D005382 ORTHO05D006795 8.4e-58 228.0 182 69.2
Actinidia08935 Actinidia chinensis HOM05D005382 ORTHO05D006795 1.1e-57 227.6 177 72.9
Sabra03G0135500 Salix brachista HOM05D005382 ORTHO05D006795 1.4e-57 227.3 184 68.5
ECA247G2189 Erigeron canadensis HOM05D005382 ORTHO05D006795 2.4e-57 226.5 179 70.9
Hma1.2p1_0329F.1_g127290 Hydrangea macrophylla HOM05D005382 ORTHO05D006795 2.4e-57 226.5 166 74.1
Cfa001857 Carpinus fangiana HOM05D005382 ORTHO05D006795 4.2e-57 225.7 179 69.8
CiPaw.01G256500 Carya illinoinensis HOM05D005382 ORTHO05D006795 7.1e-57 224.9 178 68.5
DCAR_021374 Daucus carota HOM05D005382 ORTHO05D006795 7.1e-57 224.9 178 71.3
HanXRQChr04g0100021 Helianthus annuus HOM05D005382 ORTHO05D006795 7.1e-57 224.9 182 69.2
SGA_v2.0_scaffold515G52664 Striga asiatica HOM05D003096 ORTHO05D003521 7.1e-57 224.9 177 70.6
Manes.11G069200 Manihot esculenta HOM05D005382 ORTHO05D006795 1.2e-56 224.2 183 69.4
MSTRG.11221 Avicennia marina HOM05D005382 ORTHO05D006795 1.6e-56 223.8 165 73.3
Potri.003G184925 Populus trichocarpa HOM05D005382 ORTHO05D006795 1.6e-56 223.8 179 69.8
Thecc.06G046600 Theobroma cacao HOM05D005382 ORTHO05D006795 1.6e-56 223.8 176 68.8
TWI75G0559 Tripterygium wilfordii HOM05D005382 ORTHO05D006795 2.1e-56 223.4 162 72.8
Cc04_g05300 Coffea canephora HOM05D005382 ORTHO05D006795 2.7e-56 223.0 179 73.2
vmacro16842 Vaccinium macrocarpon HOM05D005382 ORTHO05D006795 2.7e-56 223.0 198 65.2
Ciclev10026461m.g Citrus clementina HOM05D005382 ORTHO05D006795 4.6e-56 222.2 175 70.9
Lsat_1_v5_gn_1_30801 Lactuca sativa HOM05D005382 ORTHO05D006795 4.6e-56 222.2 183 72.1
CAN.G1008.7 Capsicum annuum HOM05D005382 ORTHO05D006795 6.0e-56 221.9 176 68.8
Migut.I00626 Erythranthe guttata HOM05D005382 ORTHO05D006795 6.0e-56 221.9 168 74.4
Eucgr.J03130 Eucalyptus grandis HOM05D005382 ORTHO05D006795 6.0e-56 221.9 178 70.2
Sabra01G0028700 Salix brachista HOM05D005382 ORTHO05D006795 6.0e-56 221.9 185 68.1
HanXRQChr09g0274181 Helianthus annuus HOM05D005382 ORTHO05D006795 1.0e-55 221.1 183 71.6
Nitab4.5_0004738g0090 Nicotiana tabacum HOM05D005382 ORTHO05D006795 1.0e-55 221.1 177 70.1
COL.COLO4_26772 Corchorus olitorius HOM05D005382 ORTHO05D006795 2.3e-55 219.9 178 68.0
Eucgr.F03985 Eucalyptus grandis HOM05D005382 ORTHO05D006795 2.3e-55 219.9 164 74.4
Glyma.08G220400 Glycine max HOM05D005382 ORTHO05D006795 3.0e-55 219.5 178 69.1
ECA232G4196 Erigeron canadensis HOM05D005382 ORTHO05D006795 3.9e-55 219.2 176 68.2
Nitab4.5_0002700g0060 Nicotiana tabacum HOM05D005382 ORTHO05D006795 5.1e-55 218.8 177 69.5
Lsat_1_v5_gn_4_85061 Lactuca sativa HOM05D005382 ORTHO05D006795 6.7e-55 218.4 142 83.1
Prupe.3G103600 Prunus persica HOM05D005382 ORTHO05D006795 1.1e-54 217.6 139 80.6
Rhsim08G0203100 Rhododendron simsii HOM05D005382 ORTHO05D006795 1.5e-54 217.2 168 71.4
Gorai.007G085500 Gossypium raimondii HOM05D005382 ORTHO05D006795 1.9e-54 216.9 172 68.0
Gohir.A11G075200 Gossypium hirsutum HOM05D005382 ORTHO05D006795 5.6e-54 215.3 172 67.4
SGA_v2.0_scaffold74G24593 Striga asiatica HOM05D005382 ORTHO05D006795 9.6e-54 214.5 160 70.0
Duzib235G0288 Durio zibethinus HOM05D005382 ORTHO05D006795 1.3e-53 214.2 159 73.0
FAN05G5289 Fragaria x ananassa HOM05D005382 ORTHO05D006795 1.3e-53 214.2 167 71.9
Haze_16689 Corylus avellana HOM05D005382 ORTHO05D006795 1.6e-53 213.8 151 73.5
FAN02G4537 Fragaria x ananassa HOM05D005382 ORTHO05D006795 1.6e-53 213.8 167 71.9
Rhsim12G0185400 Rhododendron simsii HOM05D005382 ORTHO05D006795 2.1e-53 213.4 179 69.8
FAN09G0036 Fragaria x ananassa HOM05D005382 ORTHO05D006795 2.8e-53 213.0 166 71.1
Lj5A81T85 Lonicera japonica HOM05D005382 ORTHO05D006795 3.7e-53 212.6 146 76.0
TAR625G1145 Trochodendron aralioides HOM05D005382 ORTHO05D006795 3.7e-53 212.6 186 65.6
GSVIVG01016103001 Vitis vinifera HOM05D005382 ORTHO05D006795 3.7e-53 212.6 172 67.4
FvH4_6g28270 Fragaria vesca HOM05D005382 ORTHO05D006795 4.8e-53 212.2 167 71.3
CSS0039254 Camellia sinensis var. sinensis HOM05D005382 ORTHO05D006795 6.2e-53 211.8 197 62.9
Glyma.07G021400 Glycine max HOM05D005382 ORTHO05D006795 6.2e-53 211.8 139 79.9
EL10Ac8g19398 Beta vulgaris HOM05D005382 ORTHO05D006795 1.1e-52 211.1 158 73.4
CiPaw.02G163400 Carya illinoinensis HOM05D005382 ORTHO05D006795 1.1e-52 211.1 178 64.6
Duzib192G0805 Durio zibethinus HOM05D005382 ORTHO05D006795 1.1e-52 211.1 159 72.3
VMungo0647G2390 Vigna mungo HOM05D005382 ORTHO05D006795 1.1e-52 211.1 139 79.9
Phvul.008G253200 Phaseolus vulgaris HOM05D005382 ORTHO05D006795 1.8e-52 210.3 180 65.0
PSO782G0145 Papaver somniferum HOM05D005382 ORTHO05D006795 2.4e-52 209.9 172 69.2
Sed0008280 Sechium edule HOM05D005382 ORTHO05D006795 2.4e-52 209.9 180 64.4
Medtr4g007700 Medicago truncatula HOM05D005382 ORTHO05D006795 5.3e-52 208.8 167 69.5
RcHm_v2.0_Chr2g0132311 Rosa chinensis HOM05D005382 ORTHO05D006795 5.3e-52 208.8 167 70.7
AUR62034069 Chenopodium quinoa HOM05D007611 ORTHO05D006795 1.5e-51 207.2 162 69.8
ClCG09G003490 Citrullus lanatus HOM05D005382 ORTHO05D006795 2.6e-51 206.5 181 66.3
Peaxi162Scf00314g01032 Petunia axillaris HOM05D005382 ORTHO05D006795 2.6e-51 206.5 185 63.2
THA.LOC104808172 Tarenaya hassleriana HOM05D005382 ORTHO05D006795 2.6e-51 206.5 161 72.0
Lj3g0027435 Lotus japonicus HOM05D005382 ORTHO05D006795 3.4e-51 206.1 163 71.2
Lalb_Chr25g0278731 Lupinus albus HOM05D005382 ORTHO05D006795 5.8e-51 205.3 172 65.7
Sc12g0008250 Simmondsia chinensis HOM05D005382 ORTHO05D006795 5.8e-51 205.3 179 64.8
Nn8g40079 Nelumbo nucifera HOM05D005382 ORTHO05D006795 7.6e-51 204.9 177 66.1
Sopen03g036580 Solanum pennellii HOM05D005382 ORTHO05D006795 7.6e-51 204.9 178 64.6
Aa31LG4G1250 Aethionema arabicum HOM05D005382 ORTHO05D006795 9.9e-51 204.5 179 64.8
PSO063G0682 Papaver somniferum HOM05D005382 ORTHO05D006795 1.3e-50 204.1 172 68.0
CsaV3_7G031710 Cucumis sativus L. HOM05D005382 ORTHO05D006795 2.2e-50 203.4 181 65.7
AUR62032996 Chenopodium quinoa HOM05D005382 ORTHO05D006795 2.9e-50 203.0 159 70.4
MELO3C023486.2 Cucumis melo HOM05D005382 ORTHO05D006795 2.9e-50 203.0 234 54.7
Thhalv10019121m.g Eutrema salsugineum HOM05D005382 ORTHO05D006795 3.8e-50 202.6 162 71.6
Dinv21426 Davidia involucrata HOM05D005382 ORTHO05D006795 4.9e-50 202.2 178 66.9
PGSC0003DMG400014155 Solanum tuberosum HOM05D005382 ORTHO05D006795 4.9e-50 202.2 137 76.6
CARHR073510 Cardamine hirsuta HOM05D005382 ORTHO05D006795 6.4e-50 201.8 205 57.6
BcaNung04166 Brassica carinata HOM05D005382 ORTHO05D006795 1.4e-49 200.7 141 75.9
BcaB02g07237 Brassica carinata HOM05D005382 ORTHO05D006795 2.4e-49 199.9 183 65.0
Nn8g40087 Nelumbo nucifera HOM05D005382 ORTHO05D006795 2.4e-49 199.9 176 65.3
Zm00001eb257680 Zea mays HOM05D005382 ORTHO05D006795 4.2e-49 199.1 135 74.8
A07p26960 Brassica napus HOM05D005382 ORTHO05D006795 7.1e-49 198.4 173 64.7
BraA07t30340Z Brassica rapa HOM05D005382 ORTHO05D006795 7.1e-49 198.4 173 64.7
Solyc03g117670.4 Solanum lycopersicum HOM05D005382 ORTHO05D006795 7.1e-49 198.4 178 62.9
AT1G80940 Arabidopsis thaliana HOM05D005382 ORTHO05D006795 9.3e-49 198.0 181 63.5
A07p44750 Brassica napus HOM05D005382 ORTHO05D006795 1.2e-48 197.6 163 66.9
BraA07t31983Z Brassica rapa HOM05D005382 ORTHO05D006795 1.2e-48 197.6 163 66.9
Gohir.D11G079900 Gossypium hirsutum HOM05D005382 ORTHO05D006795 1.6e-48 197.2 155 68.4
AL2G40440 Arabidopsis lyrata HOM05D005382 ORTHO05D006795 2.1e-48 196.8 187 62.0
C06p29630 Brassica napus HOM05D005382 ORTHO05D006795 2.1e-48 196.8 192 60.9
BolC6t38128H Brassica oleracea HOM05D005382 ORTHO05D006795 2.1e-48 196.8 192 60.9
C06p53570 Brassica napus HOM05D005382 ORTHO05D006795 2.7e-48 196.4 173 63.6
Sp5g34800 Schrenkiella parvula HOM05D005382 ORTHO05D006795 3.5e-48 196.1 163 66.3
BcaC08g47533 Brassica carinata HOM05D005382 ORTHO05D006795 6.0e-48 195.3 188 62.2
BolC6t40373H Brassica oleracea HOM05D005382 ORTHO05D006795 6.0e-48 195.3 188 62.2
Carub.0002s2660 Capsella rubella HOM05D005382 ORTHO05D006795 6.0e-48 195.3 181 63.0
Os02g0793900 Oryza sativa ssp. japonica HOM05D005382 ORTHO05D006795 6.0e-48 195.3 187 58.8
BcaB02g08711 Brassica carinata HOM05D005382 ORTHO05D006795 7.9e-48 194.9 193 62.7
Lalb_Chr01g0011991 Lupinus albus HOM05D005382 ORTHO05D006795 7.9e-48 194.9 167 64.1
CDE04G1090 Ceratophyllum demersum HOM05D005382 ORTHO05D006795 1.8e-47 193.7 168 65.5
MBI15_g08404_MAGBIO Magnolia biondii HOM05D005382 ORTHO05D006795 1.8e-47 193.7 193 57.0
FAN14G0578 Fragaria x ananassa HOM05D005382 ORTHO05D006795 3.9e-47 192.6 143 74.1
CDE07G1687 Ceratophyllum demersum HOM05D005382 ORTHO05D006795 1.1e-46 191.0 140 72.9
ATR0580G392 Amborella trichopoda HOM05D005382 ORTHO05D006795 1.3e-45 187.6 159 68.6
TPR.G3367 Trifolium pratense HOM05D005382 ORTHO05D006795 2.1e-45 186.8 154 68.8
Psat7g262200 Pisum sativum HOM05D005382 ORTHO05D006795 5.3e-44 182.2 153 67.3
Cpa.g.c28380.1 Carica papaya HOM05D005382 ORTHO05D006795 3.4e-43 179.5 138 70.3
HPP92_010348 Vanilla planifolia HOM05D005382 ORTHO05D006795 2.2e-42 176.8 160 60.0
CANSAT56G2690 Cannabis sativa HOM05D005382 ORTHO05D006795 2.5e-41 173.3 168 60.1
Mapoly0128s0009 Marchantia polymorpha HOM05D005382 ORTHO05D006795 5.5e-41 172.2 148 64.2
SMO145G0139 Selaginella moellendorffii HOM05D005382 ORTHO05D006795 5.5e-41 172.2 133 63.9
SEGI_41275 Sequoiadendron giganteum HOM05D005382 ORTHO05D006795 9.3e-41 171.4 129 68.2
arahy.Tifrunner.gnm1.ann1.HUQR60 Arachis hypogaea HOM05D005382 ORTHO05D006795 1.0e-39 167.9 173 59.0
arahy.Tifrunner.gnm1.ann1.7IZ6IW Arachis hypogaea HOM05D005382 ORTHO05D006795 1.3e-39 167.5 173 59.0
Pp3c16_25700 Physcomitrium patens HOM05D005382 ORTHO05D006795 1.9e-38 163.7 132 64.4
Pp3c25_9780 Physcomitrium patens HOM05D005382 ORTHO05D006795 5.7e-38 162.2 134 64.2
Ah.14g085670 Amaranthus hybridus HOM05D005382 ORTHO05D006795 6.9e-36 155.2 180 53.9
SEGI_02613 Sequoiadendron giganteum HOM05D005382 ORTHO05D006795 2.1e-32 143.7 120 61.7
CSS0015514 Camellia sinensis var. sinensis HOM05D005382 ORTHO05D006795 9.1e-28 128.3 127 59.1
Hund12559 Selenicereus undatus HOM05D005382 ORTHO05D006795 9.4e-25 118.2 90 71.1
unitig_22.g6275 Utricularia gibba HOM05D005382 ORTHO05D006795 2.3e-23 113.6 77 77.9
Atru.chr1.2804_Atru.chr1.2805 Acer truncatum HOM05D005382 ORTHO05D006795 3.3e-22 109.8 164 48.2
Actinidia36864 Actinidia chinensis HOM05D005382 ORTHO05D006795 4.4e-22 109.4 167 46.1
BcaB07g33703 Brassica carinata HOM05D005382 ORTHO05D006795 5.7e-22 109.0 73 79.5
BcaB07g33704 Brassica carinata HOM05D005382 ORTHO05D006795 1.7e-18 97.4 63 81.0
BcaB07g33705 Brassica carinata HOM05D005382 ORTHO05D006795 1.7e-18 97.4 63 81.0
Actinidia26580 Actinidia chinensis HOM05D005382 ORTHO05D006795 1.9e-17 94.0 70 72.9
AagrBONN_evm.TU.Sc2ySwM_117.2014 Anthoceros agrestis HOM05D005382 ORTHO05D006795 3.6e-16 89.7 72 66.7
TPR.G1583 Trifolium pratense HOM05D005382 ORTHO05D006795 2.7e-08 63.5 45 71.1


User provided reference genes

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