Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu003015.1 Olea europaea HOM05D000002 ORTHO05D004433 1.3e-85 319.7 161 100.0
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-53 213.4 162 61.1
ECA247G3536 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.1e-52 207.6 160 62.5
MD01G1096700 Malus domestica HOM05D000002 ORTHO05D000001 2.1e-51 206.1 162 59.9
ECA233G1874 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.5e-51 205.3 162 59.3
ECA233G2777 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.5e-51 205.3 159 59.7
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 3.5e-51 205.3 162 59.9
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-50 203.8 162 59.3
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-50 203.8 162 59.9
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-50 203.8 161 62.1
SHI44323 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-50 203.4 162 60.5
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-50 203.4 162 59.9
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 1.8e-50 203.0 161 60.2
ECA240G4274 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-50 202.6 162 58.0
SHI04168 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-50 202.6 162 59.9
ECA248G0687 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.1e-50 201.4 161 60.2
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.7e-50 200.7 162 58.6
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.1e-49 200.3 161 59.0
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-49 198.7 162 58.0
ECA238G3349 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.6e-49 198.0 161 57.8
SHI38827 Sapria himalayana HOM05D000002 ORTHO05D004433 5.6e-49 198.0 162 58.6
ECA248G3794 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.4e-49 197.6 162 58.6
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-48 196.1 161 57.8
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-48 196.1 162 59.3
ECA248G0669 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-47 193.4 162 57.4
Ah.01g008310 Amaranthus hybridus HOM05D000002 ORTHO05D004433 6.4e-45 184.5 159 52.8
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.4e-44 182.6 159 52.2
Ah.16g108610 Amaranthus hybridus HOM05D000002 ORTHO05D004433 3.2e-44 182.2 156 53.8
ECA233G2147 Erigeron canadensis HOM05D000509 ORTHO05D004433 1.2e-43 180.3 155 57.4
Oeu012846.1 Olea europaea HOM05D003971 ORTHO05D004433 1.2e-43 180.3 119 76.5
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 3.5e-43 178.7 138 59.4
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.0e-42 177.2 159 50.9
Oeu035997.1 Olea europaea HOM05D000002 ORTHO05D004433 1.0e-42 177.2 121 77.7
SHI05549 Sapria himalayana HOM05D000002 ORTHO05D004433 3.9e-42 175.3 138 63.8
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 7.4e-41 171.0 162 53.7
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 3.7e-40 168.7 162 51.9
Oeu026048.1 Olea europaea HOM05D000002 ORTHO05D000001 8.2e-40 167.5 130 62.3
SHI21269 Sapria himalayana HOM05D000002 ORTHO05D004433 3.1e-39 165.6 162 51.9
PSO675G3339 Papaver somniferum HOM05D000002 ORTHO05D004433 4.0e-39 165.2 159 49.7
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 4.0e-39 165.2 162 51.2
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 5.3e-39 164.9 162 50.6
SHI12756 Sapria himalayana HOM05D000002 ORTHO05D004433 2.0e-38 162.9 154 54.5
Nn4g23986 Nelumbo nucifera HOM05D000002 ORTHO05D000001 7.6e-38 161.0 162 48.1
Oeu034209.1 Olea europaea HOM05D000002 ORTHO05D004433 7.6e-38 161.0 97 82.5
ECA234G3041 Erigeron canadensis HOM05D001549 ORTHO05D003098 5.5e-36 154.8 159 47.8
Nn1g02545 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.7e-35 152.5 143 49.0
RcHm_v2.0_Chr3g0481931 Rosa chinensis HOM05D000002 ORTHO05D000001 6.0e-35 151.4 160 49.4
SHI03937 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-34 149.4 162 48.1
Nn8g39416 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.7e-34 147.9 162 45.7
FvH4_5g31431 Fragaria vesca HOM05D000002 ORTHO05D004433 1.1e-33 147.1 160 48.1
ECA246G0537 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-33 145.2 161 46.6
Sopen05g027370 Solanum pennellii HOM05D000002 ORTHO05D004433 9.7e-33 144.1 119 56.3
ECA246G2496 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.7e-32 142.1 113 59.3
Oeu050054.1 Olea europaea HOM05D000002 ORTHO05D004433 3.7e-32 142.1 123 63.4
Oeu033717.1 Olea europaea HOM05D000002 ORTHO05D004433 6.3e-32 141.4 102 70.6
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-31 139.0 158 47.5
Oeu022773.1 Olea europaea HOM05D000002 ORTHO05D004433 4.1e-31 138.7 92 76.1
Cc04_g10140 Coffea canephora HOM05D000002 ORTHO05D004433 9.0e-31 137.5 163 45.4
Oeu034487.1 Olea europaea HOM05D000002 ORTHO05D004433 5.9e-30 134.8 89 77.5
Oeu055579.1 Olea europaea HOM05D000002 ORTHO05D004433 1.7e-29 133.3 92 73.9
Nn1g09492 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.1e-28 130.6 162 40.7
CSS0021348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 1.9e-28 129.8 95 66.3
Oeu001115.1 Olea europaea HOM05D000002 ORTHO05D004433 1.9e-28 129.8 83 75.9
SHI47859 Sapria himalayana HOM05D000002 ORTHO05D004433 5.5e-28 128.3 104 58.7
Nn1g01470 Nelumbo nucifera HOM05D000002 ORTHO05D004433 6.1e-27 124.8 136 48.5
Sopen12g018110 Solanum pennellii HOM05D000004 ORTHO05D000002 6.1e-27 124.8 130 46.2
Nn5g27722 Nelumbo nucifera HOM05D000002 ORTHO05D004433 7.9e-27 124.4 126 46.8
SHI18909 Sapria himalayana HOM05D000002 ORTHO05D004433 8.8e-26 120.9 96 58.3
ECA238G4719 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.4e-25 117.9 161 40.4
SHI10489 Sapria himalayana HOM05D000002 ORTHO05D004433 1.4e-23 113.6 81 66.7
Sopen03g008290 Solanum pennellii HOM05D000002 ORTHO05D004433 1.4e-23 113.6 122 43.4
Cc05_g05430 Coffea canephora HOM05D000002 ORTHO05D004433 9.1e-23 110.9 130 43.8
Sopen09g028980 Solanum pennellii HOM05D000002 ORTHO05D004433 9.1e-23 110.9 94 45.7
Sopen02g016810 Solanum pennellii HOM05D008571 ORTHO05D004433 1.2e-22 110.5 160 38.1
Ah.04g159010 Amaranthus hybridus HOM05D000002 ORTHO05D004433 3.4e-22 109.0 80 60.0
Sopen09g027930 Solanum pennellii HOM05D000002 ORTHO05D004433 7.7e-22 107.8 143 36.4
CSS0046925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 1.0e-21 107.5 96 56.2
SHI43075 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-21 107.5 89 57.3
BolC8t49584H Brassica oleracea HOM05D000002 ORTHO05D004433 2.9e-21 105.9 160 35.0
SHI32919 Sapria himalayana HOM05D000002 ORTHO05D004433 5.0e-21 105.1 78 64.1
Nn8g40101 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.4e-20 103.6 113 46.0
SHI45691 Sapria himalayana HOM05D000002 ORTHO05D004433 7.2e-20 101.3 78 62.8
PGSC0003DMG400023646 Solanum tuberosum HOM05D000002 ORTHO05D004433 9.4e-20 100.9 92 48.9
Sopen03g027090 Solanum pennellii HOM05D000002 ORTHO05D002065 1.2e-19 100.5 138 38.4
Sopen12g010550 Solanum pennellii HOM05D008571 ORTHO05D011280 1.6e-19 100.1 125 40.0
SHI43060 Sapria himalayana HOM05D000002 ORTHO05D004433 2.1e-19 99.8 76 61.8
Ah.16g106880 Amaranthus hybridus HOM05D000002 ORTHO05D004433 3.6e-19 99.0 80 53.8
SHI32313 Sapria himalayana HOM05D000002 ORTHO05D004433 4.7e-19 98.6 73 63.0
SHI03641 Sapria himalayana HOM05D000002 ORTHO05D004433 7.9e-19 97.8 73 61.6
ECA246G4710 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-18 97.4 75 61.3
ECA247G2369 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-18 97.4 113 46.0
SHI18394 Sapria himalayana HOM05D000002 ORTHO05D004433 1.0e-18 97.4 75 60.0
Ah.03g145180 Amaranthus hybridus HOM05D000002 ORTHO05D004433 1.8e-18 96.7 77 55.8
CSS0020823 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-18 96.7 141 37.6
Nn2g15808 Nelumbo nucifera HOM05D000006 ORTHO05D004433 3.0e-18 95.9 117 41.9
SHI45690 Sapria himalayana HOM05D000002 ORTHO05D000001 3.9e-18 95.5 78 55.1
SHI18424 Sapria himalayana HOM05D000002 ORTHO05D004433 5.1e-18 95.1 78 55.1
ECA233G2319 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.8e-18 94.4 75 57.3
Nn5g30038 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.1e-17 94.0 91 47.3
SHI27796 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-17 94.0 78 53.8
SHI32918 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-17 94.0 75 56.0
Sopen00g007880 Solanum pennellii HOM05D000002 ORTHO05D004433 1.1e-17 94.0 79 59.5
Dinv02177 Davidia involucrata HOM05D000002 ORTHO05D004433 1.5e-17 93.6 72 59.7
ECA240G3347 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-17 93.6 72 63.9
Thhalv10019725m.g Eutrema salsugineum HOM05D000002 ORTHO05D004433 1.5e-17 93.6 113 40.7
SHI02070 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-17 93.6 78 53.8
SHI39436 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-17 93.6 78 53.8
SHI39438 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-17 93.6 78 53.8
SHI47495 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-17 93.6 75 56.0
Nn1g07613 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.0e-17 93.2 75 58.7
Gohir.D10G094150 Gossypium hirsutum HOM05D000002 ORTHO05D004433 2.6e-17 92.8 80 55.0
Nn4g25779 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.6e-17 92.8 130 35.4
SHI10030 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-17 92.0 78 52.6
Nn2g13681 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.8e-16 89.4 68 63.2
Oeu006707.1 Olea europaea HOM05D000002 ORTHO05D004433 3.7e-16 89.0 78 52.6
TAR009G0003 Trochodendron aralioides HOM05D008571 ORTHO05D004433 4.8e-16 88.6 88 51.1
SHI43061 Sapria himalayana HOM05D000002 ORTHO05D004433 8.2e-16 87.8 75 53.3
Nn2g15606 Nelumbo nucifera HOM05D000006 ORTHO05D004433 1.1e-15 87.4 120 39.2
Gohir.D08G274150 Gossypium hirsutum HOM05D000002 ORTHO05D004433 1.4e-15 87.0 82 46.3
Gorai.004G292700 Gossypium raimondii HOM05D000002 ORTHO05D004433 1.4e-15 87.0 82 46.3
CsaV3_6G015590 Cucumis sativus L. HOM05D000002 ORTHO05D004433 1.8e-15 86.7 160 35.6
MD14G1034300 Malus domestica HOM05D000038 ORTHO05D004433 1.8e-15 86.7 67 59.7
Nn8g40511 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.1e-15 85.5 163 29.4
PGSC0003DMG400033163 Solanum tuberosum HOM05D000002 ORTHO05D004433 4.1e-15 85.5 69 44.9
SHI10488 Sapria himalayana HOM05D000002 ORTHO05D000001 9.1e-15 84.3 66 57.6
SHI00405 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-14 84.0 72 52.8
Sopen03g007650 Solanum pennellii HOM05D000002 ORTHO05D004433 1.5e-14 83.6 95 43.2
Glyma.07G117100 Glycine max HOM05D000002 ORTHO05D004433 7.7e-14 81.3 65 55.4
QL05p063530 Quercus lobata HOM05D000002 ORTHO05D004433 1.3e-13 80.5 67 50.7
PGSC0003DMG400001585 Solanum tuberosum HOM05D000002 ORTHO05D004433 1.3e-13 80.5 72 52.8
Oeu051241.1 Olea europaea HOM05D000002 ORTHO05D004433 3.8e-13 79.0 57 68.4
Dinv02026 Davidia involucrata HOM05D028709 ORTHO05D004433 6.5e-13 78.2 72 47.2
SHI09919 Sapria himalayana HOM05D000002 ORTHO05D004433 6.5e-13 78.2 50 74.0
SHI37107 Sapria himalayana HOM05D000002 ORTHO05D004433 6.5e-13 78.2 63 58.7
Sopen12g018200 Solanum pennellii HOM05D000014 ORTHO05D004433 1.4e-12 77.0 130 34.6
Sopen11g022850 Solanum pennellii HOM05D000002 ORTHO05D004433 1.9e-12 76.6 66 42.4
Nn1g03239 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.5e-12 76.3 123 37.4
CAN.G401.9 Capsicum annuum HOM05D000002 ORTHO05D004433 5.5e-12 75.1 65 55.4
Thhalv10000559m.g Eutrema salsugineum HOM05D008571 ORTHO05D004433 5.5e-12 75.1 82 43.9
Oeu030662.1 Olea europaea HOM05D000002 ORTHO05D004433 9.4e-12 74.3 43 83.7
Sopen05g008270 Solanum pennellii HOM05D000006 ORTHO05D000695 1.2e-11 73.9 108 38.0
Sopen11g022370 Solanum pennellii HOM05D000036 ORTHO05D005472 1.6e-11 73.6 89 42.7
SHI18425 Sapria himalayana HOM05D000002 ORTHO05D004433 2.1e-11 73.2 57 59.6
MD01G1222200 Malus domestica HOM05D000002 ORTHO05D004433 2.7e-11 72.8 101 37.6
SHI00406 Sapria himalayana HOM05D000002 ORTHO05D004433 2.7e-11 72.8 57 57.9
SHI03826 Sapria himalayana HOM05D000002 ORTHO05D004433 2.7e-11 72.8 62 53.2
CiPaw.08G098800 Carya illinoinensis HOM05D000002 ORTHO05D004433 3.6e-11 72.4 107 37.4
Nn3g20325 Nelumbo nucifera HOM05D008571 ORTHO05D004433 3.6e-11 72.4 69 50.7
CSS0010788 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 6.1e-11 71.6 54 55.6
SHI07420 Sapria himalayana HOM05D000002 ORTHO05D004433 8.0e-11 71.2 65 52.3
SHI10029 Sapria himalayana HOM05D000002 ORTHO05D004433 8.0e-11 71.2 57 56.1
SHI22389 Sapria himalayana HOM05D000002 ORTHO05D004433 1.0e-10 70.9 74 48.6
Sopen09g011970 Solanum pennellii HOM05D008571 ORTHO05D011280 1.4e-10 70.5 126 32.5
Oeu044197.1 Olea europaea HOM05D000002 ORTHO05D004433 1.8e-10 70.1 43 76.7
SHI17056 Sapria himalayana HOM05D000105 ORTHO05D004433 5.2e-10 68.6 65 46.2
Nn1g02075 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.5e-09 67.0 69 40.6
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.0e-09 66.6 157 29.3
ECA232G4651 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-09 66.6 145 31.7
Oeu046444.1 Olea europaea HOM05D000002 ORTHO05D004433 3.3e-09 65.9 37 86.5
SHI09918 Sapria himalayana HOM05D000002 ORTHO05D004433 3.3e-09 65.9 51 58.8
CSS0036927 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 4.4e-09 65.5 76 46.1
Sed0004206 Sechium edule HOM05D000002 ORTHO05D004433 4.4e-09 65.5 43 67.4
Thecc.03G106900 Theobroma cacao HOM05D000002 ORTHO05D004433 5.7e-09 65.1 69 40.6
Nn1g06847 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.7e-08 63.5 68 45.6
Cpa.g.sc11.103 Carica papaya HOM05D000002 ORTHO05D004433 2.8e-08 62.8 82 32.9
Prupe.7G032100 Prunus persica HOM05D000002 ORTHO05D004433 3.7e-08 62.4 55 50.9
Sp6g08170 Schrenkiella parvula HOM05D002833 ORTHO05D003210 4.8e-08 62.0 150 32.0
Nn3g20324 Nelumbo nucifera HOM05D000002 ORTHO05D004433 6.3e-08 61.6 68 39.7
Glyma.01G070601 Glycine max HOM05D000002 ORTHO05D004433 1.4e-07 60.5 74 39.2
Oeu010596.1 Olea europaea HOM05D000002 ORTHO05D004433 1.8e-07 60.1 42 69.0
CAN.G1829.1 Capsicum annuum HOM05D000583 ORTHO05D004433 3.1e-07 59.3 58 43.1
Thhalv10001107m.g Eutrema salsugineum HOM05D002833 ORTHO05D003210 3.1e-07 59.3 135 30.4
Oeu060033.1 Olea europaea HOM05D000784 ORTHO05D000116 3.1e-07 59.3 40 65.0
Lsat_1_v5_gn_4_123500 Lactuca sativa HOM05D000002 ORTHO05D004433 4.1e-07 58.9 54 50.0
SEGI_22676 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 4.1e-07 58.9 156 25.0
Sp4g03150 Schrenkiella parvula HOM05D002833 ORTHO05D003210 9.1e-07 57.8 125 31.2
PGR083G0316 Punica granatum HOM05D000002 ORTHO05D000047 2.0e-06 56.6 154 29.2
ECA246G2299 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.6e-06 56.2 120 28.3
PGSC0003DMG400040582 Solanum tuberosum HOM05D008571 ORTHO05D011280 2.6e-06 56.2 59 42.4
SGA_v2.0_scaffold2G01302 Striga asiatica HOM05D000033 ORTHO05D001614 2.6e-06 56.2 116 25.9
SHI29049 Sapria himalayana HOM05D000002 ORTHO05D004433 3.5e-06 55.8 58 46.6
A06p17280 Brassica napus HOM05D000002 ORTHO05D000047 4.5e-06 55.5 108 26.9
RcHm_v2.0_Chr3g0482021 Rosa chinensis HOM05D000002 ORTHO05D000001 4.5e-06 55.5 160 25.0
BraA06t24829Z Brassica rapa HOM05D000002 ORTHO05D000047 5.9e-06 55.1 108 25.9
Hma1.2p1_0110F.1_g052700 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.9e-06 55.1 167 25.1
Sabra16G0311100 Salix brachista HOM05D000002 ORTHO05D000001 7.7e-06 54.7 139 25.2
SEGI_05689 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 7.7e-06 54.7 157 21.7


User provided reference genes

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