Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002964.1 Olea europaea HOM05D006134 ORTHO05D007671 4.6e-67 257.7 124 100.0
Oeu055649.1 Olea europaea HOM05D006134 ORTHO05D007671 2.0e-62 242.3 124 93.5
SGA_v2.0_scaffold207G41895 Striga asiatica HOM05D006134 ORTHO05D007671 1.3e-58 229.6 124 87.1
MSTRG.5438 Avicennia marina HOM05D006134 ORTHO05D007671 2.8e-56 221.9 124 85.5
unitig_52.g17376 Utricularia gibba HOM05D006134 ORTHO05D007671 2.4e-55 218.8 124 79.8
SalBow3G4511 Salvia bowleyana HOM05D006134 ORTHO05D007671 3.1e-55 218.4 124 82.3
SGA_v2.0_scaffold80G25864 Striga asiatica HOM05D006134 ORTHO05D007671 4.1e-55 218.0 124 82.3
Migut.N01297 Erythranthe guttata HOM05D006134 ORTHO05D007671 1.2e-54 216.5 124 81.5
Atru.chr9.1880 Acer truncatum HOM05D006134 ORTHO05D007671 1.3e-53 213.0 125 80.8
Ciclev10029589m.g Citrus clementina HOM05D006134 ORTHO05D007671 1.3e-53 213.0 125 80.8
Cc02_g30030 Coffea canephora HOM05D006134 ORTHO05D007671 2.2e-53 212.2 125 81.6
Peaxi162Scf00359g00813 Petunia axillaris HOM05D006134 ORTHO05D007671 3.8e-53 211.5 125 80.8
arahy.Tifrunner.gnm1.ann1.A6PCA1 Arachis hypogaea HOM05D006134 ORTHO05D007671 8.4e-53 210.3 125 80.0
CANSAT80G1040 Cannabis sativa HOM05D006134 ORTHO05D007671 8.4e-53 210.3 125 78.4
Haze_00699 Corylus avellana HOM05D006134 ORTHO05D007671 8.4e-53 210.3 125 79.2
CiPaw.10G137600 Carya illinoinensis HOM05D006134 ORTHO05D007671 1.1e-52 209.9 125 79.2
Gohir.D01G010100 Gossypium hirsutum HOM05D006134 ORTHO05D007671 1.9e-52 209.1 124 79.0
Gorai.002G012200 Gossypium raimondii HOM05D006134 ORTHO05D007671 1.9e-52 209.1 124 79.0
Cpa.g.sc182.12 Carica papaya HOM05D006134 ORTHO05D007671 2.5e-52 208.8 125 78.4
Lalb_Chr10g0093471 Lupinus albus HOM05D006134 ORTHO05D007671 2.5e-52 208.8 125 78.4
Lalb_Chr10g0093491 Lupinus albus HOM05D006134 ORTHO05D007671 2.5e-52 208.8 125 78.4
Manes.11G097800 Manihot esculenta HOM05D006134 ORTHO05D007671 3.2e-52 208.4 125 78.4
Nitab4.5_0000101g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 3.2e-52 208.4 125 79.2
AUR62021421 Chenopodium quinoa HOM05D006134 ORTHO05D007671 4.2e-52 208.0 125 80.8
COL.COLO4_32379 Corchorus olitorius HOM05D006134 ORTHO05D007671 5.5e-52 207.6 124 76.6
Thecc.02G130200 Theobroma cacao HOM05D006134 ORTHO05D007671 5.5e-52 207.6 124 76.6
MELO3C008634.2 Cucumis melo HOM05D006134 ORTHO05D007671 7.2e-52 207.2 125 77.6
CSS0024749 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 9.3e-52 206.8 125 77.6
CSS0037732 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 9.3e-52 206.8 125 77.6
FAN04G0013 Fragaria x ananassa HOM05D006134 ORTHO05D007671 9.3e-52 206.8 124 77.4
FAN08G0898 Fragaria x ananassa HOM05D006134 ORTHO05D007671 9.3e-52 206.8 124 77.4
arahy.Tifrunner.gnm1.ann1.PD8D7M Arachis hypogaea HOM05D006134 ORTHO05D007671 1.2e-51 206.5 125 79.2
Glyma.11G156931 Glycine max HOM05D006134 ORTHO05D007671 1.2e-51 206.5 125 78.4
VMungo1080G1627 Vigna mungo HOM05D006134 ORTHO05D007671 1.2e-51 206.5 125 78.4
Dinv21074 Davidia involucrata HOM05D006134 ORTHO05D007671 1.6e-51 206.1 125 78.4
Ah.01g023220 Amaranthus hybridus HOM05D006134 ORTHO05D007671 2.1e-51 205.7 125 78.4
EL10Ac9g21342 Beta vulgaris HOM05D006134 ORTHO05D007671 2.1e-51 205.7 125 79.2
Duzib052G0391 Durio zibethinus HOM05D006134 ORTHO05D007671 2.1e-51 205.7 124 76.6
Gohir.A01G010500 Gossypium hirsutum HOM05D006134 ORTHO05D007671 2.1e-51 205.7 124 78.2
CAN.G181.11 Capsicum annuum HOM05D006134 ORTHO05D007671 2.7e-51 205.3 125 80.8
Solyc06g007480.3 Solanum lycopersicum HOM05D006134 ORTHO05D007671 2.7e-51 205.3 125 80.8
FvH4_5g23580 Fragaria vesca HOM05D006134 ORTHO05D007671 3.5e-51 204.9 124 76.6
FAN18G0426 Fragaria x ananassa HOM05D006134 ORTHO05D007671 3.5e-51 204.9 124 76.6
FAN18G3769 Fragaria x ananassa HOM05D006134 ORTHO05D007671 3.5e-51 204.9 124 76.6
Hund14365 Selenicereus undatus HOM05D006134 ORTHO05D007671 3.5e-51 204.9 125 79.2
PGSC0003DMG400020551 Solanum tuberosum HOM05D006134 ORTHO05D007671 3.5e-51 204.9 125 80.8
RcHm_v2.0_Chr7g0212881 Rosa chinensis HOM05D006134 ORTHO05D007671 4.6e-51 204.5 124 76.6
CsaV3_2G009990 Cucumis sativus L. HOM05D006134 ORTHO05D007671 6.1e-51 204.1 125 76.8
CSS0027024 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 7.9e-51 203.8 125 76.0
Sed0025018 Sechium edule HOM05D006134 ORTHO05D007671 1.0e-50 203.4 125 75.2
Sopen06g002390 Solanum pennellii HOM05D006134 ORTHO05D007671 1.0e-50 203.4 125 80.0
Psat5g110600 Pisum sativum HOM05D006134 ORTHO05D007671 1.3e-50 203.0 125 76.0
Ca_17958_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 1.8e-50 202.6 125 75.2
Lj6g0003235 Lotus japonicus HOM05D006134 ORTHO05D007671 1.8e-50 202.6 125 76.0
THA.LOC104807806 Tarenaya hassleriana HOM05D006134 ORTHO05D007671 1.8e-50 202.6 124 75.8
Nitab4.5_0000890g0130 Nicotiana tabacum HOM05D006134 ORTHO05D007671 2.3e-50 202.2 132 75.8
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 3.0e-50 201.8 125 78.4
FAN13G0082 Fragaria x ananassa HOM05D006134 ORTHO05D007671 5.1e-50 201.1 124 75.0
Lsat_1_v5_gn_1_25060 Lactuca sativa HOM05D006134 ORTHO05D007671 8.7e-50 200.3 124 78.2
Phvul.005G034200 Phaseolus vulgaris HOM05D006134 ORTHO05D007671 8.7e-50 200.3 125 76.0
Eucgr.F02572 Eucalyptus grandis HOM05D006134 ORTHO05D007671 1.1e-49 199.9 125 78.4
GSVIVG01023976001 Vitis vinifera HOM05D006134 ORTHO05D007671 1.1e-49 199.9 125 76.0
Medtr3g082190 Medicago truncatula HOM05D006134 ORTHO05D007671 1.5e-49 199.5 125 75.2
QL11p052022 Quercus lobata HOM05D006134 ORTHO05D007671 1.5e-49 199.5 124 74.2
QL11p052248 Quercus lobata HOM05D006134 ORTHO05D007671 1.5e-49 199.5 124 74.2
Aqoxy5G01105 Aquilegia oxysepala HOM05D006134 ORTHO05D007671 1.9e-49 199.1 124 73.4
AUR62010905 Chenopodium quinoa HOM05D006134 ORTHO05D007671 1.9e-49 199.1 137 73.7
HanXRQChr12g0383651 Helianthus annuus HOM05D006134 ORTHO05D007671 1.9e-49 199.1 125 76.0
PGR042G1126 Punica granatum HOM05D006134 ORTHO05D007671 1.9e-49 199.1 125 76.8
Duzib248G0743 Durio zibethinus HOM05D006134 ORTHO05D007671 4.3e-49 198.0 149 65.8
ECA247G3382 Erigeron canadensis HOM05D006134 ORTHO05D007671 2.2e-48 195.7 125 77.6
Potri.016G127200 Populus trichocarpa HOM05D006134 ORTHO05D007671 2.8e-48 195.3 124 73.4
TAR376G1190 Trochodendron aralioides HOM05D006134 ORTHO05D007671 6.3e-48 194.1 125 73.6
Aa31LG6G16690 Aethionema arabicum HOM05D006134 ORTHO05D007671 3.1e-47 191.8 124 71.0
Nn6g31911 Nelumbo nucifera HOM05D006134 ORTHO05D007671 5.3e-47 191.0 125 72.0
TWI79G0531 Tripterygium wilfordii HOM05D006134 ORTHO05D007671 6.9e-47 190.7 125 74.4
Rhsim11G0193500 Rhododendron simsii HOM05D006134 ORTHO05D007671 1.2e-46 189.9 171 56.7
Sc08g0002730 Simmondsia chinensis HOM05D006134 ORTHO05D007671 2.0e-46 189.1 124 73.4
Dinv31631 Davidia involucrata HOM05D006134 ORTHO05D007671 3.4e-46 188.3 125 74.4
Sp7g37280 Schrenkiella parvula HOM05D006134 ORTHO05D007671 3.4e-46 188.3 124 70.2
CDE04G1640 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 1.0e-45 186.8 125 72.0
HanXRQChr10g0314981 Helianthus annuus HOM05D006134 ORTHO05D007671 2.2e-45 185.7 125 72.8
TAR628G0583 Trochodendron aralioides HOM05D006134 ORTHO05D007671 3.8e-45 184.9 125 70.4
Thhalv10026572m.g Eutrema salsugineum HOM05D006134 ORTHO05D007671 5.0e-45 184.5 124 67.7
ClCG11G010360 Citrullus lanatus HOM05D006134 ORTHO05D007671 3.2e-44 181.8 108 76.9
CDE02G2427 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 1.8e-42 176.0 125 67.2
MD12G1003500 Malus domestica HOM05D006134 ORTHO05D007671 2.3e-42 175.6 103 79.6
ATR0730G227 Amborella trichopoda HOM05D006134 ORTHO05D007671 3.0e-42 175.3 125 64.0
vmacro02291 Vaccinium macrocarpon HOM05D006134 ORTHO05D007671 3.0e-42 175.3 204 48.5
AUR62013003 Chenopodium quinoa HOM05D006134 ORTHO05D007671 2.0e-41 172.6 103 78.6
Carub.0007s0038 Capsella rubella HOM05D006134 ORTHO05D007671 2.2e-40 169.1 124 62.9
AUR62010013 Chenopodium quinoa HOM05D006134 ORTHO05D007671 4.8e-40 167.9 103 76.7
Prupe.7G004000 Prunus persica HOM05D006134 ORTHO05D007671 1.1e-39 166.8 125 66.4
AUR62015152 Chenopodium quinoa HOM05D006134 ORTHO05D007671 3.1e-39 165.2 103 74.8
PSO170G0646 Papaver somniferum HOM05D006134 ORTHO05D007671 4.1e-39 164.9 125 63.2
PSO210G5022 Papaver somniferum HOM05D006134 ORTHO05D007671 4.1e-39 164.9 125 62.4
AT4G38495 Arabidopsis thaliana HOM05D006134 ORTHO05D007671 9.1e-39 163.7 125 61.6
Os04g0274400 Oryza sativa ssp. japonica HOM05D006134 ORTHO05D007671 7.7e-38 160.6 125 63.2
Mapoly0028s0104 Marchantia polymorpha HOM05D006134 ORTHO05D007671 1.0e-37 160.2 122 59.8
BcaNung01304 Brassica carinata HOM05D006134 ORTHO05D007671 1.7e-37 159.5 124 59.7
A01p00050 Brassica napus HOM05D006134 ORTHO05D007671 1.7e-37 159.5 124 60.5
C01p00090 Brassica napus HOM05D006134 ORTHO05D007671 1.7e-37 159.5 124 59.7
HanXRQChr07g0198481 Helianthus annuus HOM05D006134 ORTHO05D007671 2.2e-37 159.1 125 64.8
Sed0020335 Sechium edule HOM05D006134 ORTHO05D007671 3.8e-37 158.3 123 61.8
AL7G10360 Arabidopsis lyrata HOM05D006134 ORTHO05D007671 6.5e-37 157.5 120 62.5
SMO367G0732 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 8.5e-37 157.1 124 62.1
Pp3c14_10610 Physcomitrium patens HOM05D006134 ORTHO05D007671 2.1e-35 152.5 122 59.0
Pp3c14_10611 Physcomitrium patens HOM05D006134 ORTHO05D007671 2.1e-35 152.5 122 59.0
BcaNung04221 Brassica carinata HOM05D006134 ORTHO05D007671 6.1e-35 151.0 124 58.9
CBR_g12196 Chara braunii HOM05D006134 ORTHO05D007671 4.4e-33 144.8 119 59.7
Zm00001eb420290 Zea mays HOM05D006134 ORTHO05D007671 2.0e-30 136.0 113 55.8
Sabra16G0121200 Salix brachista HOM05D006134 ORTHO05D007671 9.4e-28 127.1 80 72.5
Sabra16G0122100 Salix brachista HOM05D006134 ORTHO05D007671 9.4e-28 127.1 80 72.5
BraA01t00010Z Brassica rapa HOM05D006134 ORTHO05D007671 1.6e-22 109.8 80 62.5
BolC1t00014H Brassica oleracea HOM05D006134 ORTHO05D007671 2.0e-22 109.4 80 61.2
A07p02890 Brassica napus HOM05D006134 ORTHO05D007671 1.7e-21 106.3 99 52.5
BraA07t28089Z Brassica rapa HOM05D006134 ORTHO05D007671 1.7e-21 106.3 99 52.5
Prupe.4G038000 Prunus persica HOM05D006134 ORTHO05D007671 2.2e-21 105.9 105 54.3
Nitab4.5_0000165g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 5.2e-18 94.7 69 66.7
SEGI_00696 Sequoiadendron giganteum HOM05D006134 ORTHO05D007671 3.4e-17 92.0 77 57.1
Ca_02756_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 9.8e-17 90.5 58 72.4
Ca_02758_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 9.8e-17 90.5 58 72.4
Ca_02994_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 3.5e-14 82.0 53 73.6
SHI24498 Sapria himalayana HOM05D006134 ORTHO05D007671 1.3e-13 80.1 58 67.2
CARHR294230 Cardamine hirsuta HOM05D006134 ORTHO05D007671 2.9e-13 79.0 64 59.4
EL10Ac8g18393 Beta vulgaris HOM05D006134 ORTHO05D007671 2.3e-10 69.3 48 70.8
Sabra16G0121700 Salix brachista HOM05D006134 ORTHO05D007671 2.3e-10 69.3 45 68.9
TPR.G34385 Trifolium pratense HOM05D006134 ORTHO05D007671 2.3e-10 69.3 44 72.7
SMO230G0118 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 7.0e-07 57.8 40 65.0


User provided reference genes

Program Settings