Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002940.1 Olea europaea HOM05D005408 ORTHO05D006790 0.0e+00 1751.1 897 100.0
Oeu005084.1 Olea europaea HOM05D005408 ORTHO05D006790 6.3e-307 1057.4 910 64.2
MSTRG.21921 Avicennia marina HOM05D005408 ORTHO05D006790 6.3e-299 1030.8 966 58.8
Migut.N00286 Erythranthe guttata HOM05D005408 ORTHO05D006790 2.8e-283 978.8 947 57.4
SalBow3G0714 Salvia bowleyana HOM05D005408 ORTHO05D006790 2.8e-283 978.8 956 58.1
Dinv27073 Davidia involucrata HOM05D005408 ORTHO05D006790 8.2e-283 977.2 991 57.1
Actinidia20821 Actinidia chinensis HOM05D005408 ORTHO05D006790 1.8e-274 949.5 984 56.1
Dinv29839 Davidia involucrata HOM05D005408 ORTHO05D006790 1.5e-271 939.9 951 56.3
Thecc.04G259100 Theobroma cacao HOM05D005408 ORTHO05D006790 4.4e-268 928.3 929 56.8
CSS0047984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 2.7e-265 919.1 983 54.5
Sopen09g033240 Solanum pennellii HOM05D005408 ORTHO05D006790 3.8e-264 915.2 988 53.4
PGSC0003DMG400017212 Solanum tuberosum HOM05D005408 ORTHO05D006790 4.3e-263 911.8 987 53.8
SGA_v2.0_scaffold43G16217 Striga asiatica HOM05D005408 ORTHO05D006790 1.0e-261 907.1 953 54.9
GSVIVG01027854001 Vitis vinifera HOM05D005408 ORTHO05D006790 1.0e-261 907.1 924 55.7
Peaxi162Scf00392g00730 Petunia axillaris HOM05D005408 ORTHO05D006790 2.3e-261 906.0 964 54.6
Solyc09g090340.3 Solanum lycopersicum HOM05D005408 ORTHO05D006790 5.2e-261 904.8 981 53.0
CAN.G220.39 Capsicum annuum HOM05D005408 ORTHO05D006790 6.8e-261 904.4 1021 51.0
DCAR_024278 Daucus carota HOM05D005408 ORTHO05D006790 2.4e-258 896.0 948 54.0
CSS0016984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 5.4e-258 894.8 975 53.7
Haze_11418 Corylus avellana HOM05D005408 ORTHO05D006790 1.2e-257 893.6 957 53.0
TAR633G1608 Trochodendron aralioides HOM05D005408 ORTHO05D006790 1.2e-257 893.6 1017 52.0
Duzib151G0888 Durio zibethinus HOM05D005408 ORTHO05D006790 2.7e-257 892.5 936 55.3
Cfa014743 Carpinus fangiana HOM05D005408 ORTHO05D006790 1.7e-256 889.8 952 53.3
Nitab4.5_0000044g0530 Nicotiana tabacum HOM05D005408 ORTHO05D006790 8.6e-256 887.5 1027 51.6
Ciclev10004264m.g Citrus clementina HOM05D005408 ORTHO05D006790 4.3e-255 885.2 935 54.9
Nitab4.5_0000596g0060 Nicotiana tabacum HOM05D005408 ORTHO05D006790 5.6e-255 884.8 1076 49.6
QL06p019224 Quercus lobata HOM05D005408 ORTHO05D006790 2.1e-254 882.9 926 55.1
TWI09G0385 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 2.1e-254 882.9 946 53.5
Lj3A679T38 Lonicera japonica HOM05D005408 ORTHO05D006790 1.4e-253 880.2 998 53.0
Prupe.1G042300 Prunus persica HOM05D005408 ORTHO05D006790 1.8e-253 879.8 990 52.3
Cc03_g05790 Coffea canephora HOM05D005408 ORTHO05D006790 3.1e-253 879.0 989 53.7
TWI53G1583 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 3.1e-253 879.0 955 52.5
Duzib212G0761 Durio zibethinus HOM05D005408 ORTHO05D006790 1.2e-252 877.1 931 53.7
CiPaw.02G109300 Carya illinoinensis HOM05D005408 ORTHO05D006790 3.7e-251 872.1 960 53.1
Rhsim02G0041600 Rhododendron simsii HOM05D005408 ORTHO05D006790 8.3e-251 870.9 1141 47.4
Atru.chr4.2004 Acer truncatum HOM05D005408 ORTHO05D006790 9.2e-250 867.5 945 53.7
MD13G1216600 Malus domestica HOM05D005408 ORTHO05D006790 3.5e-249 865.5 967 52.5
TAR362G0279 Trochodendron aralioides HOM05D005408 ORTHO05D006790 4.6e-249 865.1 992 51.8
Nn1g02867 Nelumbo nucifera HOM05D005408 ORTHO05D006790 6.0e-249 864.8 1032 49.2
Manes.15G043200 Manihot esculenta HOM05D005408 ORTHO05D006790 3.9e-248 862.1 943 53.7
SGA_v2.0_scaffold101G29731 Striga asiatica HOM05D005408 ORTHO05D006790 3.9e-248 862.1 907 54.2
COL.COLO4_15917 Corchorus olitorius HOM05D005408 ORTHO05D006790 6.6e-248 861.3 935 53.2
Lj3A684T25 Lonicera japonica HOM05D005408 ORTHO05D006790 6.6e-248 861.3 1012 52.3
MD16G1222000 Malus domestica HOM05D005408 ORTHO05D006790 6.6e-248 861.3 971 51.5
Potri.010G069200 Populus trichocarpa HOM05D005408 ORTHO05D006790 6.6e-248 861.3 942 54.1
Gohir.D02G046500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 4.3e-247 858.6 934 53.5
Manes.15G043300 Manihot esculenta HOM05D005408 ORTHO05D006790 1.2e-246 857.1 941 53.8
Gohir.A02G040500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 1.6e-246 856.7 933 53.4
EL10Ac3g04981 Beta vulgaris HOM05D005408 ORTHO05D006790 2.3e-245 852.8 959 52.6
Potri.008G169200 Populus trichocarpa HOM05D005408 ORTHO05D006790 5.2e-245 851.7 940 53.1
Migut.G00502 Erythranthe guttata HOM05D005408 ORTHO05D006790 4.4e-244 848.6 910 55.7
vmacro15459 Vaccinium macrocarpon HOM05D005408 ORTHO05D006790 7.5e-244 847.8 1104 48.4
CiPaw.01G181400 Carya illinoinensis HOM05D005408 ORTHO05D006790 1.6e-241 840.1 943 51.6
Cpa.g.sc44.32 Carica papaya HOM05D005408 ORTHO05D006790 3.5e-241 839.0 952 53.3
ClCG05G004200 Citrullus lanatus HOM05D005408 ORTHO05D006790 4.6e-241 838.6 975 50.6
Hma1.2p1_0112F.1_g054305 Hydrangea macrophylla HOM05D005408 ORTHO05D006790 4.6e-241 838.6 713 59.6
Sc19g0003230 Simmondsia chinensis HOM05D005408 ORTHO05D006790 1.3e-240 837.0 950 51.5
MELO3C006406.2 Cucumis melo HOM05D005408 ORTHO05D006790 2.3e-240 836.3 979 50.7
RcHm_v2.0_Chr4g0394291 Rosa chinensis HOM05D005408 ORTHO05D006790 3.0e-240 835.9 951 52.3
MSTRG.4147 Avicennia marina HOM05D005408 ORTHO05D006790 2.1e-238 829.7 907 53.4
Eucgr.H03018 Eucalyptus grandis HOM05D005408 ORTHO05D006790 2.8e-238 829.3 943 51.3
AUR62015544 Chenopodium quinoa HOM05D005408 ORTHO05D006790 3.6e-238 828.9 933 52.6
FAN12G0827 Fragaria x ananassa HOM05D005408 ORTHO05D006790 3.1e-237 825.9 937 52.7
Sabra10G0037900 Salix brachista HOM05D005408 ORTHO05D006790 5.2e-237 825.1 940 52.8
CsaV3_3G011930 Cucumis sativus L. HOM05D005408 ORTHO05D006790 1.2e-236 823.9 973 49.4
Sabra08G0129000 Salix brachista HOM05D005408 ORTHO05D006790 1.5e-236 823.5 950 52.1
FvH4_4g04020 Fragaria vesca HOM05D005408 ORTHO05D006790 9.9e-236 820.8 934 52.4
CANSAT54G2691 Cannabis sativa HOM05D005408 ORTHO05D006790 6.4e-235 818.1 957 50.9
CARHR220500 Cardamine hirsuta HOM05D005408 ORTHO05D006790 9.2e-234 814.3 940 50.9
FAN17G2537 Fragaria x ananassa HOM05D005408 ORTHO05D006790 4.6e-233 812.0 945 51.7
AUR62002164 Chenopodium quinoa HOM05D005408 ORTHO05D006790 3.0e-232 809.3 920 51.7
Aa31LG9G3050 Aethionema arabicum HOM05D005408 ORTHO05D006790 2.5e-231 806.2 921 49.7
Gorai.005G051300 Gossypium raimondii HOM05D005408 ORTHO05D006790 7.3e-231 804.7 879 53.2
Sed0026902 Sechium edule HOM05D005408 ORTHO05D006790 9.6e-231 804.3 925 49.8
THA.LOC104804761 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 8.1e-230 801.2 937 50.6
AT4G14310 Arabidopsis thaliana HOM05D005408 ORTHO05D006790 6.9e-229 798.1 930 50.0
HanXRQChr11g0330791 Helianthus annuus HOM05D005408 ORTHO05D006790 4.9e-227 792.0 973 50.4
PSO832G1937 Papaver somniferum HOM05D005408 ORTHO05D006790 1.1e-226 790.8 979 49.5
Carub.0007s2798 Capsella rubella HOM05D005408 ORTHO05D006790 1.4e-226 790.4 943 49.1
Hund03055 Selenicereus undatus HOM05D005408 ORTHO05D006790 2.4e-226 789.6 980 47.7
PSO210G0343 Papaver somniferum HOM05D005408 ORTHO05D006790 3.2e-226 789.3 984 49.7
ECA248G0134 Erigeron canadensis HOM05D005408 ORTHO05D006790 5.4e-226 788.5 917 51.1
Thhalv10024359m.g Eutrema salsugineum HOM05D005408 ORTHO05D006790 5.4e-226 788.5 933 49.0
PGR004G2334 Punica granatum HOM05D005408 ORTHO05D006790 7.1e-226 788.1 924 50.8
Sp7g12340 Schrenkiella parvula HOM05D005408 ORTHO05D006790 1.2e-225 787.3 939 49.3
Aqoxy5G00183 Aquilegia oxysepala HOM05D005408 ORTHO05D006790 1.1e-223 780.8 1007 48.6
MBI07_g31083_MAGBIO Magnolia biondii HOM05D005408 ORTHO05D006790 1.6e-222 776.9 1007 48.7
Lalb_Chr03g0037341 Lupinus albus HOM05D005408 ORTHO05D006790 3.6e-222 775.8 939 49.4
AL7G41950 Arabidopsis lyrata HOM05D005408 ORTHO05D006790 1.8e-221 773.5 942 47.8
FAN22G0039 Fragaria x ananassa HOM05D005408 ORTHO05D006790 1.2e-220 770.8 977 48.6
THA.LOC104822240 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 1.2e-220 770.8 952 49.4
BcaNung06103 Brassica carinata HOM05D005408 ORTHO05D006790 9.9e-220 767.7 925 49.6
arahy.Tifrunner.gnm1.ann1.HQEG75 Arachis hypogaea HOM05D005408 ORTHO05D006790 2.7e-217 759.6 931 48.4
Lj6g0021221 Lotus japonicus HOM05D005408 ORTHO05D006790 4.6e-217 758.8 700 56.6
arahy.Tifrunner.gnm1.ann1.NA4LRU Arachis hypogaea HOM05D005408 ORTHO05D006790 8.7e-216 754.6 934 47.9
C03p76860 Brassica napus HOM05D005408 ORTHO05D006790 1.5e-215 753.8 922 49.6
BcaC01g00205 Brassica carinata HOM05D005408 ORTHO05D006790 2.5e-215 753.1 921 49.0
Psat6g104520 Pisum sativum HOM05D005408 ORTHO05D006790 6.2e-214 748.4 670 59.0
TPR.G25189 Trifolium pratense HOM05D005408 ORTHO05D006790 8.1e-214 748.0 665 59.8
A08p24350 Brassica napus HOM05D005408 ORTHO05D006790 3.1e-213 746.1 924 49.1
Glyma.02G003800 Glycine max HOM05D005408 ORTHO05D006790 1.2e-212 744.2 653 58.0
BolC3t19941H Brassica oleracea HOM05D005408 ORTHO05D006790 6.4e-211 738.4 940 47.9
Medtr1g041685 Medicago truncatula HOM05D005408 ORTHO05D006790 8.4e-211 738.0 922 48.2
Glyma.10G004700 Glycine max HOM05D005408 ORTHO05D006790 4.2e-210 735.7 651 57.8
Phvul.007G275400 Phaseolus vulgaris HOM05D005408 ORTHO05D006790 5.5e-210 735.3 651 57.9
Lsat_1_v5_gn_1_74661 Lactuca sativa HOM05D005408 ORTHO05D006790 7.1e-210 734.9 986 46.8
BraA08t34390Z Brassica rapa HOM05D005408 ORTHO05D006790 4.6e-209 732.3 945 48.1
VMungo0720G1073 Vigna mungo HOM05D005408 ORTHO05D006790 7.9e-209 731.5 656 56.7
Ca_03010_v3 Cicer arietinum L. HOM05D005408 ORTHO05D006790 5.3e-205 718.8 720 55.3
HanXRQChr01g0023201 Helianthus annuus HOM05D005408 ORTHO05D006790 3.5e-201 706.1 930 48.2
Zm00001eb258510 Zea mays HOM05D005408 ORTHO05D006790 2.1e-193 680.2 676 52.8
Zm00001eb191660 Zea mays HOM05D005408 ORTHO05D006790 7.9e-193 678.3 681 52.1
ATR0736G089 Amborella trichopoda HOM05D005408 ORTHO05D006790 7.4e-191 671.8 721 50.8
unitig_736.g22443 Utricularia gibba HOM05D005408 ORTHO05D006790 8.5e-179 631.7 843 46.6
CDE04G2551 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 6.1e-177 625.5 1027 41.8
CDE07G1006 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 2.3e-176 623.6 997 40.9
SEGI_14734 Sequoiadendron giganteum HOM05D005408 ORTHO05D006790 1.0e-152 545.0 715 42.5
HPP92_008326 Vanilla planifolia HOM05D005408 ORTHO05D006790 5.0e-147 526.2 613 47.0
Ah.13g072600 Amaranthus hybridus HOM05D005408 ORTHO05D006790 1.3e-131 474.9 711 45.7
TPR.G25191 Trifolium pratense HOM05D005408 ORTHO05D006790 6.4e-126 456.1 672 42.4
Mapoly0063s0094 Marchantia polymorpha HOM05D005408 ORTHO05D006790 5.8e-103 379.8 556 39.2
Os02g0809900 Oryza sativa ssp. japonica HOM05D005408 ORTHO05D006790 1.6e-100 371.7 300 57.7
Pp3c25_7300 Physcomitrium patens HOM05D005408 ORTHO05D006790 2.8e-97 360.9 742 33.6
Pp3c16_10130 Physcomitrium patens HOM05D005408 ORTHO05D006790 4.5e-95 353.6 481 38.3
AagrBONN_evm.TU.Sc2ySwM_228.3605 Anthoceros agrestis HOM05D005408 ORTHO05D006790 4.8e-89 333.6 450 40.7
SalBow8G3468 Salvia bowleyana HOM05D005408 ORTHO05D006790 4.9e-41 174.1 115 73.0
SalBow7G4774 Salvia bowleyana HOM05D005408 ORTHO05D006790 3.5e-39 167.9 115 72.2
CBR_g30942 Chara braunii HOM05D005408 ORTHO05D006790 2.4e-32 145.2 373 29.5
Rhsim02G0041700 Rhododendron simsii HOM05D005408 ORTHO05D006790 2.6e-26 125.2 176 44.3
Hund11908 Selenicereus undatus HOM05D005408 ORTHO05D006790 7.8e-23 113.6 128 47.7
CiPaw.06G041800 Carya illinoinensis HOM05D005408 ORTHO05D006790 5.6e-21 107.5 335 35.5
C04p41430 Brassica napus HOM05D005408 ORTHO05D006790 9.2e-16 90.1 135 43.7
BolC4t25724H Brassica oleracea HOM05D005408 ORTHO05D006790 1.2e-15 89.7 135 43.7
BolC4t25725H Brassica oleracea HOM05D005408 ORTHO05D006790 5.6e-13 80.9 107 43.9
A04p07780 Brassica napus HOM05D005408 ORTHO05D006790 2.1e-12 79.0 78 55.1
C04p41440 Brassica napus HOM05D005408 ORTHO05D006790 2.3e-11 75.5 107 43.0
SGA_v2.0_scaffold57G20265 Striga asiatica HOM05D005408 ORTHO05D006790 1.2e-10 73.2 82 50.0
BcaC02g09333 Brassica carinata HOM05D005408 ORTHO05D006790 1.6e-07 62.8 55 60.0


User provided reference genes

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