Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 0.0e+00 1340.1 653 100.0
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 8.7e-141 505.0 654 44.6
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 2.4e-138 496.9 654 43.6
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 1.5e-137 494.2 447 56.6
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 1.1e-135 488.0 644 43.9
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 6.1e-134 482.3 655 42.1
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 6.1e-134 482.3 657 42.8
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 7.9e-134 481.9 655 42.4
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 1.8e-133 480.7 659 42.5
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 1.8e-133 480.7 641 42.0
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 1.1e-132 478.0 641 41.8
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 1.5e-132 477.6 643 41.4
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 7.4e-132 475.3 646 42.7
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 2.8e-131 473.4 663 40.9
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 1.8e-130 470.7 658 41.6
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 2.4e-130 470.3 646 41.8
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 2.4e-130 470.3 652 43.3
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 4.5e-129 466.1 656 41.5
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 4.5e-129 466.1 644 42.2
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 5.9e-129 465.7 651 41.5
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 1.0e-128 464.9 663 41.2
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 1.7e-128 464.2 641 41.0
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 2.2e-128 463.8 644 41.5
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 3.8e-128 463.0 642 42.8
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 1.4e-127 461.1 646 41.8
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 1.2e-126 458.0 452 52.7
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 2.1e-126 457.2 646 40.2
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 3.6e-126 456.4 680 41.0
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 7.9e-126 455.3 644 41.1
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 1.8e-125 454.1 651 40.9
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 3.9e-125 453.0 646 42.1
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 5.1e-125 452.6 645 40.6
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 1.1e-124 451.4 648 41.0
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 1.5e-124 451.1 661 40.1
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 2.6e-124 450.3 655 41.2
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 9.7e-124 448.4 638 40.6
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 1.7e-123 447.6 649 39.4
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 1.7e-123 447.6 637 40.7
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 2.8e-123 446.8 656 40.7
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 3.7e-123 446.4 648 38.7
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 8.2e-123 445.3 626 41.1
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 8.2e-123 445.3 644 40.8
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 8.2e-123 445.3 641 39.2
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 3.1e-122 443.4 641 39.0
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 5.9e-121 439.1 480 49.4
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 1.0e-120 438.3 658 40.9
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 1.7e-120 437.6 652 39.4
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 1.7e-120 437.6 637 41.0
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 1.7e-120 437.6 660 39.2
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 6.5e-120 435.6 603 42.0
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 1.5e-119 434.5 653 39.8
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 9.4e-119 431.8 647 38.3
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 3.6e-118 429.9 647 38.2
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 4.7e-118 429.5 658 39.2
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 4.7e-118 429.5 658 39.2
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 4.7e-118 429.5 645 41.1
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 1.0e-117 428.3 448 50.2
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 1.4e-117 427.9 455 49.0
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 3.9e-117 426.4 449 49.2
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 1.1e-116 424.9 650 40.0
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 2.0e-116 424.1 651 39.6
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 1.3e-115 421.4 651 39.3
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 4.8e-115 419.5 442 49.5
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 8.2e-115 418.7 662 39.6
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 4.1e-114 416.4 600 41.7
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 1.2e-113 414.8 454 46.9
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 1.2e-113 414.8 648 39.5
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 2.0e-113 414.1 651 38.1
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 2.0e-113 414.1 456 48.9
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 3.8e-112 409.8 654 37.8
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.5e-111 407.9 651 37.6
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 2.5e-111 407.1 651 37.8
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 4.2e-111 406.4 647 38.8
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 7.5e-108 395.6 646 36.7
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 2.4e-106 390.6 635 37.6
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 1.6e-105 387.9 634 37.1
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 7.7e-105 385.6 653 36.4
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 1.3e-104 384.8 637 36.9
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 6.1e-102 375.9 443 45.8
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 8.0e-102 375.6 649 36.2
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 8.8e-101 372.1 644 35.4
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 9.8e-100 368.6 282 64.2
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 1.3e-99 368.2 443 45.1
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 1.7e-99 367.9 441 45.1
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 2.8e-99 367.1 441 44.9
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 3.7e-99 366.7 442 45.5
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 3.7e-99 366.7 442 45.5
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 5.4e-98 362.8 646 36.1
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 1.6e-97 361.3 443 44.7
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 2.0e-97 360.9 287 59.6
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 2.7e-97 360.5 447 44.5
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 1.0e-96 358.6 654 35.8
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 4.9e-91 339.7 467 42.8
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 1.6e-86 324.7 467 40.5
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.8e-85 321.2 304 54.9
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 7.5e-76 289.3 647 29.8
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 5.2e-69 266.5 272 52.2
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 7.6e-68 262.7 206 59.7
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.7e-67 261.5 236 58.1
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 1.3e-54 218.8 204 52.5
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 1.4e-50 205.3 335 38.5
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 1.4e-50 205.3 494 29.1
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 6.4e-43 179.9 178 48.9
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 5.6e-39 166.8 297 38.4
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 7.1e-34 149.8 103 67.0
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 1.5e-31 142.1 103 64.1
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 5.7e-31 140.2 228 37.7
unitig_748.g8297 Utricularia gibba HOM05D006857 ORTHO05D008679 1.4e-29 135.6 426 25.8
MBI10_g35434_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 9.3e-26 122.9 286 30.1
TPR.G25294 Trifolium pratense HOM05D006857 ORTHO05D008679 3.5e-25 120.9 100 58.0
SEGI_21065 Sequoiadendron giganteum HOM05D006857 ORTHO05D008679 3.9e-16 90.9 100 46.0
SHI00775 Sapria himalayana HOM05D000105 ORTHO05D000023 3.1e-13 81.3 85 44.7
MD13G1221100 Malus domestica HOM05D006857 ORTHO05D008679 9.1e-13 79.7 98 44.9
MBI10_g35432_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.4e-08 65.9 67 50.7
MCO09G143 Micromonas commoda HOM05D006857 ORTHO05D008679 1.4e-08 65.9 178 29.2
HanXRQChr11g0332551 Helianthus annuus HOM05D006857 ORTHO05D008679 1.8e-08 65.5 50 64.0


User provided reference genes

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