Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002884.1 Olea europaea HOM05D005239 ORTHO05D006698 5.4e-295 1016.9 516 100.0
PGSC0003DMG400001672 Solanum tuberosum HOM05D005239 ORTHO05D006698 5.6e-167 591.7 517 63.8
Nitab4.5_0004264g0020 Nicotiana tabacum HOM05D005239 ORTHO05D006698 1.3e-160 570.5 522 60.7
SGA_v2.0_scaffold69G23296 Striga asiatica HOM05D005239 ORTHO05D006698 8.7e-160 567.8 520 62.7
Peaxi162Scf01144g00013 Petunia axillaris HOM05D005239 ORTHO05D006698 4.3e-159 565.5 516 60.7
CSS0007844 Camellia sinensis var. sinensis HOM05D005239 ORTHO05D006698 7.3e-159 564.7 520 61.3
Sopen01g032450 Solanum pennellii HOM05D005239 ORTHO05D006698 1.3e-158 563.9 520 61.2
Solyc01g080860.3 Solanum lycopersicum HOM05D005239 ORTHO05D006698 2.1e-158 563.1 519 61.1
Hma1.2p1_0601F.1_g187220 Hydrangea macrophylla HOM05D005239 ORTHO05D006698 6.9e-157 558.1 529 60.1
Dinv43567 Davidia involucrata HOM05D005239 ORTHO05D006698 1.7e-155 553.5 446 66.6
SGA_v2.0_scaffold52G19274 Striga asiatica HOM05D005239 ORTHO05D006698 2.2e-155 553.1 518 61.4
Dinv44000 Davidia involucrata HOM05D005239 ORTHO05D001060 8.4e-155 551.2 439 68.1
vmacro21097 Vaccinium macrocarpon HOM05D005239 ORTHO05D006698 2.1e-153 546.6 517 60.3
CiPaw.13G020400 Carya illinoinensis HOM05D005239 ORTHO05D006698 5.1e-152 542.0 519 60.1
Actinidia21601 Actinidia chinensis HOM05D005239 ORTHO05D006698 6.7e-152 541.6 517 60.2
CAN.G1480.7 Capsicum annuum HOM05D005239 ORTHO05D006698 8.7e-152 541.2 441 65.8
Rhsim01G0145300 Rhododendron simsii HOM05D005239 ORTHO05D006698 1.3e-150 537.3 552 57.2
Cfa011001 Carpinus fangiana HOM05D002067 ORTHO05D001060 4.5e-148 528.9 518 58.1
Lj9A547G68 Lonicera japonica HOM05D005239 ORTHO05D006698 1.9e-146 523.5 340 79.1
PGR119G0794 Punica granatum HOM05D005239 ORTHO05D006698 7.1e-146 521.5 535 57.0
RcHm_v2.0_Chr6g0273481 Rosa chinensis HOM05D005239 ORTHO05D006698 9.3e-146 521.2 520 59.0
TAR636G2805 Trochodendron aralioides HOM05D005239 ORTHO05D006698 3.5e-145 519.2 522 57.5
CsaV3_3G010220 Cucumis sativus L. HOM05D005239 ORTHO05D006698 4.6e-145 518.8 528 58.0
Thecc.04G216000 Theobroma cacao HOM05D005239 ORTHO05D006698 1.3e-144 517.3 518 57.5
MELO3C006242.2 Cucumis melo HOM05D005239 ORTHO05D006698 2.3e-144 516.5 529 57.7
Gorai.006G218900 Gossypium raimondii HOM05D005239 ORTHO05D006698 3.0e-144 516.2 525 56.8
Haze_02934 Corylus avellana HOM05D005239 ORTHO05D006698 6.7e-144 515.0 523 57.9
Duzib151G1142 Durio zibethinus HOM05D005239 ORTHO05D006698 8.7e-144 514.6 529 55.2
Gohir.A09G201600 Gossypium hirsutum HOM05D005239 ORTHO05D006698 1.5e-143 513.8 525 56.8
DCAR_029633 Daucus carota HOM05D005239 ORTHO05D006698 5.6e-143 511.9 514 57.8
Gohir.D09G195500 Gossypium hirsutum HOM05D005239 ORTHO05D006698 7.4e-143 511.5 525 56.6
TAR629G3002 Trochodendron aralioides HOM05D005239 ORTHO05D006698 1.3e-142 510.8 475 60.8
FvH4_2g12720 Fragaria vesca HOM05D005239 ORTHO05D006698 3.7e-142 509.2 516 58.7
ClCG05G002730 Citrullus lanatus HOM05D005239 ORTHO05D006698 4.8e-142 508.8 528 57.6
Prupe.1G571600 Prunus persica HOM05D005239 ORTHO05D006698 6.2e-142 508.4 522 56.7
Cc02_g25930 Coffea canephora HOM05D005239 ORTHO05D006698 8.2e-142 508.1 363 73.3
TWI59G0212 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 8.2e-142 508.1 525 56.0
GSVIVG01018386001 Vitis vinifera HOM05D005239 ORTHO05D006698 1.8e-141 506.9 513 56.7
Nn6g33642 Nelumbo nucifera HOM05D005239 ORTHO05D006698 2.4e-141 506.5 522 55.6
MD08G1235300 Malus domestica HOM05D005239 ORTHO05D006698 3.1e-141 506.1 521 55.7
Sc20g0003020 Simmondsia chinensis HOM05D005239 ORTHO05D006698 1.2e-140 504.2 522 58.4
COL.COLO4_20862 Corchorus olitorius HOM05D005239 ORTHO05D006698 2.6e-140 503.1 521 55.3
TWI14G1099 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 2.6e-140 503.1 527 55.0
Sed0027364 Sechium edule HOM05D005239 ORTHO05D006698 3.4e-140 502.7 524 56.5
QL04p024849 Quercus lobata HOM05D005239 ORTHO05D006698 5.8e-140 501.9 438 61.4
FAN27G2303 Fragaria x ananassa HOM05D005239 ORTHO05D006698 7.6e-140 501.5 529 57.3
Ciclev10020370m.g Citrus clementina HOM05D005239 ORTHO05D006698 1.7e-139 500.4 452 61.1
ECA234G1231 Erigeron canadensis HOM05D005239 ORTHO05D006698 1.7e-139 500.4 523 55.6
CANSAT54G1536 Cannabis sativa HOM05D005239 ORTHO05D006698 2.9e-139 499.6 518 56.2
AUR62035533 Chenopodium quinoa HOM05D005239 ORTHO05D006698 6.5e-139 498.4 519 55.5
FAN15G3107 Fragaria x ananassa HOM05D005239 ORTHO05D006698 6.5e-139 498.4 529 56.9
Sed0010493 Sechium edule HOM05D005239 ORTHO05D006698 6.5e-139 498.4 524 56.9
Glyma.20G243400 Glycine max HOM05D005239 ORTHO05D006698 1.1e-138 497.7 443 61.9
Sabra02G0168400 Salix brachista HOM05D005239 ORTHO05D006698 1.1e-138 497.7 529 55.0
AUR62041654 Chenopodium quinoa HOM05D005239 ORTHO05D006698 1.4e-138 497.3 514 55.8
Atru.chr9.1540 Acer truncatum HOM05D005239 ORTHO05D006698 7.1e-138 495.0 426 60.8
Manes.05G061000 Manihot esculenta HOM05D005239 ORTHO05D006698 2.7e-137 493.0 524 56.1
Potri.002G216100 Populus trichocarpa HOM05D005239 ORTHO05D006698 3.0e-136 489.6 529 54.6
Ah.06g191320 Amaranthus hybridus HOM05D005239 ORTHO05D006698 8.7e-136 488.0 514 56.0
Eucgr.H02846 Eucalyptus grandis HOM05D005239 ORTHO05D006698 8.7e-136 488.0 545 54.1
HanXRQChr17g0562471 Helianthus annuus HOM05D005239 ORTHO05D006698 3.3e-135 486.1 527 55.4
THA.LOC104802511 Tarenaya hassleriana HOM05D005239 ORTHO05D006698 4.3e-135 485.7 524 54.0
HPP92_001886 Vanilla planifolia HOM05D005239 ORTHO05D006698 9.7e-135 484.6 536 54.9
Phvul.007G006700 Phaseolus vulgaris HOM05D005239 ORTHO05D006698 1.4e-133 480.7 460 59.8
unitig_26.g9718 Utricularia gibba HOM05D005239 ORTHO05D006698 1.4e-133 480.7 549 53.9
Nitab4.5_0001476g0120 Nicotiana tabacum HOM05D005239 ORTHO05D006698 6.9e-133 478.4 522 54.4
EL10Ac4g08842 Beta vulgaris HOM05D005239 ORTHO05D006698 1.5e-132 477.2 512 53.9
VMungo0720G0476 Vigna mungo HOM05D005239 ORTHO05D006698 1.5e-132 477.2 498 56.4
arahy.Tifrunner.gnm1.ann1.X9CQTL Arachis hypogaea HOM05D005239 ORTHO05D006698 7.7e-132 474.9 438 60.3
Lj5g0010357 Lotus japonicus HOM05D005239 ORTHO05D006698 1.3e-131 474.2 451 59.9
Aqoxy3G02472 Aquilegia oxysepala HOM05D005239 ORTHO05D006698 3.8e-131 472.6 478 56.7
arahy.Tifrunner.gnm1.ann1.XN1C7B Arachis hypogaea HOM05D005239 ORTHO05D006698 5.0e-131 472.2 443 59.8
THA.LOC104817164 Tarenaya hassleriana HOM05D005239 ORTHO05D006698 1.1e-130 471.1 530 52.8
PSO170G2576 Papaver somniferum HOM05D005239 ORTHO05D006698 1.6e-129 467.2 539 51.4
ATR1153G024 Amborella trichopoda HOM05D005239 ORTHO05D006698 3.6e-129 466.1 447 57.0
PSO302G0170 Papaver somniferum HOM05D005239 ORTHO05D006698 3.6e-129 466.1 453 56.7
CDE04G1215 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 7.9e-129 464.9 524 51.9
Aa31LG1G26110 Aethionema arabicum HOM05D005239 ORTHO05D006698 2.3e-128 463.4 519 52.2
Ca_11344_v3 Cicer arietinum L. HOM05D005239 ORTHO05D006698 2.3e-128 463.4 446 57.8
Medtr1g116110 Medicago truncatula HOM05D005239 ORTHO05D006698 7.4e-127 458.4 456 56.6
TPR.G10426 Trifolium pratense HOM05D005239 ORTHO05D006698 2.8e-126 456.4 448 56.9
Lalb_Chr02g0143811 Lupinus albus HOM05D005239 ORTHO05D006698 8.2e-126 454.9 439 58.3
Sp4g26610 Schrenkiella parvula HOM05D005239 ORTHO05D006698 3.1e-125 453.0 526 52.7
Thhalv10001456m.g Eutrema salsugineum HOM05D005239 ORTHO05D006698 2.0e-124 450.3 522 51.3
AL4G43540 Arabidopsis lyrata HOM05D005239 ORTHO05D006698 2.2e-123 446.8 523 51.1
Os01g0527700 Oryza sativa ssp. japonica HOM05D005239 ORTHO05D006698 5.0e-123 445.7 339 67.0
Psat6g232360 Pisum sativum HOM05D005239 ORTHO05D006698 8.5e-123 444.9 338 68.3
BcaC02g07098 Brassica carinata HOM05D005239 ORTHO05D006698 1.1e-122 444.5 438 55.7
Carub.0004s2708 Capsella rubella HOM05D005239 ORTHO05D006698 1.1e-122 444.5 521 50.5
C04p71050 Brassica napus HOM05D000073 ORTHO05D006698 7.2e-122 441.8 338 66.9
BolC4t28610H Brassica oleracea HOM05D005239 ORTHO05D006698 2.1e-121 440.3 518 51.0
Migut.B01467 Erythranthe guttata HOM05D005239 ORTHO05D006698 6.1e-121 438.7 386 64.2
BcaB06g29384 Brassica carinata HOM05D005239 ORTHO05D006698 1.0e-120 438.0 517 50.7
AT2G44520 Arabidopsis thaliana HOM05D005239 ORTHO05D006698 1.4e-120 437.6 520 50.4
Zm00001eb005400 Zea mays HOM05D005239 ORTHO05D006698 2.3e-120 436.8 337 68.5
BraA04t18797Z Brassica rapa HOM05D005239 ORTHO05D006698 3.0e-120 436.4 517 50.7
A04p33360 Brassica napus HOM05D000073 ORTHO05D006698 2.0e-119 433.7 350 64.6
Zm00001eb402310 Zea mays HOM05D005239 ORTHO05D006698 2.6e-119 433.3 418 56.2
BcaC02g12301 Brassica carinata HOM05D005239 ORTHO05D006698 8.2e-118 428.3 364 62.6
C04p05410 Brassica napus HOM05D005239 ORTHO05D006698 4.1e-117 426.0 340 65.3
BolC4t22181H Brassica oleracea HOM05D005239 ORTHO05D006698 4.1e-117 426.0 340 65.3
Lsat_1_v5_gn_4_39040 Lactuca sativa HOM05D005239 ORTHO05D006698 5.3e-117 425.6 515 51.7
MD15G1426600 Malus domestica HOM05D005239 ORTHO05D006698 5.3e-117 425.6 305 71.5
Duzib212G0896 Durio zibethinus HOM05D005239 ORTHO05D006698 4.2e-114 416.0 529 48.4
BcaNung07053 Brassica carinata HOM05D005239 ORTHO05D006698 8.2e-110 401.7 517 48.2
SEGI_24425 Sequoiadendron giganteum HOM05D005239 ORTHO05D006698 1.0e-107 394.8 283 67.8
Actinidia33289 Actinidia chinensis HOM05D005239 ORTHO05D006698 2.9e-107 393.3 392 57.4
Oeu037395.1 Olea europaea HOM05D005239 ORTHO05D006698 4.7e-105 386.0 371 63.6
Cpa.g.sc20.28 Carica papaya HOM05D005239 ORTHO05D006698 9.4e-98 361.7 319 61.8
CAN.G74.42 Capsicum annuum HOM05D005239 ORTHO05D006698 3.6e-97 359.8 316 60.4
AagrBONN_evm.TU.Sc2ySwM_369.187 Anthoceros agrestis HOM05D005239 ORTHO05D006698 1.7e-94 350.9 455 45.1
Hma1.2p1_0601F.1_g187230 Hydrangea macrophylla HOM05D005239 ORTHO05D006698 2.3e-91 340.5 368 55.2
Mapoly0029s0153 Marchantia polymorpha HOM05D005239 ORTHO05D006698 1.4e-88 331.3 347 50.1
CDE12G0888 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 1.8e-88 330.9 251 68.5
CARHR139710 Cardamine hirsuta HOM05D005239 ORTHO05D006698 7.5e-87 325.5 248 66.9
SMO364G0841 Selaginella moellendorffii HOM05D005239 ORTHO05D006698 1.3e-86 324.7 420 44.3
PSO357G0304 Papaver somniferum HOM05D005239 ORTHO05D006698 3.1e-85 320.1 201 79.1
Pp3c14_19200 Physcomitrium patens HOM05D005239 ORTHO05D006698 1.4e-77 294.7 251 59.0
CBR_g3821 Chara braunii HOM05D005239 ORTHO05D006698 2.7e-76 290.4 513 38.2
BraA05t19443Z Brassica rapa HOM05D005239 ORTHO05D006698 1.9e-66 257.7 289 52.6
Cre12.g516350 Chlamydomonas reinhardtii HOM05D005239 ORTHO05D006698 2.5e-66 257.3 269 50.9
A05p04670 Brassica napus HOM05D005239 ORTHO05D006698 1.4e-64 251.5 281 52.7
PRCOL_00000009 Prasinoderma coloniale HOM05D005239 ORTHO05D006698 1.5e-63 248.1 334 43.1
MD15G1426900 Malus domestica HOM05D005239 ORTHO05D006698 6.0e-60 236.1 189 64.6
MCO03G363 Micromonas commoda HOM05D005239 ORTHO05D006698 3.9e-59 233.4 272 47.8
Aqoxy5G02001 Aquilegia oxysepala HOM05D005239 ORTHO05D006698 3.4e-55 220.3 236 53.4
BcaB02g08828 Brassica carinata HOM05D005239 ORTHO05D006698 2.7e-52 210.7 245 52.2
SHI13675 Sapria himalayana HOM05D005239 ORTHO05D006698 5.4e-45 186.4 203 54.7
FAN24G3432 Fragaria x ananassa HOM05D005239 ORTHO05D006698 3.9e-35 153.7 267 42.3
Cfa027222 Carpinus fangiana HOM05D005239 ORTHO05D006698 1.6e-33 148.3 296 36.5
PGR004G1759 Punica granatum HOM05D005239 ORTHO05D006698 2.1e-33 147.9 121 67.8
PSO081G0040 Papaver somniferum HOM05D005239 ORTHO05D006698 6.7e-27 126.3 84 73.8
TPR.G37315 Trifolium pratense HOM05D005239 ORTHO05D006698 2.5e-26 124.4 83 72.3
Glyma.10G293300 Glycine max HOM05D005239 ORTHO05D006698 3.3e-26 124.0 76 76.3
RcHm_v2.0_Chr6g0271171 Rosa chinensis HOM05D005239 ORTHO05D006698 1.1e-21 109.0 72 73.6
RcHm_v2.0_Chr7g0200821 Rosa chinensis HOM05D005239 ORTHO05D006698 1.8e-19 101.7 72 69.4
Cc02_g25970 Coffea canephora HOM05D005239 ORTHO05D006698 2.6e-15 87.8 99 50.5
CDE12G0056 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 3.3e-10 70.9 124 38.7
SHI13676 Sapria himalayana HOM05D005239 ORTHO05D006698 9.7e-10 69.3 79 54.4
MSTRG.17096 Avicennia marina HOM05D005239 ORTHO05D006698 1.0e-06 59.3 34 88.2


User provided reference genes

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