Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002864.1 Olea europaea HOM05D004609 ORTHO05D005537 1.3e-134 483.0 239 100.0
Oeu059598.1 Olea europaea HOM05D004609 ORTHO05D005537 6.1e-124 447.6 239 93.3
Dinv32753 Davidia involucrata HOM05D004609 ORTHO05D005537 3.2e-109 398.7 234 83.3
Migut.D02219 Erythranthe guttata HOM05D004609 ORTHO05D005537 9.4e-109 397.1 234 80.8
Dinv32752 Davidia involucrata HOM05D004609 ORTHO05D005537 6.1e-108 394.4 234 82.5
TWI79G0533 Tripterygium wilfordii HOM05D004609 ORTHO05D005537 4.1e-104 381.7 233 80.3
Lj1A191G19 Lonicera japonica HOM05D004609 ORTHO05D005537 9.1e-104 380.6 231 81.0
RcHm_v2.0_Chr5g0059481 Rosa chinensis HOM05D004609 ORTHO05D005537 9.1e-104 380.6 234 78.2
MSTRG.17807 Avicennia marina HOM05D004609 ORTHO05D005537 2.6e-103 379.0 234 80.8
SalBow6G5279 Salvia bowleyana HOM05D004609 ORTHO05D005537 3.5e-103 378.6 231 80.1
CSS0023307 Camellia sinensis var. sinensis HOM05D004609 ORTHO05D005537 5.9e-103 377.9 236 79.7
COL.COLO4_18340 Corchorus olitorius HOM05D004609 ORTHO05D005537 5.9e-103 377.9 233 81.1
Hma1.2p1_1031F.1_g250010 Hydrangea macrophylla HOM05D004609 ORTHO05D005537 5.9e-103 377.9 231 79.7
CSS0022919 Camellia sinensis var. sinensis HOM05D004609 ORTHO05D005537 1.0e-102 377.1 236 79.7
CAN.G631.22 Capsicum annuum HOM05D004609 ORTHO05D005537 1.0e-102 377.1 232 80.2
Actinidia07134 Actinidia chinensis HOM05D004609 ORTHO05D005537 2.2e-102 375.9 231 79.7
FAN11G0836 Fragaria x ananassa HOM05D004609 ORTHO05D005537 5.0e-102 374.8 234 77.8
Sopen11g028080 Solanum pennellii HOM05D004609 ORTHO05D005537 6.5e-102 374.4 232 79.3
FAN21G1816 Fragaria x ananassa HOM05D004609 ORTHO05D005537 8.5e-102 374.0 234 77.4
Solyc11g069360.2 Solanum lycopersicum HOM05D004609 ORTHO05D005537 8.5e-102 374.0 232 78.4
Prupe.6G100900 Prunus persica HOM05D004609 ORTHO05D005537 1.5e-101 373.2 234 79.1
Cc01_g11180 Coffea canephora HOM05D004609 ORTHO05D005537 1.9e-101 372.9 231 78.4
PGSC0003DMG400008104 Solanum tuberosum HOM05D004609 ORTHO05D005537 1.9e-101 372.9 232 78.4
FvH4_3g32470 Fragaria vesca HOM05D004609 ORTHO05D005537 4.2e-101 371.7 234 77.4
FAN16G0772 Fragaria x ananassa HOM05D004609 ORTHO05D005537 5.5e-101 371.3 234 76.5
CiPaw.13G112500 Carya illinoinensis HOM05D004609 ORTHO05D005537 9.4e-101 370.5 234 76.5
Cfa011322 Carpinus fangiana HOM05D004609 ORTHO05D005537 1.6e-100 369.8 234 77.4
Eucgr.B02494 Eucalyptus grandis HOM05D004609 ORTHO05D005537 2.7e-100 369.0 232 77.6
FAN25G2211 Fragaria x ananassa HOM05D004609 ORTHO05D005537 1.0e-99 367.1 234 75.6
MD11G1134900 Malus domestica HOM05D004609 ORTHO05D005537 1.4e-99 366.7 234 78.2
TAR633G2157 Trochodendron aralioides HOM05D004609 ORTHO05D005537 3.0e-99 365.5 234 77.8
Manes.11G144600 Manihot esculenta HOM05D004609 ORTHO05D005537 5.2e-99 364.8 232 76.3
HanXRQChr01g0016861 Helianthus annuus HOM05D004609 ORTHO05D005537 1.2e-98 363.6 229 78.6
Thecc.09G339900 Theobroma cacao HOM05D004609 ORTHO05D005537 1.2e-98 363.6 233 78.1
Gohir.A13G230400 Gossypium hirsutum HOM05D004609 ORTHO05D005537 1.5e-98 363.2 229 79.9
QL03p063529 Quercus lobata HOM05D004609 ORTHO05D005537 1.5e-98 363.2 230 79.1
QL03p063925 Quercus lobata HOM05D004609 ORTHO05D005537 1.5e-98 363.2 230 79.1
QL01p022329 Quercus lobata HOM05D004609 ORTHO05D005537 2.0e-98 362.8 234 76.1
TPR.G15569 Trifolium pratense HOM05D004609 ORTHO05D005537 3.3e-98 362.1 229 76.9
Gorai.013G266600 Gossypium raimondii HOM05D004609 ORTHO05D005537 4.4e-98 361.7 230 79.1
Duzib168G0882 Durio zibethinus HOM05D004609 ORTHO05D005537 5.7e-98 361.3 233 77.3
Rhsim01G0217400 Rhododendron simsii HOM05D004609 ORTHO05D005537 7.5e-98 360.9 233 76.0
SalBow3G2420 Salvia bowleyana HOM05D004609 ORTHO05D005537 7.5e-98 360.9 261 72.4
Lj3g0003868 Lotus japonicus HOM05D004609 ORTHO05D005537 1.3e-97 360.1 213 81.7
Gohir.D13G235900 Gossypium hirsutum HOM05D004609 ORTHO05D005537 1.7e-97 359.8 230 78.7
MD03G1117100 Malus domestica HOM05D004609 ORTHO05D005537 8.2e-97 357.5 234 76.1
GSVIVG01025180001 Vitis vinifera HOM05D004609 ORTHO05D005537 8.2e-97 357.5 219 79.9
VMungo1127G1456 Vigna mungo HOM05D004609 ORTHO05D005537 1.1e-96 357.1 229 76.0
arahy.Tifrunner.gnm1.ann1.M55FGE Arachis hypogaea HOM05D004609 ORTHO05D005537 1.4e-96 356.7 217 79.7
SGA_v2.0_scaffold2G00896 Striga asiatica HOM05D004609 ORTHO05D005537 1.4e-96 356.7 234 76.5
Psat1g080680 Pisum sativum HOM05D004609 ORTHO05D005537 1.8e-96 356.3 229 76.0
Potri.009G025500 Populus trichocarpa HOM05D004609 ORTHO05D005537 4.1e-96 355.1 231 74.5
Glyma.11G147000 Glycine max HOM05D004609 ORTHO05D005537 5.3e-96 354.8 213 79.3
Ca_05255_v3 Cicer arietinum L. HOM05D004609 ORTHO05D005537 7.0e-96 354.4 229 75.5
Phvul.011G078800 Phaseolus vulgaris HOM05D004609 ORTHO05D005537 7.0e-96 354.4 229 75.5
Haze_10438 Corylus avellana HOM05D004609 ORTHO05D005537 1.6e-95 353.2 212 81.6
DCAR_006058 Daucus carota HOM05D004609 ORTHO05D005537 2.7e-95 352.4 213 79.8
arahy.Tifrunner.gnm1.ann1.DB762C Arachis hypogaea HOM05D004609 ORTHO05D005537 3.5e-95 352.1 217 79.3
arahy.Tifrunner.gnm1.ann1.ZK6QPF Arachis hypogaea HOM05D004609 ORTHO05D005537 3.5e-95 352.1 217 79.3
Lsat_1_v5_gn_5_178620 Lactuca sativa HOM05D004609 ORTHO05D005537 3.5e-95 352.1 230 73.0
PSO339G4039 Papaver somniferum HOM05D004609 ORTHO05D005537 5.9e-95 351.3 229 77.3
THA.LOC104799500 Tarenaya hassleriana HOM05D004609 ORTHO05D005537 5.9e-95 351.3 231 72.7
Nitab4.5_0000650g0230 Nicotiana tabacum HOM05D004609 ORTHO05D005537 1.0e-94 350.5 232 78.0
Sc03g0007720 Simmondsia chinensis HOM05D004609 ORTHO05D005537 2.2e-94 349.4 214 78.5
unitig_749.g13641 Utricularia gibba HOM05D004609 ORTHO05D005537 2.9e-94 349.0 229 73.4
Atru.chr3.3636 Acer truncatum HOM05D004609 ORTHO05D005537 3.8e-94 348.6 218 81.2
Ciclev10029204m.g Citrus clementina HOM05D004609 ORTHO05D005537 3.8e-94 348.6 230 76.1
PGR102G0162 Punica granatum HOM05D004609 ORTHO05D005537 5.0e-94 348.2 231 75.3
TAR623G1761 Trochodendron aralioides HOM05D004609 ORTHO05D005537 6.5e-94 347.8 235 75.3
Cpa.g.sc216.14 Carica papaya HOM05D004609 ORTHO05D005537 1.5e-93 346.7 222 75.2
Lalb_Chr19g0137311 Lupinus albus HOM05D004609 ORTHO05D005537 1.5e-93 346.7 211 79.1
MBI07_g19316_MAGBIO Magnolia biondii HOM05D004609 ORTHO05D005537 1.5e-93 346.7 227 77.1
Sabra09G0016900 Salix brachista HOM05D004609 ORTHO05D005537 2.5e-93 345.9 231 72.7
PSO063G6287 Papaver somniferum HOM05D004609 ORTHO05D005537 3.2e-93 345.5 229 76.4
Nn2g13092 Nelumbo nucifera HOM05D004609 ORTHO05D005537 4.2e-93 345.1 217 79.7
PSO478G0080 Papaver somniferum HOM05D004609 ORTHO05D005537 7.2e-93 344.4 224 77.2
CARHR274250 Cardamine hirsuta HOM05D004609 ORTHO05D005537 9.4e-93 344.0 233 71.7
AL8G37180 Arabidopsis lyrata HOM05D004609 ORTHO05D005537 1.2e-92 343.6 225 74.7
EL10Ac7g18241 Beta vulgaris HOM05D004609 ORTHO05D005537 4.7e-92 341.7 217 77.9
Medtr4g059530 Medicago truncatula HOM05D004609 ORTHO05D005537 6.1e-92 341.3 235 73.6
Medtr4g459430 Medicago truncatula HOM05D004609 ORTHO05D005537 6.1e-92 341.3 235 73.6
Rhsim13G0094100 Rhododendron simsii HOM05D004609 ORTHO05D005537 6.1e-92 341.3 211 78.2
Sp6g22160 Schrenkiella parvula HOM05D004609 ORTHO05D005537 6.1e-92 341.3 230 72.2
BcaB08g36354 Brassica carinata HOM05D004609 ORTHO05D005537 8.0e-92 340.9 230 72.2
BraA10t43855Z Brassica rapa HOM05D004609 ORTHO05D005537 1.4e-91 340.1 228 73.2
Carub.0008s2127 Capsella rubella HOM05D004609 ORTHO05D005537 1.4e-91 340.1 227 73.6
C09p53290 Brassica napus HOM05D004609 ORTHO05D005537 1.8e-91 339.7 228 72.8
AUR62001379 Chenopodium quinoa HOM05D004609 ORTHO05D005537 2.3e-91 339.3 232 71.6
BolC9t58203H Brassica oleracea HOM05D004609 ORTHO05D005537 5.2e-91 338.2 228 72.4
Hund10347 Selenicereus undatus HOM05D004609 ORTHO05D005537 1.5e-90 336.7 226 72.1
A10p17780 Brassica napus HOM05D004609 ORTHO05D005537 2.0e-90 336.3 228 72.8
PSO017G0942 Papaver somniferum HOM05D004609 ORTHO05D005537 2.0e-90 336.3 226 76.5
Ah.15g094800 Amaranthus hybridus HOM05D004609 ORTHO05D005537 3.4e-90 335.5 232 71.1
Sed0020077 Sechium edule HOM05D004609 ORTHO05D005537 5.7e-90 334.7 231 71.4
ECA248G0132 Erigeron canadensis HOM05D004609 ORTHO05D005537 7.5e-90 334.3 214 76.6
Lsat_1_v5_gn_1_65361 Lactuca sativa HOM05D004609 ORTHO05D005537 1.3e-89 333.6 232 71.1
Aqoxy3G03284 Aquilegia oxysepala HOM05D004609 ORTHO05D005537 2.2e-89 332.8 213 77.9
CsaV3_1G012730 Cucumis sativus L. HOM05D004609 ORTHO05D005537 6.3e-89 331.3 231 71.0
ATR0115G025 Amborella trichopoda HOM05D004609 ORTHO05D005537 2.4e-88 329.3 220 72.7
DCAR_013489 Daucus carota HOM05D004609 ORTHO05D005537 1.6e-87 326.6 232 72.0
CANSAT54G0849 Cannabis sativa HOM05D004609 ORTHO05D005537 2.7e-87 325.9 213 77.9
BcaC04g19719 Brassica carinata HOM05D004298 ORTHO05D006236 1.0e-86 323.9 211 73.9
MELO3C026847.2 Cucumis melo HOM05D004609 ORTHO05D005537 1.3e-86 323.6 231 69.3
Hund02313 Selenicereus undatus HOM05D004609 ORTHO05D005537 1.7e-86 323.2 222 73.0
Thhalv10014329m.g Eutrema salsugineum HOM05D004609 ORTHO05D005537 2.8e-84 315.8 211 72.5
Zm00001eb007760 Zea mays HOM05D004609 ORTHO05D005537 4.0e-83 312.0 209 70.8
Aa31LG1G12570 Aethionema arabicum HOM05D004609 ORTHO05D005537 5.2e-83 311.6 213 73.2
ClCG03G002070 Citrullus lanatus HOM05D004609 ORTHO05D005537 3.4e-82 308.9 297 56.9
CDE09G0954 Ceratophyllum demersum HOM05D004609 ORTHO05D005537 4.4e-82 308.5 206 69.4
Peaxi162Scf00270g00828 Petunia axillaris HOM05D004609 ORTHO05D005537 5.7e-82 308.1 212 74.5
AUR62009522 Chenopodium quinoa HOM05D004609 ORTHO05D005537 2.8e-81 305.8 205 73.7
AUR62025599 Chenopodium quinoa HOM05D004609 ORTHO05D005537 2.8e-81 305.8 205 73.7
Nitab4.5_0005621g0180 Nicotiana tabacum HOM05D004609 ORTHO05D005537 3.7e-81 305.4 344 52.0
SEGI_11191 Sequoiadendron giganteum HOM05D004609 ORTHO05D005537 9.2e-80 300.8 213 67.6
HPP92_018599 Vanilla planifolia HOM05D004609 ORTHO05D005537 1.0e-78 297.4 208 70.7
arahy.Tifrunner.gnm1.ann1.GT28YG Arachis hypogaea HOM05D004609 ORTHO05D005537 1.5e-74 283.5 217 67.7
SGA_v2.0_scaffold80G25763 Striga asiatica HOM05D004609 ORTHO05D005537 2.6e-74 282.7 176 78.4
Nitab4.5_0006639g0040 Nicotiana tabacum HOM05D004609 ORTHO05D005537 5.4e-72 275.0 175 77.1
Nitab4.5_0004205g0030 Nicotiana tabacum HOM05D004609 ORTHO05D005537 7.0e-72 274.6 175 77.7
Nitab4.5_0012973g0010 Nicotiana tabacum HOM05D004609 ORTHO05D005537 2.3e-70 269.6 171 74.9
BcaB01g04662 Brassica carinata HOM05D004609 ORTHO05D005537 8.6e-70 267.7 167 75.4
vmacro03196 Vaccinium macrocarpon HOM05D004609 ORTHO05D005537 8.9e-67 257.7 175 74.3
AagrBONN_evm.TU.Sc2ySwM_368.1656 Anthoceros agrestis HOM05D004609 ORTHO05D005537 1.7e-65 253.4 219 53.9
Mapoly0053s0017 Marchantia polymorpha HOM05D004609 ORTHO05D005537 4.1e-64 248.8 216 53.2
AL4G25930 Arabidopsis lyrata HOM05D004609 ORTHO05D005537 7.8e-63 244.6 232 56.9
Pp3c1_35360 Physcomitrium patens HOM05D004609 ORTHO05D005537 6.6e-62 241.5 219 53.0
Nitab4.5_0005621g0170 Nicotiana tabacum HOM05D004609 ORTHO05D005537 8.6e-62 241.1 212 61.3
Nitab4.5_0006639g0020 Nicotiana tabacum HOM05D004609 ORTHO05D005537 4.0e-59 232.3 155 75.5
SMO232G0060 Selaginella moellendorffii HOM05D004609 ORTHO05D005537 3.4e-58 229.2 189 58.2
CBR_g359 Chara braunii HOM05D004609 ORTHO05D005537 2.1e-55 219.9 210 54.8
CSS0027878 Camellia sinensis var. sinensis HOM05D004609 ORTHO05D005537 8.6e-54 214.5 172 65.1
CBR_g32631 Chara braunii HOM05D004609 ORTHO05D005537 7.3e-53 211.5 210 52.9
MCO01G111 Micromonas commoda HOM05D004609 ORTHO05D005537 5.2e-51 205.3 200 48.5
SHI25734 Sapria himalayana HOM05D004609 ORTHO05D005537 6.8e-51 204.9 156 65.4
Nitab4.5_0005621g0150 Nicotiana tabacum HOM05D004609 ORTHO05D005537 6.4e-49 198.4 117 81.2
Nitab4.5_0006639g0060 Nicotiana tabacum HOM05D004609 ORTHO05D005537 8.4e-41 171.4 116 75.9
Haze_26358 Corylus avellana HOM05D004609 ORTHO05D005537 1.1e-40 171.0 201 43.8
AT5G60590 Arabidopsis thaliana HOM05D004609 ORTHO05D005537 2.7e-39 166.4 116 70.7
CAN.G604.3 Capsicum annuum HOM05D004609 ORTHO05D005537 4.6e-39 165.6 97 84.5
CSS0039805 Camellia sinensis var. sinensis HOM05D004609 ORTHO05D005537 1.3e-38 164.1 172 52.9
A03p11090 Brassica napus HOM05D004609 ORTHO05D005537 1.9e-37 160.2 108 67.6
BraA03t10423Z Brassica rapa HOM05D004609 ORTHO05D005537 1.9e-37 160.2 108 67.6
CAN.G1153.4 Capsicum annuum HOM05D004609 ORTHO05D005537 2.8e-36 156.4 101 74.3
Nitab4.5_0006639g0090 Nicotiana tabacum HOM05D004609 ORTHO05D005537 8.1e-36 154.8 118 66.9
PRCOL_00000940 Prasinoderma coloniale HOM05D004609 ORTHO05D005537 2.2e-33 146.7 191 45.0
C03p12780 Brassica napus HOM05D004609 ORTHO05D005537 2.5e-29 133.3 230 37.0
AUR62013942 Chenopodium quinoa HOM05D004609 ORTHO05D005537 6.2e-28 128.6 93 68.8
Glyma.12G067902 Glycine max HOM05D004609 ORTHO05D005537 1.6e-23 114.0 104 56.7
BolC3t13744H Brassica oleracea HOM05D004609 ORTHO05D005537 2.3e-22 110.2 232 35.3
Actinidia28417 Actinidia chinensis HOM05D004609 ORTHO05D005537 1.2e-15 87.8 62 71.0
Cre05.g234657 Chlamydomonas reinhardtii HOM05D004609 ORTHO05D005537 2.1e-15 87.0 210 33.3
MCO14G032 Micromonas commoda HOM05D006526 ORTHO05D008496 4.8e-12 75.9 206 28.6
AUR62017074 Chenopodium quinoa HOM05D004609 ORTHO05D005537 8.2e-12 75.1 104 43.3
PRCOL_00005540 Prasinoderma coloniale HOM05D004609 ORTHO05D005537 1.2e-10 71.2 206 28.2
Os08g0531300 Oryza sativa ssp. japonica HOM05D006526 ORTHO05D008496 1.5e-10 70.9 219 29.2
Cre01.g015950 Chlamydomonas reinhardtii HOM05D006526 ORTHO05D008496 5.0e-09 65.9 209 29.2
CsaV3_3G027000 Cucumis sativus L. HOM05D006526 ORTHO05D008496 5.0e-09 65.9 202 29.2
Gohir.D09G036900 Gossypium hirsutum HOM05D006526 ORTHO05D008496 6.5e-09 65.5 205 28.3
Hma1.2p1_1278F.1_g272280 Hydrangea macrophylla HOM05D006526 ORTHO05D008496 8.5e-09 65.1 226 26.5
Zm00001eb175140 Zea mays HOM05D006526 ORTHO05D008496 1.1e-08 64.7 206 26.7
Gorai.006G042000 Gossypium raimondii HOM05D006526 ORTHO05D008496 1.4e-08 64.3 205 28.3
Ca_29294_v3 Cicer arietinum L. HOM05D004609 ORTHO05D005537 2.5e-08 63.5 132 31.1
MELO3C014888.2 Cucumis melo HOM05D006526 ORTHO05D008496 3.2e-08 63.2 202 28.2
Pp3c2_22020 Physcomitrium patens HOM05D006526 ORTHO05D008496 7.2e-08 62.0 222 25.7
SMO137G0097 Selaginella moellendorffii HOM05D006526 ORTHO05D008496 1.6e-07 60.8 190 26.8
ECA238G1207 Erigeron canadensis HOM05D006526 ORTHO05D008496 2.1e-07 60.5 232 25.4
HanXRQChr14g0450751 Helianthus annuus HOM05D006526 ORTHO05D008496 2.7e-07 60.1 147 28.6
Lju41C52G13 Lonicera japonica HOM05D002875 ORTHO05D003215 1.4e-06 57.8 275 23.3
PGR042G1209 Punica granatum HOM05D006526 ORTHO05D008496 1.8e-06 57.4 201 25.9
Cc07_g00840 Coffea canephora HOM05D006526 ORTHO05D008496 3.0e-06 56.6 145 27.6
Lsat_1_v5_gn_2_93080 Lactuca sativa HOM05D006526 ORTHO05D008496 5.1e-06 55.8 146 26.0


User provided reference genes

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