Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002808.1 Olea europaea HOM05D007146 ORTHO05D008971 0.0e+00 1266.1 633 100.0
SalBow8G2846 Salvia bowleyana HOM05D007146 ORTHO05D008971 9.2e-188 661.0 647 56.0
CSS0042492 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 3.3e-185 652.5 643 57.2
CSS0033590 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 2.2e-181 639.8 691 52.8
SGA_v2.0_scaffold186G40227 Striga asiatica HOM05D007146 ORTHO05D008971 6.4e-181 638.3 642 55.8
Sopen07g034520 Solanum pennellii HOM05D007146 ORTHO05D008971 5.4e-180 635.2 638 54.4
PGSC0003DMG401022133 Solanum tuberosum HOM05D007146 ORTHO05D008971 1.2e-179 634.0 638 54.1
Solyc07g066340.3 Solanum lycopersicum HOM05D007146 ORTHO05D008971 3.5e-179 632.5 643 54.3
DCAR_009636 Daucus carota HOM05D007146 ORTHO05D008971 4.3e-177 625.5 665 51.3
CAN.G943.29 Capsicum annuum HOM05D007146 ORTHO05D008971 2.1e-176 623.2 638 53.6
Rhsim06G0237700 Rhododendron simsii HOM05D007146 ORTHO05D008971 3.8e-173 612.5 705 51.6
GSVIVG01020477001 Vitis vinifera HOM05D007146 ORTHO05D008971 7.1e-172 608.2 643 51.9
Peaxi162Scf00232g01133 Petunia axillaris HOM05D007146 ORTHO05D008971 4.6e-171 605.5 636 52.0
vmacro11655 Vaccinium macrocarpon HOM05D007146 ORTHO05D008971 1.5e-169 600.5 722 49.4
Atru.chr2.1879 Acer truncatum HOM05D007146 ORTHO05D008971 2.5e-169 599.7 670 50.6
Cc05_g15970 Coffea canephora HOM05D007146 ORTHO05D008971 4.3e-169 599.0 673 49.9
FvH4_3g16020 Fragaria vesca HOM05D007146 ORTHO05D008971 4.8e-168 595.5 661 49.9
FAN11G2635 Fragaria x ananassa HOM05D007146 ORTHO05D008971 5.3e-167 592.0 661 49.9
Nn7g37748 Nelumbo nucifera HOM05D007146 ORTHO05D008971 3.4e-166 589.3 671 50.7
Potri.007G065300 Populus trichocarpa HOM05D007146 ORTHO05D008971 5.5e-164 582.0 660 50.5
Prupe.4G143400 Prunus persica HOM05D007146 ORTHO05D008971 5.5e-164 582.0 669 50.1
Eucgr.F01450 Eucalyptus grandis HOM05D007146 ORTHO05D008971 7.1e-164 581.6 642 52.0
RcHm_v2.0_Chr5g0027001 Rosa chinensis HOM05D007146 ORTHO05D008971 1.6e-163 580.5 661 49.9
CiPaw.11G069000 Carya illinoinensis HOM05D007146 ORTHO05D008971 1.0e-162 577.8 666 50.0
PGR083G2275 Punica granatum HOM05D007146 ORTHO05D008971 3.0e-162 576.2 635 51.8
Lalb_Chr25g0285151 Lupinus albus HOM05D007146 ORTHO05D008971 2.5e-161 573.2 656 48.8
MD05G1215600 Malus domestica HOM05D007146 ORTHO05D008971 2.5e-161 573.2 669 48.9
Phvul.005G055600 Phaseolus vulgaris HOM05D007146 ORTHO05D008971 2.5e-161 573.2 661 49.2
COL.COLO4_05069 Corchorus olitorius HOM05D007146 ORTHO05D008971 5.6e-161 572.0 664 49.2
Sabra07G0052900 Salix brachista HOM05D007146 ORTHO05D008971 5.6e-161 572.0 658 50.3
TWI38G0129 Tripterygium wilfordii HOM05D007146 ORTHO05D008971 9.6e-161 571.2 648 50.3
Glyma.08G173200 Glycine max HOM05D007146 ORTHO05D008971 2.1e-160 570.1 657 49.0
Gorai.004G269700 Gossypium raimondii HOM05D007146 ORTHO05D008971 2.1e-160 570.1 663 49.0
Aqoxy4G00043_Aqoxy4G00044 Aquilegia oxysepala HOM05D007146 ORTHO05D008971 1.4e-159 567.4 678 47.8
HanXRQChr05g0160631 Helianthus annuus HOM05D007146 ORTHO05D008971 1.4e-159 567.4 626 50.5
Lj3g0000430 Lotus japonicus HOM05D007146 ORTHO05D008971 1.2e-158 564.3 656 48.6
TPR.G9764 Trifolium pratense HOM05D007146 ORTHO05D008971 5.8e-158 562.0 659 48.9
arahy.Tifrunner.gnm1.ann1.L14HV7 Arachis hypogaea HOM05D007146 ORTHO05D008971 7.6e-158 561.6 667 48.0
Medtr2g064450 Medicago truncatula HOM05D007146 ORTHO05D008971 1.3e-157 560.8 663 48.6
THA.LOC104812351 Tarenaya hassleriana HOM05D007146 ORTHO05D008971 1.3e-157 560.8 642 50.2
arahy.Tifrunner.gnm1.ann1.5W7G8A Arachis hypogaea HOM05D007146 ORTHO05D008971 2.2e-157 560.1 667 48.0
Thhalv10007372m.g Eutrema salsugineum HOM05D007146 ORTHO05D008971 1.4e-156 557.4 627 49.6
Sed0009835 Sechium edule HOM05D007146 ORTHO05D008971 2.5e-156 556.6 649 48.7
AL1G28820 Arabidopsis lyrata HOM05D007146 ORTHO05D008971 9.3e-156 554.7 627 49.1
PSO675G2245 Papaver somniferum HOM05D007146 ORTHO05D008971 1.6e-155 553.9 670 47.2
ClCG11G016310 Citrullus lanatus HOM05D007146 ORTHO05D008971 6.0e-155 552.0 659 48.7
C05p14940 Brassica napus HOM05D007146 ORTHO05D008971 1.0e-154 551.2 627 49.0
AT1G16650 Arabidopsis thaliana HOM05D007146 ORTHO05D008971 1.8e-154 550.4 627 48.5
A06p12640 Brassica napus HOM05D007146 ORTHO05D008971 1.8e-154 550.4 627 49.6
BolC5t30209H Brassica oleracea HOM05D007146 ORTHO05D008971 3.0e-154 549.7 627 49.0
Carub.0001s1639 Capsella rubella HOM05D007146 ORTHO05D008971 3.3e-153 546.2 627 48.2
CsaV3_2G022170 Cucumis sativus L. HOM05D007146 ORTHO05D008971 3.3e-153 546.2 649 47.3
BcaC05g25529 Brassica carinata HOM05D007146 ORTHO05D008971 4.3e-153 545.8 634 48.6
Aa31LG7G1140 Aethionema arabicum HOM05D007146 ORTHO05D008971 3.7e-152 542.7 628 48.6
PSO541G2405 Papaver somniferum HOM05D007146 ORTHO05D008971 3.7e-152 542.7 671 46.8
BraA06t24425Z Brassica rapa HOM05D007146 ORTHO05D008971 1.5e-150 537.3 647 47.6
FAN25G2803 Fragaria x ananassa HOM05D007146 ORTHO05D008971 7.6e-150 535.0 638 47.5
Lsat_1_v5_gn_9_46800 Lactuca sativa HOM05D007146 ORTHO05D008971 2.7e-147 526.6 661 47.4
HPP92_018693 Vanilla planifolia HOM05D007146 ORTHO05D008971 6.1e-147 525.4 675 45.6
Gohir.D08G252900 Gossypium hirsutum HOM05D007146 ORTHO05D008971 1.6e-144 517.3 603 48.4
Manes.03G082700 Manihot esculenta HOM05D007146 ORTHO05D008971 1.1e-143 514.6 662 46.7
Nitab4.5_0002933g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 1.4e-143 514.2 629 48.0
FAN21G1125 Fragaria x ananassa HOM05D007146 ORTHO05D008971 3.4e-142 509.6 548 50.2
ATR1098G072 Amborella trichopoda HOM05D007146 ORTHO05D008971 2.5e-140 503.4 670 43.7
VMungo1080G0158 Vigna mungo HOM05D007146 ORTHO05D008971 5.5e-140 502.3 544 50.9
MBI02_g25677_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 1.1e-137 494.6 569 48.5
Nitab4.5_0000313g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 2.6e-137 493.4 413 62.0
MELO3C010557.2 Cucumis melo HOM05D007146 ORTHO05D008971 4.8e-136 489.2 640 45.6
EL10Ac4g08556 Beta vulgaris HOM05D007146 ORTHO05D008971 2.2e-133 480.3 605 46.0
Os12g0610500 Oryza sativa ssp. japonica HOM05D007146 ORTHO05D008971 3.8e-133 479.6 666 42.2
HPP92_018676 Vanilla planifolia HOM05D007146 ORTHO05D008971 1.9e-132 477.2 617 45.4
unitig_749.g13702 Utricularia gibba HOM05D007146 ORTHO05D008971 2.5e-132 476.9 657 45.2
Duzib213G0540 Durio zibethinus HOM05D007146 ORTHO05D008971 3.6e-131 473.0 610 47.2
Migut.M01565 Erythranthe guttata HOM05D007146 ORTHO05D008971 9.1e-127 458.4 341 69.8
Psat1g002520 Pisum sativum HOM05D007146 ORTHO05D008971 4.5e-126 456.1 459 53.4
Zm00001eb135900 Zea mays HOM05D007146 ORTHO05D008971 1.1e-121 441.4 595 45.4
Gohir.A08G232700 Gossypium hirsutum HOM05D007146 ORTHO05D008971 1.2e-115 421.4 547 44.6
MSTRG.16117 Avicennia marina HOM05D007146 ORTHO05D008971 4.7e-107 392.9 289 69.2
Ah.06g187050 Amaranthus hybridus HOM05D007146 ORTHO05D008971 2.8e-104 383.6 486 44.9
Pp3c14_6050 Physcomitrium patens HOM05D007146 ORTHO05D008971 5.4e-95 352.8 640 37.8
Ciclev10021587m.g Citrus clementina HOM05D007146 ORTHO05D008971 2.3e-93 347.4 285 61.4
Pp3c1_21800 Physcomitrium patens HOM05D007146 ORTHO05D008971 3.9e-93 346.7 655 35.3
SMO143G0033 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 5.6e-92 342.8 623 35.5
Lj8C186T10 Lonicera japonica HOM05D007146 ORTHO05D008971 2.1e-91 340.9 417 48.9
Thecc.07G156000 Theobroma cacao HOM05D007146 ORTHO05D008971 2.3e-90 337.4 283 60.4
TAR627G0841 Trochodendron aralioides HOM05D007146 ORTHO05D008971 7.8e-78 295.8 465 42.6
AUR62041925 Chenopodium quinoa HOM05D007146 ORTHO05D008971 3.9e-77 293.5 289 56.4
Sp1g14790 Schrenkiella parvula HOM05D007146 ORTHO05D008971 3.6e-75 287.0 435 42.1
AagrBONN_evm.TU.Sc2ySwM_368.537 Anthoceros agrestis HOM05D007146 ORTHO05D008971 9.9e-73 278.9 520 36.7
Ca_03693_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 1.7e-69 268.1 198 64.1
CDE03G0452 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 2.9e-64 250.8 514 36.4
SEGI_13316 Sequoiadendron giganteum HOM05D007146 ORTHO05D008971 4.5e-57 226.9 242 52.9
Thecc.07G156300 Theobroma cacao HOM05D007146 ORTHO05D008971 1.2e-49 202.2 345 40.0
Hund10273 Selenicereus undatus HOM05D007146 ORTHO05D008971 4.3e-44 183.7 123 65.9
Ciclev10022203m.g Citrus clementina HOM05D007146 ORTHO05D008971 1.6e-38 165.2 265 39.6
CDE03G0405 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 5.1e-37 160.2 130 53.8
CARHR017120 Cardamine hirsuta HOM05D007146 ORTHO05D008971 1.6e-35 155.2 212 48.1
Cpa.g.sc10.33 Carica papaya HOM05D007146 ORTHO05D008971 1.6e-35 155.2 100 68.0
Cpa.g.sc10.30 Carica papaya HOM05D007146 ORTHO05D008971 6.3e-35 153.3 196 48.5
Ca_03695_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 7.6e-33 146.4 244 37.7
Ca_03700_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 7.6e-33 146.4 244 37.7
DCAR_002379 Daucus carota HOM05D007146 ORTHO05D008971 1.0e-32 146.0 265 37.0
Ah.06g187020 Amaranthus hybridus HOM05D007146 ORTHO05D008971 1.1e-28 132.5 220 39.1
Hund10306 Selenicereus undatus HOM05D007146 ORTHO05D008971 8.2e-27 126.3 151 49.7
Sc07g0003080 Simmondsia chinensis HOM05D007146 ORTHO05D008971 1.5e-20 105.5 171 38.6
SMO246G0022 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 2.0e-12 78.6 98 48.0
Haze_08528 Corylus avellana HOM05D007146 ORTHO05D008971 1.3e-08 65.9 132 34.1
MBI02_g40068_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 1.2e-06 59.3 148 28.4


User provided reference genes

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