Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002796.1 Olea europaea HOM05D003670 ORTHO05D004767 3.5e-194 681.4 339 100.0
Migut.H01671 Erythranthe guttata HOM05D003670 ORTHO05D004767 1.0e-164 583.6 335 84.5
CSS0006756 Camellia sinensis var. sinensis HOM05D003670 ORTHO05D004767 3.9e-161 571.6 337 81.6
Rhsim06G0242300 Rhododendron simsii HOM05D003670 ORTHO05D004767 1.3e-159 566.6 334 81.4
Nitab4.5_0006241g0010 Nicotiana tabacum HOM05D003670 ORTHO05D004767 1.7e-159 566.2 335 79.4
ECA236G3562 Erigeron canadensis HOM05D003670 ORTHO05D004767 2.8e-159 565.5 318 84.0
Hma1.2p1_0151F.1_g067325 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 4.8e-159 564.7 328 81.1
Cc05_g16310 Coffea canephora HOM05D003670 ORTHO05D004767 6.3e-159 564.3 334 81.1
Gohir.D13G127300 Gossypium hirsutum HOM05D003670 ORTHO05D004767 1.1e-158 563.5 329 80.5
MSTRG.14566 Avicennia marina HOM05D003670 ORTHO05D004767 1.4e-158 563.1 333 80.8
Gohir.A13G123400 Gossypium hirsutum HOM05D003670 ORTHO05D004767 7.0e-158 560.8 329 79.9
Gorai.013G142500 Gossypium raimondii HOM05D003670 ORTHO05D004767 7.0e-158 560.8 330 80.6
Nitab4.5_0000029g0340 Nicotiana tabacum HOM05D003670 ORTHO05D004767 1.6e-157 559.7 335 78.8
Lsat_1_v5_gn_7_110680 Lactuca sativa HOM05D003670 ORTHO05D004767 2.0e-157 559.3 333 80.5
PGSC0003DMG400022232 Solanum tuberosum HOM05D003670 ORTHO05D004767 2.0e-157 559.3 335 78.8
PGR031G1669 Punica granatum HOM05D003670 ORTHO05D004767 4.5e-157 558.1 332 79.2
GSVIVG01036786001 Vitis vinifera HOM05D003670 ORTHO05D004767 4.5e-157 558.1 330 80.3
Manes.06G175700 Manihot esculenta HOM05D003670 ORTHO05D004767 1.3e-156 556.6 333 78.7
Solyc07g066580.3 Solanum lycopersicum HOM05D003670 ORTHO05D004767 1.3e-156 556.6 335 79.4
Sopen07g034740 Solanum pennellii HOM05D003670 ORTHO05D004767 1.3e-156 556.6 335 79.4
COL.COLO4_32264 Corchorus olitorius HOM05D003670 ORTHO05D004767 1.7e-156 556.2 337 78.3
HanXRQChr11g0335601 Helianthus annuus HOM05D003670 ORTHO05D004767 1.7e-156 556.2 334 79.9
Duzib187G0441 Durio zibethinus HOM05D003670 ORTHO05D004767 3.8e-156 555.1 318 81.1
Potri.007G069300 Populus trichocarpa HOM05D003670 ORTHO05D004767 5.0e-156 554.7 333 79.3
Nn7g37780 Nelumbo nucifera HOM05D003670 ORTHO05D004767 6.5e-156 554.3 324 80.9
MBI02_g18168_MAGBIO Magnolia biondii HOM05D003670 ORTHO05D004767 1.1e-155 553.5 330 80.0
Peaxi162Scf00452g00333 Petunia axillaris HOM05D003670 ORTHO05D004767 1.1e-155 553.5 336 77.1
TPR.G33813 Trifolium pratense HOM05D003670 ORTHO05D004767 1.1e-155 553.5 325 80.0
CiPaw.11G061900 Carya illinoinensis HOM05D003670 ORTHO05D004767 1.5e-155 553.1 333 78.7
CAN.G943.51 Capsicum annuum HOM05D003670 ORTHO05D004767 2.5e-155 552.4 334 77.8
TWI39G0091 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 2.5e-155 552.4 318 81.8
Lj3g0014239 Lotus japonicus HOM05D003670 ORTHO05D004767 3.2e-155 552.0 319 80.6
TAR583G0001 Trochodendron aralioides HOM05D003670 ORTHO05D004767 3.2e-155 552.0 329 79.0
Ciclev10005196m.g Citrus clementina HOM05D003670 ORTHO05D004767 4.2e-155 551.6 320 82.5
Medtr2g067080 Medicago truncatula HOM05D003670 ORTHO05D004767 5.5e-155 551.2 329 79.0
Thecc.07G180400 Theobroma cacao HOM05D003670 ORTHO05D004767 2.7e-154 548.9 333 78.7
ATR0763G120 Amborella trichopoda HOM05D003670 ORTHO05D004767 6.1e-154 547.7 337 78.3
Ca_03600_v3 Cicer arietinum L. HOM05D003670 ORTHO05D004767 6.1e-154 547.7 328 79.0
MD05G1228000 Malus domestica HOM05D003670 ORTHO05D004767 8.0e-154 547.4 335 78.2
Manes.14G010300 Manihot esculenta HOM05D003670 ORTHO05D004767 1.4e-153 546.6 332 78.3
Peaxi162Scf00006g00159 Petunia axillaris HOM05D003670 ORTHO05D004767 1.8e-153 546.2 335 76.7
QL04p088520 Quercus lobata HOM05D003670 ORTHO05D004767 2.3e-153 545.8 359 73.0
TWI38G1711 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 4.0e-153 545.0 317 80.8
PSO675G6901 Papaver somniferum HOM05D003670 ORTHO05D004767 6.7e-153 544.3 338 77.8
PSO541G1524 Papaver somniferum HOM05D003670 ORTHO05D004767 8.8e-153 543.9 338 78.1
Nitab4.5_0005765g0040 Nicotiana tabacum HOM05D003670 ORTHO05D004767 1.2e-152 543.5 335 78.5
Eucgr.F04458 Eucalyptus grandis HOM05D003670 ORTHO05D004767 4.4e-152 541.6 318 79.9
Prupe.4G134300 Prunus persica HOM05D003670 ORTHO05D004767 4.4e-152 541.6 333 76.0
Psat1g013760 Pisum sativum HOM05D003670 ORTHO05D004767 7.5e-152 540.8 327 77.4
FvH4_3g14990 Fragaria vesca HOM05D003670 ORTHO05D004767 1.3e-151 540.0 328 77.4
FAN11G2825 Fragaria x ananassa HOM05D003670 ORTHO05D004767 2.2e-151 539.3 328 77.4
Phvul.005G050400 Phaseolus vulgaris HOM05D003670 ORTHO05D004767 2.2e-151 539.3 327 78.3
unitig_578.g16333 Utricularia gibba HOM05D003670 ORTHO05D004767 2.2e-151 539.3 328 76.5
Glyma.08G167100 Glycine max HOM05D003670 ORTHO05D004767 6.3e-151 537.7 327 77.1
RcHm_v2.0_Chr5g0024611 Rosa chinensis HOM05D003670 ORTHO05D004767 6.3e-151 537.7 332 77.7
FAN21G1395 Fragaria x ananassa HOM05D003670 ORTHO05D004767 8.2e-151 537.3 328 77.1
FAN25G1710 Fragaria x ananassa HOM05D003670 ORTHO05D004767 1.1e-150 537.0 328 76.8
Sp5g34280 Schrenkiella parvula HOM05D003670 ORTHO05D004767 1.4e-150 536.6 336 74.4
MD10G1208500 Malus domestica HOM05D003670 ORTHO05D004767 1.8e-150 536.2 335 76.1
AL2G39700 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 2.4e-150 535.8 336 73.5
CANSAT80G2697 Cannabis sativa HOM05D003670 ORTHO05D004767 3.1e-150 535.4 320 78.4
VMungo1080G1660 Vigna mungo HOM05D003670 ORTHO05D004767 3.1e-150 535.4 327 77.4
EL10Ac2g03264 Beta vulgaris HOM05D003670 ORTHO05D004767 7.0e-150 534.3 312 78.8
CARHR072860 Cardamine hirsuta HOM05D003670 ORTHO05D004767 9.1e-150 533.9 319 76.2
Lalb_Chr25g0284691 Lupinus albus HOM05D003670 ORTHO05D004767 9.1e-150 533.9 320 78.4
Aa31LG4G1790 Aethionema arabicum HOM05D003670 ORTHO05D004767 1.6e-149 533.1 315 77.8
Sabra07G0056700 Salix brachista HOM05D003670 ORTHO05D004767 1.6e-149 533.1 332 76.2
CsaV3_3G018980 Cucumis sativus L. HOM05D003670 ORTHO05D004767 2.0e-149 532.7 318 77.4
Aqoxy1G01484 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 5.9e-149 531.2 333 75.4
Thhalv10018699m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 5.9e-149 531.2 320 75.9
Potri.005G095300 Populus trichocarpa HOM05D003670 ORTHO05D004767 1.7e-148 529.6 307 80.1
vmacro11699 Vaccinium macrocarpon HOM05D003670 ORTHO05D004767 2.2e-148 529.3 363 72.5
AUR62037644 Chenopodium quinoa HOM05D003670 ORTHO05D004767 3.8e-148 528.5 308 78.6
Sopen02g023800 Solanum pennellii HOM05D003670 ORTHO05D004767 6.5e-148 527.7 321 76.9
BcaB02g07206 Brassica carinata HOM05D003670 ORTHO05D004767 8.5e-148 527.3 331 73.4
AT1G79230 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 1.1e-147 526.9 336 72.3
BcaC08g45368 Brassica carinata HOM05D003670 ORTHO05D004767 1.5e-147 526.6 322 75.2
C06p30000 Brassica napus HOM05D003670 ORTHO05D004767 1.5e-147 526.6 322 75.2
BolC6t38160H Brassica oleracea HOM05D003670 ORTHO05D004767 1.5e-147 526.6 322 75.2
Ah.10g033690 Amaranthus hybridus HOM05D003670 ORTHO05D004767 1.9e-147 526.2 349 72.5
BraA07t31943Z Brassica rapa HOM05D003670 ORTHO05D004767 3.2e-147 525.4 320 74.1
Carub.0002s2610 Capsella rubella HOM05D003670 ORTHO05D004767 3.2e-147 525.4 336 72.6
THA.LOC104812362 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 3.2e-147 525.4 315 75.6
Solyc02g078990.4 Solanum lycopersicum HOM05D003670 ORTHO05D004767 4.2e-147 525.0 333 74.2
CARHR016930 Cardamine hirsuta HOM05D003670 ORTHO05D004767 5.5e-147 524.6 332 72.6
A07p44350 Brassica napus HOM05D003670 ORTHO05D004767 1.2e-146 523.5 320 73.8
AUR62039184 Chenopodium quinoa HOM05D003670 ORTHO05D004767 1.6e-146 523.1 322 75.5
A07p27230 Brassica napus HOM05D003670 ORTHO05D004767 2.1e-146 522.7 322 74.5
BraA07t30367Z Brassica rapa HOM05D003670 ORTHO05D004767 2.1e-146 522.7 322 74.5
THA.LOC104813608 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 4.7e-146 521.5 309 76.7
BcaB05g25180 Brassica carinata HOM05D003670 ORTHO05D004767 1.0e-145 520.4 318 76.4
Oeu043724.2 Olea europaea HOM05D003670 ORTHO05D004767 2.3e-145 519.2 322 76.7
Carub.0001s1620 Capsella rubella HOM05D003670 ORTHO05D004767 6.8e-145 517.7 329 71.7
Zm00001eb031400 Zea mays HOM05D003670 ORTHO05D004767 6.8e-145 517.7 333 72.7
BolC5t30186H Brassica oleracea HOM05D003670 ORTHO05D004767 1.5e-144 516.5 317 73.8
HPP92_013192 Vanilla planifolia HOM05D003670 ORTHO05D004767 2.0e-144 516.2 333 72.4
Os12g0608600 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 2.6e-144 515.8 320 75.0
Sed0012107 Sechium edule HOM05D003670 ORTHO05D004767 3.4e-144 515.4 318 75.5
Thhalv10007910m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 4.4e-144 515.0 321 72.9
C05p14650 Brassica napus HOM05D003670 ORTHO05D004767 1.3e-143 513.5 317 73.5
BcaC05g25571 Brassica carinata HOM05D003670 ORTHO05D004767 1.7e-143 513.1 317 73.5
Cfa022976 Carpinus fangiana HOM05D003670 ORTHO05D004767 2.4e-142 509.2 333 73.6
BraA06t24401Z Brassica rapa HOM05D003670 ORTHO05D004767 1.6e-141 506.5 317 73.2
Sabra05G0078800 Salix brachista HOM05D003670 ORTHO05D004767 3.5e-141 505.4 331 72.2
MSTRG.7076 Avicennia marina HOM05D003670 ORTHO05D004767 1.0e-140 503.8 322 73.0
Aa31LG7G1000 Aethionema arabicum HOM05D003670 ORTHO05D004767 1.7e-140 503.1 319 70.8
BcaB02g06624 Brassica carinata HOM05D003670 ORTHO05D004767 1.7e-140 503.1 321 71.3
SGA_v2.0_scaffold186G40197 Striga asiatica HOM05D003670 ORTHO05D004767 6.5e-140 501.1 306 74.8
AL1G28600 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 4.2e-139 498.4 321 70.7
A06p12380 Brassica napus HOM05D003670 ORTHO05D004767 7.2e-139 497.7 313 71.6
Sp1g14610 Schrenkiella parvula HOM05D003670 ORTHO05D004767 7.2e-139 497.7 323 70.0
DCAR_019919 Daucus carota HOM05D003670 ORTHO05D004767 1.2e-138 496.9 333 73.3
Hund20101 Selenicereus undatus HOM05D003670 ORTHO05D004767 2.8e-138 495.7 322 73.3
unitig_8.g4750 Utricularia gibba HOM05D003670 ORTHO05D004767 5.2e-137 491.5 331 72.8
Sc06g0002800 Simmondsia chinensis HOM05D003670 ORTHO05D004767 1.5e-136 490.0 294 78.6
Duzib213G1009 Durio zibethinus HOM05D003670 ORTHO05D004767 4.4e-136 488.4 339 71.1
Glyma.15G260300 Glycine max HOM05D003670 ORTHO05D004767 4.1e-134 481.9 296 77.0
AT1G16460 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 7.0e-134 481.1 314 70.1
arahy.Tifrunner.gnm1.ann1.36F1KB Arachis hypogaea HOM05D003670 ORTHO05D004767 4.5e-133 478.4 296 79.1
ClCG05G009800 Citrullus lanatus HOM05D003670 ORTHO05D000003 1.7e-132 476.5 332 69.3
SEGI_21826 Sequoiadendron giganteum HOM05D003670 ORTHO05D004767 6.8e-129 464.5 322 68.6
arahy.Tifrunner.gnm1.ann1.YZ7E83 Arachis hypogaea HOM05D003670 ORTHO05D004767 1.7e-127 459.9 296 77.0
Lj2A15G76 Lonicera japonica HOM05D003670 ORTHO05D004767 1.7e-127 459.9 303 76.2
Nitab4.5_0000388g0140 Nicotiana tabacum HOM05D003670 ORTHO05D004767 6.0e-125 451.4 280 78.9
DCAR_016837 Daucus carota HOM05D003670 ORTHO05D004767 6.6e-124 448.0 293 70.3
C06p53140 Brassica napus HOM05D003670 ORTHO05D004767 2.8e-122 442.6 257 77.8
BolC6t40330H Brassica oleracea HOM05D003670 ORTHO05D004767 2.8e-122 442.6 257 77.8
MELO3C019489.2 Cucumis melo HOM05D003670 ORTHO05D004767 4.0e-121 438.7 265 77.7
BcaC08g47490 Brassica carinata HOM05D003670 ORTHO05D004767 5.2e-121 438.3 323 65.0
SGA_v2.0_scaffold49G18190 Striga asiatica HOM05D003670 ORTHO05D004767 4.9e-119 431.8 279 76.3
Os02g0167100 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 1.9e-118 429.9 292 65.8
QL04p088965 Quercus lobata HOM05D003670 ORTHO05D004767 2.4e-118 429.5 241 83.0
Mapoly0058s0078 Marchantia polymorpha HOM05D003670 ORTHO05D004767 8.9e-113 411.0 318 58.5
AagrBONN_evm.TU.Sc2ySwM_344.5346 Anthoceros agrestis HOM05D003670 ORTHO05D004767 1.7e-111 406.8 321 59.5
Zm00001eb207410 Zea mays HOM05D003670 ORTHO05D004767 2.9e-111 406.0 325 57.5
Dinv19592 Davidia involucrata HOM05D003670 ORTHO05D004767 1.4e-110 403.7 263 76.4
Haze_07818 Corylus avellana HOM05D003670 ORTHO05D004767 5.1e-108 395.2 282 71.3
HPP92_013209 Vanilla planifolia HOM05D003670 ORTHO05D004767 8.9e-105 384.4 333 59.5
Pp3c9_17670 Physcomitrium patens HOM05D003670 ORTHO05D004767 1.5e-104 383.6 337 53.4
SMO119G0061 Selaginella moellendorffii HOM05D003670 ORTHO05D004767 3.5e-101 372.5 293 60.1
CDE06G2006 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 1.7e-100 370.2 234 71.8
Rhsim05G0210500 Rhododendron simsii HOM05D003670 ORTHO05D004767 2.5e-99 366.3 241 74.7
MD05G1228700 Malus domestica HOM05D003670 ORTHO05D004767 9.6e-91 337.8 198 79.3
FAN16G2550 Fragaria x ananassa HOM05D003670 ORTHO05D004767 1.4e-89 334.0 196 78.1
CDE02G0962 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 2.0e-88 330.1 234 66.2
Cpa.g.sc34.17 Carica papaya HOM05D003670 ORTHO05D004767 1.6e-85 320.5 226 69.9
Actinidia12766 Actinidia chinensis HOM05D003670 ORTHO05D004767 3.3e-83 312.8 191 80.6
A02p22680 Brassica napus HOM05D003670 ORTHO05D004767 7.1e-70 268.5 365 43.3
RcHm_v2.0_Chr5g0024731 Rosa chinensis HOM05D003670 ORTHO05D004767 9.3e-70 268.1 210 66.7
C02p36310 Brassica napus HOM05D003670 ORTHO05D004767 3.9e-68 262.7 221 61.1
MCO09G588 Micromonas commoda HOM05D003670 ORTHO05D004767 1.9e-67 260.4 299 47.8
CBR_g17038 Chara braunii HOM05D003670 ORTHO05D004767 2.5e-67 260.0 358 40.2
PRCOL_00006295 Prasinoderma coloniale HOM05D003670 ORTHO05D004767 1.8e-65 253.8 304 44.7
Cre13.g607050 Chlamydomonas reinhardtii HOM05D003670 ORTHO05D004767 2.0e-64 250.4 301 41.9
Hma1.2p1_0269F.1_g107810 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 1.7e-50 204.1 153 68.6
Aqoxy1G03000 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 1.4e-49 201.1 114 80.7
Cfa026738 Carpinus fangiana HOM05D003670 ORTHO05D004767 1.6e-40 171.0 323 35.3
MD05G1228600 Malus domestica HOM05D003670 ORTHO05D004767 6.1e-37 159.1 133 63.2
C03p82980 Brassica napus HOM05D003670 ORTHO05D004767 5.7e-35 152.5 94 80.9
BcaC01g00674 Brassica carinata HOM05D003670 ORTHO05D004767 9.7e-35 151.8 92 81.5
CAN.G891.1 Capsicum annuum HOM05D003670 ORTHO05D004767 1.3e-34 151.4 94 78.7
BolC1t01654H Brassica oleracea HOM05D003670 ORTHO05D004767 1.7e-34 151.0 131 61.8
BcaC04g18607 Brassica carinata HOM05D003670 ORTHO05D004767 1.1e-33 148.3 92 79.3
C01p17180 Brassica napus HOM05D003670 ORTHO05D004767 1.1e-33 148.3 131 61.1
BolC9t58925H Brassica oleracea HOM05D003670 ORTHO05D004767 9.1e-33 145.2 131 59.5
Oeu010650.2 Olea europaea HOM05D003670 ORTHO05D004767 2.0e-32 144.1 97 80.4
Oeu034061.1 Olea europaea HOM05D003670 ORTHO05D020012 8.5e-31 138.7 77 85.7
Cpa.g.sc34.16 Carica papaya HOM05D003670 ORTHO05D004767 1.4e-28 131.3 75 78.7
Lsat_1_v5_gn_4_93521 Lactuca sativa HOM05D003670 ORTHO05D004767 7.5e-27 125.6 66 87.9
Mapoly0032s0014 Marchantia polymorpha HOM05D003670 ORTHO05D031137 1.2e-24 118.2 330 27.3
CDE06G0877 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 1.9e-22 110.9 63 74.6
BcaC06g34801 Brassica carinata HOM05D003670 ORTHO05D004767 2.8e-21 107.1 92 64.1
BolC7t42971H Brassica oleracea HOM05D003670 ORTHO05D004767 2.8e-21 107.1 133 47.4
Solyc06g009850.3 Solanum lycopersicum HOM05D003670 ORTHO05D014971 8.0e-21 105.5 116 51.7
BcaC03g15876 Brassica carinata HOM05D003670 ORTHO05D020012 2.8e-18 97.1 63 68.3
BcaC05g28269 Brassica carinata HOM05D003670 ORTHO05D014971 8.6e-15 85.5 51 76.5
AagrBONN_evm.TU.Sc2ySwM_117.2139 Anthoceros agrestis HOM05D003670 ORTHO05D031137 1.2e-13 81.6 248 28.6
Solyc06g009860.1 Solanum lycopersicum HOM05D003670 ORTHO05D020012 6.8e-12 75.9 46 71.7
BcaC02g07679 Brassica carinata HOM05D003670 ORTHO05D014971 4.4e-11 73.2 41 80.5
Sopen06g004510 Solanum pennellii HOM05D003670 ORTHO05D014971 5.8e-11 72.8 45 75.6
C06p40160 Brassica napus HOM05D003670 ORTHO05D020012 8.3e-10 68.9 39 74.4
BolC6t39098H Brassica oleracea HOM05D003670 ORTHO05D020012 8.3e-10 68.9 39 74.4
QL04p088979 Quercus lobata HOM05D003670 ORTHO05D004767 1.6e-08 64.7 56 58.9
Lsat_1_v5_gn_8_160501 Lactuca sativa HOM05D003670 ORTHO05D002209 3.0e-07 60.5 33 87.9


User provided reference genes

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