Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002771.1 Olea europaea HOM05D004406 ORTHO05D005660 5.0e-279 963.8 478 100.0
Oeu044427.1 Olea europaea HOM05D004406 ORTHO05D005660 5.3e-236 820.8 535 78.7
MSTRG.6706 Avicennia marina HOM05D004406 ORTHO05D005660 1.4e-228 796.2 452 85.0
Lj1C808G13 Lonicera japonica HOM05D004406 ORTHO05D005660 1.5e-219 766.1 453 82.8
CSS0020755 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 1.7e-218 762.7 460 81.3
Migut.M00660 Erythranthe guttata HOM05D004406 ORTHO05D005660 1.1e-217 760.0 452 82.5
Dinv26661 Davidia involucrata HOM05D004406 ORTHO05D005660 1.8e-215 752.7 455 81.3
Cc05_g10180 Coffea canephora HOM05D004406 ORTHO05D005660 4.8e-213 744.6 452 79.6
Cfa019935 Carpinus fangiana HOM05D004406 ORTHO05D005660 1.5e-211 739.6 453 79.7
Peaxi162Scf00003g04835 Petunia axillaris HOM05D004406 ORTHO05D005660 2.0e-211 739.2 459 79.1
TAR628G1650 Trochodendron aralioides HOM05D004406 ORTHO05D005660 1.0e-210 736.9 466 77.3
TAR376G0792 Trochodendron aralioides HOM05D004406 ORTHO05D005660 2.2e-210 735.7 460 77.4
TWI38G2065 Tripterygium wilfordii HOM05D004406 ORTHO05D005660 3.8e-210 734.9 451 78.3
Actinidia18837 Actinidia chinensis HOM05D004406 ORTHO05D005660 6.5e-210 734.2 460 79.1
FAN21G0297 Fragaria x ananassa HOM05D004406 ORTHO05D005660 1.4e-209 733.0 452 77.4
FvH4_3g16570 Fragaria vesca HOM05D004406 ORTHO05D005660 3.2e-209 731.9 452 77.7
Ca_03669_v3 Cicer arietinum L. HOM05D004406 ORTHO05D005660 4.2e-209 731.5 450 78.9
Prupe.4G148400 Prunus persica HOM05D004406 ORTHO05D005660 4.2e-209 731.5 452 78.5
CiPaw.01G106500 Carya illinoinensis HOM05D004406 ORTHO05D005660 5.5e-209 731.1 452 78.3
FAN11G0596 Fragaria x ananassa HOM05D004406 ORTHO05D005660 7.2e-209 730.7 452 77.4
FAN25G0744 Fragaria x ananassa HOM05D004406 ORTHO05D005660 1.2e-208 729.9 452 77.7
MD05G1209100 Malus domestica HOM05D004406 ORTHO05D005660 4.6e-208 728.0 452 78.1
Lj3g0010925 Lotus japonicus HOM05D004406 ORTHO05D005660 7.9e-208 727.2 452 77.4
HanXRQChr11g0329941 Helianthus annuus HOM05D004406 ORTHO05D005660 1.4e-207 726.5 452 78.5
RcHm_v2.0_Chr5g0027601 Rosa chinensis HOM05D004406 ORTHO05D005660 2.3e-207 725.7 452 77.9
PGSC0003DMG400008359 Solanum tuberosum HOM05D004406 ORTHO05D005660 6.7e-207 724.2 458 77.9
GSVIVG01009332001 Vitis vinifera HOM05D004406 ORTHO05D005660 8.8e-207 723.8 460 76.7
COL.COLO4_35795 Corchorus olitorius HOM05D004406 ORTHO05D005660 2.0e-206 722.6 452 77.9
VMungo1080G1685 Vigna mungo HOM05D004406 ORTHO05D005660 2.0e-206 722.6 465 76.1
Manes.10G061001 Manihot esculenta HOM05D004406 ORTHO05D005660 3.3e-206 721.8 451 77.4
arahy.Tifrunner.gnm1.ann1.L0EV17 Arachis hypogaea HOM05D004406 ORTHO05D005660 4.3e-206 721.5 458 76.2
Sopen10g029140 Solanum pennellii HOM05D004406 ORTHO05D005660 4.3e-206 721.5 458 77.5
Thecc.01G135800 Theobroma cacao HOM05D004406 ORTHO05D005660 4.3e-206 721.5 452 78.1
Solyc10g078480.2 Solanum lycopersicum HOM05D004406 ORTHO05D005660 9.7e-206 720.3 458 77.5
Ciclev10001005m.g Citrus clementina HOM05D004406 ORTHO05D005660 2.2e-205 719.2 457 77.2
Glyma.15G256700 Glycine max HOM05D004406 ORTHO05D005660 2.2e-205 719.2 452 76.5
Medtr2g069330 Medicago truncatula HOM05D004406 ORTHO05D005660 2.2e-205 719.2 452 75.9
Nn5g30617 Nelumbo nucifera HOM05D004406 ORTHO05D005660 2.2e-205 719.2 460 75.9
Lalb_Chr25g0284911 Lupinus albus HOM05D004406 ORTHO05D005660 2.4e-204 715.7 452 77.0
Phvul.005G057900 Phaseolus vulgaris HOM05D004406 ORTHO05D005660 2.4e-204 715.7 452 76.8
ECA236G4460 Erigeron canadensis HOM05D004406 ORTHO05D005660 4.1e-204 714.9 463 76.0
Psat1g012120 Pisum sativum HOM05D004406 ORTHO05D005660 1.2e-203 713.4 452 75.7
Eucgr.F01412 Eucalyptus grandis HOM05D004406 ORTHO05D005660 3.4e-203 711.8 451 76.7
Hund02309 Selenicereus undatus HOM05D004406 ORTHO05D005660 4.5e-203 711.4 451 76.3
CAN.G960.55 Capsicum annuum HOM05D004406 ORTHO05D005660 7.7e-203 710.7 458 77.3
Gorai.007G217900 Gossypium raimondii HOM05D004406 ORTHO05D005660 7.7e-203 710.7 452 76.5
Gohir.D11G203200 Gossypium hirsutum HOM05D004406 ORTHO05D005660 1.0e-202 710.3 452 76.5
Sc03g0007790 Simmondsia chinensis HOM05D004406 ORTHO05D005660 2.2e-202 709.1 452 77.4
Atru.chr9.1518 Acer truncatum HOM05D004406 ORTHO05D005660 3.8e-202 708.4 452 76.8
Potri.001G394300 Populus trichocarpa HOM05D004406 ORTHO05D005660 5.0e-202 708.0 450 77.3
MD10G1195500 Malus domestica HOM05D004406 ORTHO05D005660 8.5e-202 707.2 434 78.8
Cpa.g.sc132.61 Carica papaya HOM05D004406 ORTHO05D005660 1.1e-201 706.8 454 76.2
unitig_62.g23080 Utricularia gibba HOM05D004406 ORTHO05D005660 1.4e-201 706.4 452 76.1
Gohir.A11G220400 Gossypium hirsutum HOM05D004406 ORTHO05D005660 6.1e-200 701.0 452 75.7
QL04p076605 Quercus lobata HOM05D004406 ORTHO05D005660 6.1e-200 701.0 434 78.1
Nitab4.5_0006279g0030 Nicotiana tabacum HOM05D004406 ORTHO05D005660 3.9e-199 698.4 462 76.0
vmacro15158 Vaccinium macrocarpon HOM05D004406 ORTHO05D005660 1.1e-198 696.8 424 79.5
Aqoxy6G02573 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 1.5e-198 696.4 457 73.5
vmacro12019 Vaccinium macrocarpon HOM05D004406 ORTHO05D005660 1.1e-196 690.3 432 77.5
Sed0020103 Sechium edule HOM05D004406 ORTHO05D005660 1.4e-196 689.9 453 75.1
Aqoxy6G03019 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 5.3e-196 688.0 458 72.5
PSO170G0587 Papaver somniferum HOM05D004406 ORTHO05D005660 7.0e-196 687.6 452 74.6
Dinv13306 Davidia involucrata HOM05D004406 ORTHO05D005660 9.1e-196 687.2 414 81.6
CANSAT25G0941 Cannabis sativa HOM05D004406 ORTHO05D005660 2.0e-195 686.0 453 74.2
SGA_v2.0_scaffold73G24357 Striga asiatica HOM05D004406 ORTHO05D005660 2.6e-195 685.6 459 74.5
EL10Ac9g22869 Beta vulgaris HOM05D004406 ORTHO05D005660 2.9e-194 682.2 451 73.4
PSO528G0243 Papaver somniferum HOM05D004406 ORTHO05D005660 2.9e-194 682.2 452 73.7
FAN16G0888 Fragaria x ananassa HOM05D004406 ORTHO05D005660 8.0e-192 674.1 468 71.6
arahy.Tifrunner.gnm1.ann1.BTSV3Q Arachis hypogaea HOM05D004406 ORTHO05D005660 4.0e-191 671.8 458 73.1
PGR004G1399 Punica granatum HOM05D004406 ORTHO05D005660 5.2e-191 671.4 445 74.2
SalBow5G0012 Salvia bowleyana HOM05D004406 ORTHO05D005660 1.7e-189 666.4 519 68.2
Haze_15516 Corylus avellana HOM05D004406 ORTHO05D005660 2.8e-189 665.6 462 71.9
Nitab4.5_0000812g0150 Nicotiana tabacum HOM05D004406 ORTHO05D005660 2.8e-189 665.6 463 72.8
ClCG03G009170 Citrullus lanatus HOM05D004406 ORTHO05D005660 3.5e-187 658.7 445 73.0
ATR0739G109 Amborella trichopoda HOM05D004406 ORTHO05D005660 6.5e-186 654.4 451 70.5
CsaV3_5G023450 Cucumis sativus L. HOM05D004406 ORTHO05D005660 2.5e-185 652.5 454 72.5
AUR62017618 Chenopodium quinoa HOM05D004406 ORTHO05D005660 2.7e-184 649.0 425 72.9
DCAR_013800 Daucus carota HOM05D004406 ORTHO05D005660 3.6e-184 648.7 459 72.8
MELO3C022781.2 Cucumis melo HOM05D004406 ORTHO05D005660 4.7e-184 648.3 453 71.7
THA.LOC104808122 Tarenaya hassleriana HOM05D004406 ORTHO05D005660 9.8e-182 640.6 452 71.5
Duzib187G2008 Durio zibethinus HOM05D004406 ORTHO05D005660 2.8e-181 639.0 452 71.5
SalBow5G1666 Salvia bowleyana HOM05D004406 ORTHO05D005660 1.1e-180 637.1 419 76.4
C05p14870 Brassica napus HOM05D004406 ORTHO05D005660 3.1e-180 635.6 452 70.4
Aa31LG7G1110 Aethionema arabicum HOM05D004406 ORTHO05D005660 1.7e-178 629.8 455 69.9
BolC5t30202H Brassica oleracea HOM05D004406 ORTHO05D005660 5.0e-178 628.2 452 69.7
A06p12560 Brassica napus HOM05D004406 ORTHO05D005660 2.5e-177 625.9 452 69.9
CDE06G1959 Ceratophyllum demersum HOM05D004406 ORTHO05D005660 9.4e-177 624.0 479 66.0
SEGI_06613 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 1.6e-176 623.2 496 63.3
AL1G28740 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 3.6e-176 622.1 452 69.5
Thhalv10007520m.g Eutrema salsugineum HOM05D004406 ORTHO05D005660 4.7e-176 621.7 452 69.7
BraA06t24419Z Brassica rapa HOM05D004406 ORTHO05D005660 6.1e-176 621.3 452 69.5
Aqoxy113s002 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 2.3e-175 619.4 394 74.9
BolC8t51983H Brassica oleracea HOM05D004406 ORTHO05D005660 2.3e-175 619.4 452 69.7
AT1G16570 Arabidopsis thaliana HOM05D004406 ORTHO05D005660 3.0e-175 619.0 452 69.0
CARHR017050 Cardamine hirsuta HOM05D004406 ORTHO05D005660 3.0e-175 619.0 452 68.8
A09p60830 Brassica napus HOM05D004406 ORTHO05D005660 4.0e-175 618.6 452 69.5
BraA09t41456Z Brassica rapa HOM05D004406 ORTHO05D005660 4.0e-175 618.6 452 69.5
C08p44420 Brassica napus HOM05D004406 ORTHO05D005660 8.8e-175 617.5 452 69.5
Sp1g14730 Schrenkiella parvula HOM05D004406 ORTHO05D005660 2.0e-174 616.3 452 69.2
Carub.0001s1633 Capsella rubella HOM05D004406 ORTHO05D005660 2.2e-173 612.8 452 68.4
Zm00001eb401770 Zea mays HOM05D004406 ORTHO05D005660 8.3e-173 610.9 451 67.6
Os03g0180700 Oryza sativa ssp. japonica HOM05D004406 ORTHO05D005660 1.4e-172 610.1 452 67.7
HPP92_025666 Vanilla planifolia HOM05D004406 ORTHO05D005660 3.1e-172 609.0 453 66.4
Gohir.A09G004700 Gossypium hirsutum HOM05D004406 ORTHO05D005660 1.3e-170 603.6 452 68.4
Glyma.08G170200 Glycine max HOM05D004406 ORTHO05D005660 2.9e-170 602.4 396 73.2
Lsat_1_v5_gn_7_99701 Lactuca sativa HOM05D004406 ORTHO05D005660 3.3e-169 599.0 453 68.4
Rhsim06G0184400 Rhododendron simsii HOM05D004406 ORTHO05D005660 9.8e-166 587.4 478 66.3
BcaC05g25520 Brassica carinata HOM05D004406 ORTHO05D005660 1.1e-164 583.9 424 69.1
FAN21G3885 Fragaria x ananassa HOM05D004406 ORTHO05D005660 4.3e-161 572.0 351 77.5
TPR.G9754 Trifolium pratense HOM05D004406 ORTHO05D005660 9.2e-156 554.3 348 75.3
CDE04G2964 Ceratophyllum demersum HOM05D004406 ORTHO05D005660 5.0e-154 548.5 466 60.9
Mapoly0116s0013 Marchantia polymorpha HOM05D004406 ORTHO05D005660 3.1e-151 539.3 497 59.6
Pp3c22_7820 Physcomitrium patens HOM05D004406 ORTHO05D005660 6.6e-146 521.5 477 58.1
Gohir.A11G222401 Gossypium hirsutum HOM05D004406 ORTHO05D005660 1.1e-145 520.8 346 73.1
SMO353G0172 Selaginella moellendorffii HOM05D004406 ORTHO05D005660 2.1e-144 516.5 455 59.8
AL6G51100 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 9.9e-142 507.7 452 61.1
Actinidia35181 Actinidia chinensis HOM05D004406 ORTHO05D005660 1.2e-139 500.7 462 58.4
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 8.7e-130 468.0 444 54.1
CBR_g37525 Chara braunii HOM05D004406 ORTHO05D005660 2.9e-125 453.0 533 47.1
Sabra16G0258600 Salix brachista HOM05D004406 ORTHO05D005660 3.3e-113 412.9 268 73.5
Gorai.006G005600 Gossypium raimondii HOM05D004406 ORTHO05D005660 4.3e-113 412.5 451 51.9
PSO017G0585 Papaver somniferum HOM05D004406 ORTHO05D005660 3.2e-108 396.4 305 64.3
Gorai.007G217600 Gossypium raimondii HOM05D004406 ORTHO05D005660 2.9e-101 373.2 312 65.7
Rhsim08G0107400 Rhododendron simsii HOM05D004406 ORTHO05D005660 1.0e-98 364.8 226 80.1
MCO08G055 Micromonas commoda HOM05D004406 ORTHO05D005660 2.0e-94 350.5 441 46.9
Cre12.g516550 Chlamydomonas reinhardtii HOM05D004406 ORTHO05D005660 1.8e-82 310.8 369 45.8
SHI18054 Sapria himalayana HOM05D004406 ORTHO05D005660 8.8e-82 308.5 271 58.7
Gohir.D11G203050 Gossypium hirsutum HOM05D004406 ORTHO05D005660 1.8e-79 300.8 267 64.0
CSS0001722 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 2.7e-75 287.0 250 62.8
Haze_26719 Corylus avellana HOM05D004406 ORTHO05D005660 8.0e-75 285.4 439 37.6
SEGI_11739 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 2.3e-74 283.9 177 75.7
SEGI_33737 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 4.4e-73 279.6 272 53.3
SGA_v2.0_scaffold181G39778 Striga asiatica HOM05D004406 ORTHO05D005660 3.2e-68 263.5 457 39.6
PRCOL_00002569 Prasinoderma coloniale HOM05D004406 ORTHO05D005660 2.4e-63 247.3 470 35.1
Cfa025278 Carpinus fangiana HOM05D004406 ORTHO05D005660 1.3e-61 241.5 444 38.5
FAN04G0447 Fragaria x ananassa HOM05D004406 ORTHO05D005660 1.6e-54 218.0 175 62.9
CSS0016238 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 1.2e-51 208.4 111 85.6
Zm00001eb421280 Zea mays HOM05D004406 ORTHO05D005660 2.8e-51 207.2 209 52.6
AL6G51070 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 3.6e-51 206.8 181 59.1
Actinidia18838 Actinidia chinensis HOM05D004406 ORTHO05D005660 4.7e-51 206.5 288 43.8
CSS0034423 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 1.4e-50 204.9 111 83.8
CSS0034904 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 5.2e-50 203.0 111 82.9
Zm00001eb023770 Zea mays HOM05D003078 ORTHO05D003545 1.2e-49 201.8 198 53.5
CSS0028761 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 1.2e-41 175.3 111 74.8
Zm00001eb180660 Zea mays HOM05D004406 ORTHO05D000467 1.7e-40 171.4 124 66.1
TPR.G22508 Trifolium pratense HOM05D004406 ORTHO05D005660 1.6e-38 164.9 112 74.1
SHI18055 Sapria himalayana HOM05D004406 ORTHO05D005660 2.3e-37 161.0 182 50.5
Zm00001eb307610 Zea mays HOM05D004406 ORTHO05D005660 1.7e-32 144.8 92 71.7
Zm00001eb005970 Zea mays HOM05D004406 ORTHO05D005660 2.2e-32 144.4 122 59.0
Os06g0564800 Oryza sativa ssp. japonica HOM05D004406 ORTHO05D005660 5.4e-31 139.8 90 74.4
Zm00001eb049380 Zea mays HOM05D004406 ORTHO05D005660 3.5e-30 137.1 116 59.5
Actinidia18841 Actinidia chinensis HOM05D004406 ORTHO05D005660 3.3e-28 130.6 67 92.5
Actinidia18840 Actinidia chinensis HOM05D004406 ORTHO05D005660 7.6e-25 119.4 324 30.2
Haze_08535 Corylus avellana HOM05D004406 ORTHO05D005660 1.6e-22 111.7 125 52.8
Lj3g0015683 Lotus japonicus HOM05D004406 ORTHO05D036510 9.6e-20 102.4 70 71.4
Hma1.2p1_0035F.1_g022190 Hydrangea macrophylla HOM05D004406 ORTHO05D005660 1.1e-18 99.0 58 79.3
C02p50710 Brassica napus HOM05D004406 ORTHO05D005660 1.1e-12 79.0 49 77.6
SEGI_01378 Sequoiadendron giganteum HOM05D000678 ORTHO05D001709 2.9e-08 64.3 39 79.5
DCAR_010031 Daucus carota HOM05D000781 ORTHO05D012367 3.8e-08 63.9 45 68.9
Gohir.D11G203250 Gossypium hirsutum HOM05D004406 ORTHO05D012367 3.8e-08 63.9 46 60.9


User provided reference genes

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