Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002768.1 Olea europaea HOM05D007829 ORTHO05D009903 2.2e-94 349.0 176 100.0
Migut.M01399 Erythranthe guttata HOM05D007829 ORTHO05D009903 3.2e-53 212.2 169 59.2
SGA_v2.0_scaffold4G01872 Striga asiatica HOM05D007829 ORTHO05D009903 3.6e-49 198.7 169 57.4
Dinv07407 Davidia involucrata HOM05D007829 ORTHO05D009903 4.4e-47 191.8 180 53.9
Hma1.2p1_0657F.1_g197120 Hydrangea macrophylla HOM05D007829 ORTHO05D009903 1.1e-45 187.2 169 54.4
Cc00_g34400 Coffea canephora HOM05D007829 ORTHO05D009903 1.4e-45 186.8 192 50.5
Actinidia39272 Actinidia chinensis HOM05D007829 ORTHO05D009903 1.9e-45 186.4 170 54.7
Rhsim02G0099400 Rhododendron simsii HOM05D007829 ORTHO05D009903 3.2e-45 185.7 166 54.8
CSS0014217 Camellia sinensis var. sinensis HOM05D007829 ORTHO05D009903 1.6e-44 183.3 167 53.9
Thecc.06G233800 Theobroma cacao HOM05D007829 ORTHO05D009903 2.7e-44 182.6 170 51.2
COL.COLO4_31889 Corchorus olitorius HOM05D007829 ORTHO05D009903 1.0e-43 180.6 166 51.2
Gohir.A10G009200 Gossypium hirsutum HOM05D007829 ORTHO05D009903 1.0e-43 180.6 170 50.6
Gorai.011G009700 Gossypium raimondii HOM05D007829 ORTHO05D009903 5.0e-43 178.3 170 50.0
Gohir.D10G008900 Gossypium hirsutum HOM05D007829 ORTHO05D009903 6.6e-43 177.9 170 49.4
Manes.08G071000 Manihot esculenta HOM05D007829 ORTHO05D009903 1.5e-42 176.8 163 52.1
MD10G1332100 Malus domestica HOM05D007829 ORTHO05D009903 1.9e-42 176.4 169 48.5
Prupe.4G010000 Prunus persica HOM05D007829 ORTHO05D009903 5.6e-42 174.9 168 48.8
PSO675G8147 Papaver somniferum HOM05D007829 ORTHO05D009903 1.2e-41 173.7 156 51.3
PSO541G5076 Papaver somniferum HOM05D007829 ORTHO05D009903 2.8e-41 172.6 139 55.4
TWI38G1785 Tripterygium wilfordii HOM05D007829 ORTHO05D009903 2.8e-41 172.6 175 49.7
CiPaw.10G078200 Carya illinoinensis HOM05D007829 ORTHO05D009903 4.7e-41 171.8 173 49.1
Nn1g07397 Nelumbo nucifera HOM05D007829 ORTHO05D009903 1.8e-40 169.9 175 49.1
Aqoxy2G02687 Aquilegia oxysepala HOM05D007829 ORTHO05D009903 3.1e-40 169.1 140 55.0
DCAR_004889 Daucus carota HOM05D003856 ORTHO05D004547 4.0e-40 168.7 127 63.0
Potri.016G013200 Populus trichocarpa HOM05D007829 ORTHO05D009903 3.4e-39 165.6 169 46.7
Sc05g0009620 Simmondsia chinensis HOM05D007829 ORTHO05D009903 5.8e-39 164.9 178 46.6
Cpa.g.sc75.113 Carica papaya HOM05D007829 ORTHO05D009903 1.7e-38 163.3 167 46.1
TAR627G0564 Trochodendron aralioides HOM05D007829 ORTHO05D009903 2.2e-38 162.9 169 48.5
TAR627G1193 Trochodendron aralioides HOM05D007829 ORTHO05D009903 2.2e-38 162.9 169 48.5
Eucgr.D01411 Eucalyptus grandis HOM05D007829 ORTHO05D009903 2.9e-38 162.5 167 47.3
Ciclev10018278m.g Citrus clementina HOM05D007829 ORTHO05D009903 3.7e-38 162.2 135 56.3
PGR004G1136 Punica granatum HOM05D007829 ORTHO05D009903 3.7e-38 162.2 171 49.1
THA.LOC104813576 Tarenaya hassleriana HOM05D007829 ORTHO05D009903 3.7e-38 162.2 141 51.1
CARHR229280 Cardamine hirsuta HOM05D007829 ORTHO05D009903 8.3e-38 161.0 139 52.5
A01p13730 Brassica napus HOM05D007829 ORTHO05D009903 2.7e-36 156.0 139 51.1
Lj6g0010113 Lotus japonicus HOM05D007829 ORTHO05D009903 7.8e-36 154.5 171 44.4
BraA01t01318Z Brassica rapa HOM05D007829 ORTHO05D009903 1.0e-35 154.1 172 44.8
BcaC09g51100 Brassica carinata HOM05D007829 ORTHO05D009903 2.3e-35 152.9 170 46.5
Sabra16G0002200 Salix brachista HOM05D007829 ORTHO05D009903 2.3e-35 152.9 186 43.0
C01p16640 Brassica napus HOM05D007829 ORTHO05D009903 1.1e-34 150.6 170 45.9
BolC1t01611H Brassica oleracea HOM05D007829 ORTHO05D009903 1.1e-34 150.6 170 45.9
arahy.Tifrunner.gnm1.ann1.G424KC Arachis hypogaea HOM05D007829 ORTHO05D009903 1.9e-34 149.8 172 44.2
CDE11G1237 Ceratophyllum demersum HOM05D007829 ORTHO05D009903 2.5e-34 149.4 172 43.6
Sp7g20500 Schrenkiella parvula HOM05D007829 ORTHO05D009903 5.6e-34 148.3 195 40.0
SalBow8G1028 Salvia bowleyana HOM05D007829 ORTHO05D009903 9.5e-34 147.5 166 48.8
AT4G22370 Arabidopsis thaliana HOM05D007829 ORTHO05D009903 2.4e-32 142.9 162 44.4
Sabra16G0015800 Salix brachista HOM05D007829 ORTHO05D009903 2.4e-32 142.9 170 42.9
Solyc11g012300.1 Solanum lycopersicum HOM05D007829 ORTHO05D009903 2.4e-32 142.9 162 46.9
Medtr2g025760 Medicago truncatula HOM05D007829 ORTHO05D009903 4.0e-32 142.1 172 43.0
Duzib235G0645 Durio zibethinus HOM05D007829 ORTHO05D009903 2.0e-31 139.8 110 58.2
unitig_5.g30996 Utricularia gibba HOM05D000093 ORTHO05D001309 7.6e-31 137.9 166 48.2
Carub.0007s1893 Capsella rubella HOM05D007829 ORTHO05D009903 9.9e-31 137.5 158 43.7
Psat1g175960 Pisum sativum HOM05D007829 ORTHO05D009903 1.3e-30 137.1 176 40.3
Peaxi162Scf00352g00215 Petunia axillaris HOM05D007829 ORTHO05D009903 1.1e-29 134.0 110 55.5
ATR0712G049 Amborella trichopoda HOM05D007829 ORTHO05D009903 1.2e-28 130.6 127 50.4
Sopen11g007080 Solanum pennellii HOM05D007829 ORTHO05D009903 1.2e-28 130.6 151 45.0
RcHm_v2.0_Chr5g0001461 Rosa chinensis HOM05D007829 ORTHO05D009903 1.6e-28 130.2 167 42.5
Phvul.006G143000 Phaseolus vulgaris HOM05D007829 ORTHO05D009903 2.1e-28 129.8 171 39.2
QL05p069622 Quercus lobata HOM05D007829 ORTHO05D009903 2.7e-28 129.4 183 42.1
PGSC0003DMG400013350 Solanum tuberosum HOM05D007829 ORTHO05D009903 2.7e-28 129.4 153 46.4
FAN21G3309 Fragaria x ananassa HOM05D007829 ORTHO05D009903 6.0e-28 128.3 170 40.6
VMungo0540G1426 Vigna mungo HOM05D007829 ORTHO05D009903 1.7e-27 126.7 171 39.2
FvH4_3g00940 Fragaria vesca HOM05D007829 ORTHO05D009903 3.0e-27 125.9 170 39.4
TPR.G13103 Trifolium pratense HOM05D007829 ORTHO05D009903 6.6e-27 124.8 159 43.4
TAR629G0037 Trochodendron aralioides HOM05D007829 ORTHO05D009903 5.6e-26 121.7 117 49.6
MBI19_g06149_MAGBIO Magnolia biondii HOM05D007829 ORTHO05D009903 2.8e-25 119.4 109 51.4
CANSAT56G1477 Cannabis sativa HOM05D007829 ORTHO05D009903 3.6e-25 119.0 178 38.2
FAN25G0937 Fragaria x ananassa HOM05D007829 ORTHO05D009903 3.6e-25 119.0 182 38.5
Glyma.09G010400 Glycine max HOM05D007829 ORTHO05D009903 3.6e-25 119.0 171 35.7
Lalb_Chr15g0088001 Lupinus albus HOM05D007829 ORTHO05D009903 1.1e-24 117.5 170 38.8
Glyma.15G114900 Glycine max HOM05D007829 ORTHO05D009903 1.8e-24 116.7 171 35.1
Thhalv10027004m.g Eutrema salsugineum HOM05D007829 ORTHO05D009903 3.1e-24 115.9 125 47.2
Aa31LG6G4470 Aethionema arabicum HOM05D007829 ORTHO05D009903 7.6e-23 111.3 85 58.8
AL7G31240 Arabidopsis lyrata HOM05D007829 ORTHO05D009903 1.9e-21 106.7 94 52.1
unitig_748.g7131 Utricularia gibba HOM05D007829 ORTHO05D009903 3.2e-21 105.9 81 61.7
Sed0017863 Sechium edule HOM05D007829 ORTHO05D009903 1.0e-19 100.9 127 38.6
TPR.G18790 Trifolium pratense HOM05D007829 ORTHO05D009903 2.0e-15 86.7 80 45.0
ClCG01G021470 Citrullus lanatus HOM05D007829 ORTHO05D009903 9.9e-15 84.3 127 34.6
Cfa000096 Carpinus fangiana HOM05D007829 ORTHO05D009903 1.1e-13 80.9 76 48.7
CsaV3_6G048490 Cucumis sativus L. HOM05D007829 ORTHO05D009903 7.1e-13 78.2 127 27.6
Solyc11g012310.1 Solanum lycopersicum HOM05D007829 ORTHO05D009903 7.9e-12 74.7 85 44.7
ATR0661G383 Amborella trichopoda HOM05D002745 ORTHO05D002945 1.9e-10 70.1 133 29.3
CANSAT56G3529 Cannabis sativa HOM05D002745 ORTHO05D002945 7.4e-10 68.2 120 33.3
SMO200G0065 Selaginella moellendorffii HOM05D002745 ORTHO05D002945 1.3e-09 67.4 138 28.3
Migut.E01200 Erythranthe guttata HOM05D002745 ORTHO05D002945 1.6e-09 67.0 143 29.4
Gorai.013G178400 Gossypium raimondii HOM05D002745 ORTHO05D002945 2.1e-09 66.6 120 31.7
PSO017G3694 Papaver somniferum HOM05D002745 ORTHO05D002945 2.8e-09 66.2 122 32.0
DCAR_000629 Daucus carota HOM05D002745 ORTHO05D002945 3.7e-09 65.9 136 27.9
FvH4_5g33211 Fragaria vesca HOM05D002745 ORTHO05D002945 3.7e-09 65.9 109 32.1
Gohir.D13G157700 Gossypium hirsutum HOM05D002745 ORTHO05D002945 3.7e-09 65.9 109 33.0
SalBow7G1915 Salvia bowleyana HOM05D000972 ORTHO05D007902 3.7e-09 65.9 108 35.2
Atru.chr13.2449 Acer truncatum HOM05D002745 ORTHO05D002945 6.2e-09 65.1 109 33.0
Dinv38911 Davidia involucrata HOM05D002745 ORTHO05D002945 6.2e-09 65.1 139 25.9
FAN18G3413 Fragaria x ananassa HOM05D000972 ORTHO05D007902 6.2e-09 65.1 109 32.1
FAN08G1704 Fragaria x ananassa HOM05D002745 ORTHO05D002945 1.1e-08 64.3 109 30.3
Lsat_1_v5_gn_4_133100 Lactuca sativa HOM05D002745 ORTHO05D002945 1.1e-08 64.3 130 31.5
Peaxi162Scf00078g00352 Petunia axillaris HOM05D002745 ORTHO05D002945 1.1e-08 64.3 107 33.6
Aqoxy5G00847 Aquilegia oxysepala HOM05D002745 ORTHO05D002945 2.4e-08 63.2 109 33.9
HanXRQChr17g0559011 Helianthus annuus HOM05D002745 ORTHO05D002945 2.4e-08 63.2 143 29.4
FAN08G3121 Fragaria x ananassa HOM05D002745 ORTHO05D002945 3.1e-08 62.8 118 29.7
Cpa.g.sc21.67 Carica papaya HOM05D002745 ORTHO05D002945 4.0e-08 62.4 109 33.0
ATR1089G026 Amborella trichopoda HOM05D002745 ORTHO05D002945 5.3e-08 62.0 109 33.9
Eucgr.E00649 Eucalyptus grandis HOM05D002745 ORTHO05D002945 5.3e-08 62.0 116 29.3
Sed0022750 Sechium edule HOM05D007829 ORTHO05D009903 5.3e-08 62.0 76 36.8
SEGI_16879 Sequoiadendron giganteum HOM05D002745 ORTHO05D002945 9.0e-08 61.2 159 24.5
BolC6t39614H Brassica oleracea HOM05D002745 ORTHO05D002945 1.2e-07 60.8 120 32.5
vmacro17840 Vaccinium macrocarpon HOM05D002745 ORTHO05D002945 1.5e-07 60.5 120 30.0
SEGI_30590 Sequoiadendron giganteum HOM05D002745 ORTHO05D002945 2.0e-07 60.1 132 28.0
COL.COLO4_09994 Corchorus olitorius HOM05D002745 ORTHO05D002945 3.4e-07 59.3 120 30.0
Hma1.2p1_0004F.1_g003790 Hydrangea macrophylla HOM05D002745 ORTHO05D002945 5.8e-07 58.5 109 33.0
Hma1.2p1_0004F.1_g003800 Hydrangea macrophylla HOM05D002745 ORTHO05D002945 5.8e-07 58.5 109 33.0
Eucgr.F02973 Eucalyptus grandis HOM05D002745 ORTHO05D002945 9.9e-07 57.8 139 28.8
Sc22g0005360 Simmondsia chinensis HOM05D002745 ORTHO05D002945 9.9e-07 57.8 168 25.6
TAR628G0730 Trochodendron aralioides HOM05D002745 ORTHO05D002945 2.2e-06 56.6 132 29.5
Sopen12g028700 Solanum pennellii HOM05D002745 ORTHO05D002945 3.8e-06 55.8 117 29.1


User provided reference genes

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