Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002767.1 Olea europaea HOM05D007926 ORTHO05D009983 1.5e-55 219.2 102 100.0
Hma1.2p1_0700F.1_g205740 Hydrangea macrophylla HOM05D007926 ORTHO05D009983 1.0e-32 143.3 102 61.8
Solyc04g014750.1 Solanum lycopersicum HOM05D007926 ORTHO05D009983 1.4e-29 132.9 101 59.4
Sopen04g006860 Solanum pennellii HOM05D007926 ORTHO05D009983 1.4e-29 132.9 101 59.4
SGA_v2.0_scaffold89G27497 Striga asiatica HOM05D007926 ORTHO05D009983 4.1e-29 131.3 100 57.0
Migut.H01604 Erythranthe guttata HOM05D007926 ORTHO05D009983 2.7e-28 128.6 73 71.2
PGSC0003DMG400023652 Solanum tuberosum HOM05D007926 ORTHO05D009983 4.5e-28 127.9 101 57.4
RhsimUnG0109600 Rhododendron simsii HOM05D007926 ORTHO05D009983 7.7e-28 127.1 102 52.9
Cfa000107 Carpinus fangiana HOM05D007926 ORTHO05D009983 2.9e-27 125.2 95 55.8
FAN25G3056 Fragaria x ananassa HOM05D007926 ORTHO05D009983 3.8e-27 124.8 105 54.3
Rhsim13G0146200 Rhododendron simsii HOM05D007926 ORTHO05D009983 8.6e-27 123.6 102 52.0
CSS0027622 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 1.1e-26 123.2 106 55.7
FAN21G0219 Fragaria x ananassa HOM05D007926 ORTHO05D009983 1.1e-26 123.2 105 53.3
Ciclev10017269m.g Citrus clementina HOM05D007926 ORTHO05D009983 1.5e-26 122.9 101 54.5
Prupe.4G010900 Prunus persica HOM05D007926 ORTHO05D009983 1.5e-26 122.9 89 56.2
TWI63G0020 Tripterygium wilfordii HOM05D007926 ORTHO05D009983 1.5e-26 122.9 87 58.6
DCAR_002220 Daucus carota HOM05D007926 ORTHO05D009983 1.9e-26 122.5 96 57.3
Duzib192G0081 Durio zibethinus HOM05D007926 ORTHO05D009983 5.5e-26 120.9 73 65.8
FvH4_3g01020 Fragaria vesca HOM05D007926 ORTHO05D009983 5.5e-26 120.9 105 52.4
CiPaw.09G102200 Carya illinoinensis HOM05D007926 ORTHO05D009983 9.5e-26 120.2 86 59.3
TAR627G0241 Trochodendron aralioides HOM05D007926 ORTHO05D009983 1.6e-25 119.4 100 53.0
Potri.006G009500 Populus trichocarpa HOM05D007926 ORTHO05D009983 1.4e-24 116.3 71 64.8
CANSAT56G0946 Cannabis sativa HOM05D007926 ORTHO05D009983 2.3e-24 115.5 94 52.1
Eucgr.E03949 Eucalyptus grandis HOM05D007926 ORTHO05D009983 3.0e-24 115.2 96 50.0
AUR62021866 Chenopodium quinoa HOM05D007926 ORTHO05D009983 4.0e-24 114.8 100 50.0
Sabra06G0007300 Salix brachista HOM05D007926 ORTHO05D009983 4.0e-24 114.8 69 66.7
Manes.13G107300 Manihot esculenta HOM05D007926 ORTHO05D009983 5.2e-24 114.4 89 58.4
Atru.chr1.2458 Acer truncatum HOM05D007926 ORTHO05D009983 8.9e-24 113.6 94 52.1
Glyma.15G114500 Glycine max HOM05D007926 ORTHO05D009983 8.9e-24 113.6 85 58.8
Lalb_Chr18g0056941 Lupinus albus HOM05D007926 ORTHO05D009983 1.2e-23 113.2 86 54.7
RcHm_v2.0_Chr5g0001551 Rosa chinensis HOM05D007926 ORTHO05D009983 1.5e-23 112.8 103 52.4
Gohir.A10G009400 Gossypium hirsutum HOM05D007926 ORTHO05D009983 2.0e-23 112.5 99 50.5
arahy.Tifrunner.gnm1.ann1.I7SJA3 Arachis hypogaea HOM05D007926 ORTHO05D009983 3.4e-23 111.7 87 56.3
PGR042G0446 Punica granatum HOM05D007926 ORTHO05D009983 4.4e-23 111.3 90 53.3
Gorai.011G009900 Gossypium raimondii HOM05D007926 ORTHO05D009983 5.7e-23 110.9 99 50.5
Sc05g0009590 Simmondsia chinensis HOM05D007926 ORTHO05D009983 5.7e-23 110.9 91 56.0
Phvul.006G143300 Phaseolus vulgaris HOM05D007926 ORTHO05D009983 1.3e-22 109.8 91 53.8
Manes.09G070200 Manihot esculenta HOM05D007926 ORTHO05D009983 1.7e-22 109.4 96 50.0
CSS0047308 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 2.8e-22 108.6 99 52.5
CSS0041628 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 8.3e-22 107.1 97 53.6
Nn1g03317 Nelumbo nucifera HOM05D007926 ORTHO05D009983 2.7e-20 102.1 93 48.4
Gohir.D06G216000 Gossypium hirsutum HOM05D007926 ORTHO05D009983 4.5e-20 101.3 102 47.1
Gorai.010G250100 Gossypium raimondii HOM05D007926 ORTHO05D009983 4.5e-20 101.3 102 47.1
MD10G1331300 Malus domestica HOM05D007926 ORTHO05D009983 4.5e-20 101.3 95 50.5
Gohir.D10G009100 Gossypium hirsutum HOM05D007926 ORTHO05D009983 7.8e-20 100.5 98 46.9
Gohir.A06G205500 Gossypium hirsutum HOM05D007926 ORTHO05D009983 1.3e-19 99.8 92 48.9
Sed0015463 Sechium edule HOM05D007926 ORTHO05D009983 8.6e-19 97.1 93 45.2
MELO3C021682.2 Cucumis melo HOM05D007926 ORTHO05D009983 2.5e-18 95.5 86 46.5
HanXRQChr15g0470111 Helianthus annuus HOM05D007926 ORTHO05D009983 1.6e-17 92.8 91 52.7
TPR.G13087 Trifolium pratense HOM05D007926 ORTHO05D009983 1.0e-16 90.1 99 39.4
Thhalv10009916m.g Eutrema salsugineum HOM05D007926 ORTHO05D009983 1.8e-16 89.4 73 52.1
Aa31LG1G2660 Aethionema arabicum HOM05D007926 ORTHO05D009983 2.3e-16 89.0 101 41.6
Sp1g10740 Schrenkiella parvula HOM05D007926 ORTHO05D009983 3.0e-16 88.6 73 50.7
CARHR012430 Cardamine hirsuta HOM05D007926 ORTHO05D009983 4.0e-16 88.2 73 49.3
Eucgr.E03934 Eucalyptus grandis HOM05D007926 ORTHO05D009983 6.8e-16 87.4 72 47.2
DCAR_004887 Daucus carota HOM05D000701 ORTHO05D000531 8.9e-16 87.0 62 58.1
ATR0712G022 Amborella trichopoda HOM05D007926 ORTHO05D009983 2.6e-15 85.5 66 50.0
Carub.0001s1175 Capsella rubella HOM05D007926 ORTHO05D009983 2.6e-15 85.5 104 38.5
AL1G23320 Arabidopsis lyrata HOM05D007926 ORTHO05D009983 3.4e-15 85.1 105 41.0
BcaC07g41751 Brassica carinata HOM05D007926 ORTHO05D009983 4.4e-15 84.7 73 47.9
A08p33040 Brassica napus HOM05D007926 ORTHO05D009983 5.8e-15 84.3 73 49.3
BcaB08g37432 Brassica carinata HOM05D007926 ORTHO05D009983 1.3e-14 83.2 73 49.3
BcaC07g41734 Brassica carinata HOM05D007926 ORTHO05D009983 1.3e-14 83.2 73 49.3
BcaC07g41735 Brassica carinata HOM05D007926 ORTHO05D009983 1.3e-14 83.2 73 49.3
THA.LOC104809471 Tarenaya hassleriana HOM05D007926 ORTHO05D009983 1.3e-14 83.2 66 50.0
BraA08t35224Z Brassica rapa HOM05D007926 ORTHO05D009983 2.2e-14 82.4 103 39.8
BcaC05g25224 Brassica carinata HOM05D007926 ORTHO05D009983 3.7e-14 81.6 73 46.6
C05p11100 Brassica napus HOM05D007926 ORTHO05D009983 3.7e-14 81.6 73 46.6
BolC5t29857H Brassica oleracea HOM05D007926 ORTHO05D009983 3.7e-14 81.6 73 46.6
BcaB02g06430 Brassica carinata HOM05D007926 ORTHO05D009983 4.9e-14 81.3 78 46.2
ClCG01G010240 Citrullus lanatus HOM05D007926 ORTHO05D009983 8.3e-14 80.5 94 41.5
A06p09430 Brassica napus HOM05D007926 ORTHO05D009983 1.2e-12 76.6 102 43.1
BraA06t24128Z Brassica rapa HOM05D007926 ORTHO05D009983 1.2e-12 76.6 102 43.1
Medtr2g025700 Medicago truncatula HOM05D007926 ORTHO05D009983 2.7e-12 75.5 88 38.6
Lj6g0017055 Lotus japonicus HOM05D007926 ORTHO05D009983 3.5e-12 75.1 104 39.4
C08p47740 Brassica napus HOM05D007926 ORTHO05D009983 2.3e-11 72.4 65 44.6
BolC8t52311H Brassica oleracea HOM05D007926 ORTHO05D009983 3.9e-11 71.6 65 44.6
A09p64120 Brassica napus HOM05D007926 ORTHO05D009983 1.5e-10 69.7 92 38.0
BraA09t41758Z Brassica rapa HOM05D007926 ORTHO05D009983 1.5e-10 69.7 92 38.0
AT1G12064 Arabidopsis thaliana HOM05D007926 ORTHO05D009983 8.0e-09 63.9 99 37.4


User provided reference genes

Program Settings