Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002719.1 Olea europaea HOM05D004671 ORTHO05D005638 2.1e-194 682.2 351 100.0
MSTRG.27109 Avicennia marina HOM05D004671 ORTHO05D005638 1.1e-81 307.8 374 50.5
Cc02_g02840 Coffea canephora HOM05D004671 ORTHO05D005638 1.1e-73 281.2 377 46.7
Dinv24388 Davidia involucrata HOM05D004671 ORTHO05D005638 6.7e-71 271.9 373 46.6
Nitab4.5_0001951g0070 Nicotiana tabacum HOM05D004671 ORTHO05D005638 3.3e-70 269.6 387 45.7
CAN.G208.79 Capsicum annuum HOM05D004671 ORTHO05D005638 1.4e-68 264.2 377 45.4
HanXRQChr10g0304161 Helianthus annuus HOM05D004671 ORTHO05D005638 2.6e-67 260.0 374 43.6
HanXRQChr15g0497081 Helianthus annuus HOM05D004671 ORTHO05D005638 5.9e-67 258.8 374 43.3
Migut.K00770 Erythranthe guttata HOM05D004671 ORTHO05D005638 1.7e-66 257.3 366 44.3
SGA_v2.0_scaffold60G21057 Striga asiatica HOM05D004671 ORTHO05D005638 1.7e-66 257.3 367 42.5
Actinidia03123 Actinidia chinensis HOM05D004671 ORTHO05D005638 7.2e-65 251.9 377 43.2
HanXRQChr06g0163751 Helianthus annuus HOM05D004671 ORTHO05D005638 7.2e-65 251.9 372 43.0
ECA233G0868 Erigeron canadensis HOM05D004671 ORTHO05D005638 7.9e-64 248.4 378 41.5
SalBow1G2445 Salvia bowleyana HOM05D004671 ORTHO05D005638 2.5e-62 243.4 371 43.7
SalBow1G5895 Salvia bowleyana HOM05D004671 ORTHO05D005638 2.5e-62 243.4 371 43.7
DCAR_015049 Daucus carota HOM05D004671 ORTHO05D005638 2.2e-61 240.4 311 47.9
DCAR_010301 Daucus carota HOM05D004671 ORTHO05D005638 6.3e-61 238.8 311 47.9
Lsat_1_v5_gn_3_14041 Lactuca sativa HOM05D004671 ORTHO05D005638 1.8e-60 237.3 376 40.2
Rhsim09G0198100 Rhododendron simsii HOM05D004671 ORTHO05D005638 3.1e-60 236.5 306 46.4
vmacro09835 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 9.1e-60 235.0 403 40.0
Lsat_1_v5_gn_8_8441 Lactuca sativa HOM05D004671 ORTHO05D005638 7.7e-59 231.9 376 39.6
GSVIVG01028933001 Vitis vinifera HOM05D004671 ORTHO05D005638 6.5e-58 228.8 373 40.5
Nitab4.5_0000080g0100 Nicotiana tabacum HOM05D004671 ORTHO05D005638 3.2e-57 226.5 387 40.8
TAR629G1771 Trochodendron aralioides HOM05D004671 ORTHO05D005638 5.5e-57 225.7 377 39.8
Nn3g16880 Nelumbo nucifera HOM05D004671 ORTHO05D005638 2.7e-56 223.4 381 40.7
Eucgr.K00269 Eucalyptus grandis HOM05D004671 ORTHO05D005638 1.8e-55 220.7 374 39.0
CANSAT21G1295 Cannabis sativa HOM05D004671 ORTHO05D005638 9.7e-54 214.9 371 39.6
CANSAT21G1725 Cannabis sativa HOM05D004671 ORTHO05D005638 1.3e-53 214.5 371 39.6
CiPaw.03G107600 Carya illinoinensis HOM05D004671 ORTHO05D005638 2.8e-53 213.4 300 42.3
COL.COLO4_14329 Corchorus olitorius HOM05D004671 ORTHO05D005638 6.3e-53 212.2 375 38.9
Cfa022980 Carpinus fangiana HOM05D004671 ORTHO05D005638 7.0e-52 208.8 371 37.7
Cfa002753 Carpinus fangiana HOM05D004671 ORTHO05D005638 3.5e-51 206.5 382 36.9
Duzib205G1877 Durio zibethinus HOM05D004671 ORTHO05D005638 5.9e-51 205.7 298 42.3
Thecc.03G178300 Theobroma cacao HOM05D004671 ORTHO05D005638 7.7e-51 205.3 297 42.1
Peaxi162Scf00848g00012 Petunia axillaris HOM05D004671 ORTHO05D005638 1.3e-50 204.5 231 49.4
Manes.14G025200 Manihot esculenta HOM05D004671 ORTHO05D005638 2.2e-50 203.8 296 41.6
vmacro21316 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 2.5e-49 200.3 365 40.0
Gorai.006G048800 Gossypium raimondii HOM05D004671 ORTHO05D005638 5.5e-49 199.1 292 40.8
Cpa.g.sc107.62 Carica papaya HOM05D004671 ORTHO05D005638 7.2e-49 198.7 318 40.3
Gohir.A09G041700 Gossypium hirsutum HOM05D004671 ORTHO05D005638 7.2e-49 198.7 292 40.8
Atru.chr1.442 Acer truncatum HOM05D004671 ORTHO05D005638 9.4e-49 198.4 308 39.0
Gohir.D09G042500 Gossypium hirsutum HOM05D004671 ORTHO05D005638 9.4e-49 198.4 292 40.4
Haze_25041 Corylus avellana HOM05D004671 ORTHO05D005638 3.6e-48 196.4 305 40.3
PGR142G1152 Punica granatum HOM05D004671 ORTHO05D005638 4.7e-48 196.1 375 37.6
Solyc06g036000.4 Solanum lycopersicum HOM05D004671 ORTHO05D005638 4.4e-46 189.5 230 50.0
GSVIVG01017918001 Vitis vinifera HOM05D004671 ORTHO05D005638 5.7e-46 189.1 373 36.2
Glyma.10G234800 Glycine max HOM05D004671 ORTHO05D005638 7.4e-46 188.7 289 39.8
Ciclev10004721m.g Citrus clementina HOM05D004671 ORTHO05D005638 2.8e-45 186.8 297 38.0
Prupe.2G295500 Prunus persica HOM05D004671 ORTHO05D005638 4.8e-45 186.0 368 36.7
Sc13g0008760 Simmondsia chinensis HOM05D004671 ORTHO05D005638 6.3e-45 185.7 287 42.5
Potri.015G144900 Populus trichocarpa HOM05D004671 ORTHO05D005638 1.1e-44 184.9 379 35.6
Phvul.007G071300 Phaseolus vulgaris HOM05D004671 ORTHO05D005638 1.8e-44 184.1 370 34.3
Sc13g0008680 Simmondsia chinensis HOM05D004671 ORTHO05D005638 1.8e-44 184.1 292 40.8
Glyma.20G159500 Glycine max HOM05D004671 ORTHO05D005638 3.1e-44 183.3 289 40.1
CsaV3_3G017180 Cucumis sativus L. HOM05D004671 ORTHO05D005638 7.0e-44 182.2 285 41.4
Lalb_Chr06g0161161 Lupinus albus HOM05D004671 ORTHO05D005638 7.0e-44 182.2 363 34.7
Sabra15G0154400 Salix brachista HOM05D004671 ORTHO05D005638 1.2e-43 181.4 372 36.3
FvH4_7g29570 Fragaria vesca HOM05D004671 ORTHO05D005638 1.6e-43 181.0 311 38.6
VMungo0720G2100 Vigna mungo HOM05D004671 ORTHO05D005638 3.5e-43 179.9 368 34.0
Sc13g0008790 Simmondsia chinensis HOM05D004671 ORTHO05D005638 5.9e-43 179.1 300 39.3
Aqoxy3G03421 Aquilegia oxysepala HOM05D004671 ORTHO05D005638 2.2e-42 177.2 293 41.3
PSO017G5643 Papaver somniferum HOM05D004671 ORTHO05D005638 2.2e-42 177.2 301 38.9
EL10Ac3g05622 Beta vulgaris HOM05D004671 ORTHO05D005638 2.9e-42 176.8 296 38.9
ClCG05G008100 Citrullus lanatus HOM05D004671 ORTHO05D005638 3.8e-42 176.4 297 39.7
PSO063G7539 Papaver somniferum HOM05D004671 ORTHO05D005638 3.8e-42 176.4 301 38.9
FAN01G2609 Fragaria x ananassa HOM05D004671 ORTHO05D005638 8.5e-42 175.3 315 37.5
TWI14G0685 Tripterygium wilfordii HOM05D004671 ORTHO05D005638 1.1e-41 174.9 298 37.6
CSS0035516 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 1.5e-41 174.5 227 45.4
FAN10G3685 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.5e-41 174.5 315 37.5
FAN06G5094 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.9e-41 174.1 318 37.4
FAN10G4176 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.9e-41 174.1 315 37.5
MD07G1271200 Malus domestica HOM05D004671 ORTHO05D005638 2.5e-41 173.7 296 38.2
FAN03G0738 Fragaria x ananassa HOM05D004671 ORTHO05D005638 4.2e-41 172.9 297 38.0
Sed0007536 Sechium edule HOM05D004671 ORTHO05D005638 4.2e-41 172.9 283 42.4
FAN06G3892 Fragaria x ananassa HOM05D004671 ORTHO05D005638 7.2e-41 172.2 325 37.8
HanXRQChr06g0163701 Helianthus annuus HOM05D001754 ORTHO05D005638 7.2e-41 172.2 235 45.1
MD01G1202100 Malus domestica HOM05D004671 ORTHO05D005638 2.1e-40 170.6 285 38.9
Aa31LG4G17500 Aethionema arabicum HOM05D004671 ORTHO05D005638 8.0e-40 168.7 314 35.0
AUR62015967 Chenopodium quinoa HOM05D004671 ORTHO05D005638 8.0e-40 168.7 307 39.7
CARHR157820 Cardamine hirsuta HOM05D004671 ORTHO05D005638 1.0e-39 168.3 301 37.9
Lj5g0019412 Lotus japonicus HOM05D004671 ORTHO05D005638 1.4e-39 167.9 275 40.7
Sp5g13050 Schrenkiella parvula HOM05D004671 ORTHO05D005638 2.3e-39 167.2 298 36.6
Thhalv10010290m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 6.8e-39 165.6 300 36.7
RcHm_v2.0_Chr1g0377571 Rosa chinensis HOM05D004671 ORTHO05D005638 8.8e-39 165.2 291 36.1
arahy.Tifrunner.gnm1.ann1.V0I5I8 Arachis hypogaea HOM05D004671 ORTHO05D005638 1.2e-38 164.9 300 36.7
Ca_10754_v3 Cicer arietinum L. HOM05D004671 ORTHO05D005638 2.0e-38 164.1 296 37.8
TPR.G27007 Trifolium pratense HOM05D004671 ORTHO05D005638 3.4e-38 163.3 276 40.6
arahy.Tifrunner.gnm1.ann1.U8RPI8 Arachis hypogaea HOM05D004671 ORTHO05D005638 4.4e-38 162.9 394 31.0
THA.LOC104818634 Tarenaya hassleriana HOM05D004671 ORTHO05D005638 5.7e-38 162.5 359 35.1
Psat6g198360 Pisum sativum HOM05D004671 ORTHO05D005638 2.8e-37 160.2 279 38.0
BcaB02g09572 Brassica carinata HOM05D004671 ORTHO05D005638 3.7e-37 159.8 300 35.7
Hund04757 Selenicereus undatus HOM05D004671 ORTHO05D005638 3.7e-37 159.8 294 37.4
unitig_37.g12531 Utricularia gibba HOM05D004671 ORTHO05D005638 1.1e-36 158.3 376 35.4
AL5G28510 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 2.4e-36 157.1 300 34.7
BcaC01g02382 Brassica carinata HOM05D004671 ORTHO05D005638 4.1e-36 156.4 277 36.8
BolC3t18845H Brassica oleracea HOM05D004671 ORTHO05D005638 4.1e-36 156.4 277 36.8
Migut.K01220 Erythranthe guttata HOM05D004671 ORTHO05D005638 4.1e-36 156.4 181 49.2
Thhalv10003189m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 5.4e-36 156.0 300 35.3
AL6G42740 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 9.1e-36 155.2 300 34.3
AT3G49000 Arabidopsis thaliana HOM05D004671 ORTHO05D005638 9.1e-36 155.2 279 37.6
C03p65870 Brassica napus HOM05D004671 ORTHO05D005638 9.1e-36 155.2 277 36.5
Carub.0005s1517 Capsella rubella HOM05D004671 ORTHO05D005638 1.6e-35 154.5 280 36.4
Sopen06g011780 Solanum pennellii HOM05D004671 ORTHO05D005638 4.5e-35 152.9 167 53.3
SHI26612 Sapria himalayana HOM05D004671 ORTHO05D005638 1.3e-34 151.4 291 34.7
A06p28000 Brassica napus HOM05D004671 ORTHO05D005638 2.2e-34 150.6 300 36.0
Pp3c16_7220 Physcomitrium patens HOM05D004671 ORTHO05D005638 2.9e-34 150.2 279 36.2
Medtr1g101100 Medicago truncatula HOM05D004671 ORTHO05D005638 3.8e-34 149.8 351 35.3
BraA06t25741Z Brassica rapa HOM05D004671 ORTHO05D005638 1.1e-33 148.3 300 35.7
RcHm_v2.0_Chr6g0258831 Rosa chinensis HOM05D004671 ORTHO05D005638 1.5e-33 147.9 255 36.9
Haze_13677 Corylus avellana HOM05D004671 ORTHO05D005638 1.9e-33 147.5 435 29.7
Ah.13g068640 Amaranthus hybridus HOM05D004671 ORTHO05D005638 3.6e-32 143.3 278 35.3
Mapoly0133s0004 Marchantia polymorpha HOM05D004671 ORTHO05D005638 8.0e-32 142.1 284 35.6
MELO3C031814.2 Cucumis melo HOM05D004671 ORTHO05D005638 5.2e-31 139.4 351 30.8
HPP92_020192 Vanilla planifolia HOM05D004671 ORTHO05D005638 4.4e-30 136.3 305 34.8
Carub.0004s0531 Capsella rubella HOM05D004671 ORTHO05D005638 7.5e-30 135.6 306 32.7
AagrBONN_evm.TU.Sc2ySwM_344.423 Anthoceros agrestis HOM05D004671 ORTHO05D005638 1.3e-29 134.8 285 34.7
Sed0027520 Sechium edule HOM05D004671 ORTHO05D005638 1.8e-28 131.0 244 38.5
ATR0737G144 Amborella trichopoda HOM05D004671 ORTHO05D005638 5.4e-28 129.4 276 36.6
SMO276G0042 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 9.1e-28 128.6 278 33.5
arahy.Tifrunner.gnm1.ann1.R5FQEP Arachis hypogaea HOM05D004671 ORTHO05D005638 2.9e-26 123.6 227 37.4
AUR62021173 Chenopodium quinoa HOM05D004671 ORTHO05D005638 6.6e-26 122.5 274 34.7
arahy.Tifrunner.gnm1.ann1.4LKL39 Arachis hypogaea HOM05D004671 ORTHO05D005638 9.5e-25 118.6 224 35.3
Os01g0679000 Oryza sativa ssp. japonica HOM05D004671 ORTHO05D005638 6.8e-23 112.5 298 28.5
CDE04G3622 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 1.3e-21 108.2 177 40.7
Zm00001eb160040 Zea mays HOM05D004671 ORTHO05D005638 1.7e-21 107.8 301 28.9
QL09p013914 Quercus lobata HOM05D004671 ORTHO05D005638 4.9e-21 106.3 155 40.6
Peaxi162Scf00848g00015 Petunia axillaris HOM05D004671 ORTHO05D005638 1.8e-20 104.4 110 56.4
SMO143G0293 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 3.2e-20 103.6 255 32.9
CDE04G1371 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 2.5e-17 94.0 111 47.7
Oeu004097.1 Olea europaea HOM05D004671 ORTHO05D005638 6.2e-16 89.4 45 88.9
Ah.13g076510 Amaranthus hybridus HOM05D004671 ORTHO05D007692 8.0e-16 89.0 204 32.8
MD07G1271300 Malus domestica HOM05D004671 ORTHO05D005638 2.3e-15 87.4 152 38.8
CSS0016908 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 9.8e-14 82.0 179 35.2
Zm00001eb440850 Zea mays HOM05D004671 ORTHO05D005638 6.4e-13 79.3 132 36.4
CBR_g5700 Chara braunii HOM05D004671 ORTHO05D005638 6.6e-10 69.3 108 35.2
HanXRQChr06g0163721 Helianthus annuus HOM05D004671 ORTHO05D005638 3.3e-09 67.0 92 41.3
CAN.G527.1 Capsicum annuum HOM05D004671 ORTHO05D005638 9.5e-09 65.5 233 28.3
Glyma.20G157700 Glycine max HOM05D004671 ORTHO05D005638 2.3e-07 60.8 82 40.2
Glyma.12G162990 Glycine max HOM05D004671 ORTHO05D005638 3.1e-07 60.5 77 41.6
CBR_g5701 Chara braunii HOM05D004671 ORTHO05D005638 9.8e-06 55.5 91 27.5


User provided reference genes

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