Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002668.1 Olea europaea HOM05D001376 ORTHO05D003384 7.5e-33 143.3 73 100.0
Oeu014620.1 Olea europaea HOM05D001376 ORTHO05D003384 2.8e-24 114.8 78 82.1
Dinv20265 Davidia involucrata HOM05D001376 ORTHO05D003384 1.6e-22 109.0 79 74.7
MSTRG.20466 Avicennia marina HOM05D001376 ORTHO05D003384 3.5e-22 107.8 79 75.9
Manes.09G150900 Manihot esculenta HOM05D001376 ORTHO05D003384 5.9e-22 107.1 77 76.6
CSS0032755 Camellia sinensis var. sinensis HOM05D001376 ORTHO05D003384 2.9e-21 104.8 79 73.4
Actinidia18371 Actinidia chinensis HOM05D001376 ORTHO05D003384 1.1e-20 102.8 79 72.2
Manes.08G136700 Manihot esculenta HOM05D001376 ORTHO05D003384 1.1e-20 102.8 79 73.4
Duzib128G1990 Durio zibethinus HOM05D001376 ORTHO05D003384 2.5e-20 101.7 78 73.1
Dinv05260 Davidia involucrata HOM05D001376 ORTHO05D003384 5.5e-20 100.5 83 69.9
CANSAT54G2402 Cannabis sativa HOM05D001376 ORTHO05D003384 9.5e-20 99.8 82 69.5
Nitab4.5_0002247g0170 Nicotiana tabacum HOM05D001376 ORTHO05D003384 9.5e-20 99.8 79 68.4
Nitab4.5_0006420g0020 Nicotiana tabacum HOM05D001376 ORTHO05D003384 9.5e-20 99.8 79 68.4
Thecc.05G280200 Theobroma cacao HOM05D001376 ORTHO05D003384 9.5e-20 99.8 79 70.9
Prupe.6G345700 Prunus persica HOM05D001376 ORTHO05D003384 1.2e-19 99.4 79 68.4
QL03p027781 Quercus lobata HOM05D001376 ORTHO05D003384 1.2e-19 99.4 80 68.8
TWI56G0636 Tripterygium wilfordii HOM05D001376 ORTHO05D003384 1.6e-19 99.0 81 67.9
TWI56G0755 Tripterygium wilfordii HOM05D001376 ORTHO05D003384 1.6e-19 99.0 81 67.9
Cfa006393 Carpinus fangiana HOM05D001376 ORTHO05D003384 2.1e-19 98.6 79 69.6
Oeu016453.1 Olea europaea HOM05D001376 ORTHO05D003384 2.8e-19 98.2 79 69.6
TPR.G6986 Trifolium pratense HOM05D001376 ORTHO05D003384 6.1e-19 97.1 86 67.4
Psat3g187920 Pisum sativum HOM05D001376 ORTHO05D003384 1.0e-18 96.3 82 69.5
GSVIVG01036237001 Vitis vinifera HOM05D001376 ORTHO05D003384 1.0e-18 96.3 79 68.4
Lj1g0011630 Lotus japonicus HOM05D001376 ORTHO05D003384 1.4e-18 95.9 83 67.5
TWI12G1146 Tripterygium wilfordii HOM05D001376 ORTHO05D003384 2.3e-18 95.1 82 65.9
Ciclev10028209m.g Citrus clementina HOM05D001376 ORTHO05D003384 3.0e-18 94.7 79 69.6
Duzib106G1306 Durio zibethinus HOM05D001376 ORTHO05D003384 5.2e-18 94.0 83 67.5
Medtr7g115340 Medicago truncatula HOM05D001376 ORTHO05D003384 5.2e-18 94.0 79 68.4
Potri.005G056100 Populus trichocarpa HOM05D001376 ORTHO05D003384 5.2e-18 94.0 79 68.4
Ca_09432_v3 Cicer arietinum L. HOM05D001376 ORTHO05D003384 6.8e-18 93.6 80 68.8
Glyma.19G246200 Glycine max HOM05D001376 ORTHO05D003384 8.9e-18 93.2 84 66.7
SalBow4G1861 Salvia bowleyana HOM05D001376 ORTHO05D003384 8.9e-18 93.2 78 67.9
Solyc01g097010.3 Solanum lycopersicum HOM05D001376 ORTHO05D003384 8.9e-18 93.2 79 65.8
Sopen01g040710 Solanum pennellii HOM05D001376 ORTHO05D003384 8.9e-18 93.2 79 65.8
Glyma.03G248200 Glycine max HOM05D001376 ORTHO05D003384 1.2e-17 92.8 84 66.7
MD12G1244000 Malus domestica HOM05D001376 ORTHO05D003384 1.5e-17 92.4 79 63.3
PGR004G0191 Punica granatum HOM05D001376 ORTHO05D003384 1.5e-17 92.4 85 67.1
CAN.G134.62 Capsicum annuum HOM05D001376 ORTHO05D003384 2.6e-17 91.7 79 64.6
Oeu038470.1 Olea europaea HOM05D001376 ORTHO05D003384 3.4e-17 91.3 79 64.6
Sed0013004 Sechium edule HOM05D001376 ORTHO05D003384 3.4e-17 91.3 80 63.8
Migut.B01120 Erythranthe guttata HOM05D001376 ORTHO05D003384 4.4e-17 90.9 88 63.6
Potri.013G043000 Populus trichocarpa HOM05D001376 ORTHO05D003384 4.4e-17 90.9 79 67.1
arahy.Tifrunner.gnm1.ann1.QL2VNI Arachis hypogaea HOM05D001376 ORTHO05D003384 1.3e-16 89.4 88 62.5
arahy.Tifrunner.gnm1.ann1.UPVY9X Arachis hypogaea HOM05D001376 ORTHO05D003384 1.3e-16 89.4 88 62.5
Phvul.006G103100 Phaseolus vulgaris HOM05D001376 ORTHO05D003384 1.7e-16 89.0 85 67.1
Gohir.D11G260500 Gossypium hirsutum HOM05D001376 ORTHO05D003384 2.2e-16 88.6 79 68.4
Gorai.007G278800 Gossypium raimondii HOM05D001376 ORTHO05D003384 2.2e-16 88.6 79 68.4
VMungo0540G0510 Vigna mungo HOM05D001376 ORTHO05D003384 2.2e-16 88.6 88 62.5
SGA_v2.0_scaffold172G38977 Striga asiatica HOM05D001376 ORTHO05D003384 6.3e-16 87.0 78 67.9
Gohir.A11G250000 Gossypium hirsutum HOM05D001376 ORTHO05D003384 8.3e-16 86.7 79 67.1
Nn1g02622 Nelumbo nucifera HOM05D001376 ORTHO05D003384 1.1e-15 86.3 81 65.4
Peaxi162Scf00647g00124 Petunia axillaris HOM05D001376 ORTHO05D003384 1.1e-15 86.3 83 61.4
Nn3g19546 Nelumbo nucifera HOM05D001376 ORTHO05D003384 1.8e-15 85.5 80 65.0
TAR636G3435 Trochodendron aralioides HOM05D001376 ORTHO05D003384 2.4e-15 85.1 80 63.8
CiPaw.08G121600 Carya illinoinensis HOM05D001376 ORTHO05D003384 5.4e-15 84.0 79 60.8
FvH4_6g02580 Fragaria vesca HOM05D001376 ORTHO05D003384 5.4e-15 84.0 82 61.0
SGA_v2.0_scaffold43G16267 Striga asiatica HOM05D001376 ORTHO05D003384 1.2e-14 82.8 85 62.4
EL10Ac4g09077 Beta vulgaris HOM05D001376 ORTHO05D003384 2.0e-14 82.0 84 59.5
Hma1.2p1_1029F.1_g249740 Hydrangea macrophylla HOM05D001376 ORTHO05D003384 2.0e-14 82.0 79 63.3
TAR365G0955 Trochodendron aralioides HOM05D001376 ORTHO05D003384 2.7e-14 81.6 85 58.8
Aqoxy5G00313 Aquilegia oxysepala HOM05D001376 ORTHO05D003384 5.9e-14 80.5 78 59.0
Lalb_Chr02g0142361 Lupinus albus HOM05D001376 ORTHO05D003384 5.9e-14 80.5 81 56.8
Sed0017614 Sechium edule HOM05D001376 ORTHO05D003384 5.9e-14 80.5 81 60.5
Dinv34585 Davidia involucrata HOM05D001376 ORTHO05D003384 1.0e-13 79.7 79 59.5
Sc20g0000470 Simmondsia chinensis HOM05D001376 ORTHO05D003384 1.3e-13 79.3 87 58.6
Psat6g056360 Pisum sativum HOM05D001376 ORTHO05D003384 1.7e-13 79.0 83 55.4
TPR.G9048 Trifolium pratense HOM05D001376 ORTHO05D003384 1.7e-13 79.0 83 55.4
Eucgr.H04314 Eucalyptus grandis HOM05D001376 ORTHO05D003384 2.3e-13 78.6 81 61.7
Eucgr.L01440 Eucalyptus grandis HOM05D001376 ORTHO05D003384 2.3e-13 78.6 81 61.7
Haze_04385 Corylus avellana HOM05D001376 ORTHO05D003384 3.9e-13 77.8 79 59.5
Gohir.A08G216200 Gossypium hirsutum HOM05D001376 ORTHO05D003384 3.9e-13 77.8 80 62.5
Gohir.D08G233200 Gossypium hirsutum HOM05D001376 ORTHO05D003384 3.9e-13 77.8 80 62.5
Gorai.004G247700 Gossypium raimondii HOM05D001376 ORTHO05D003384 3.9e-13 77.8 80 62.5
Lsat_1_v5_gn_4_138841 Lactuca sativa HOM05D001376 ORTHO05D003384 3.9e-13 77.8 84 53.6
CARHR078820 Cardamine hirsuta HOM05D001376 ORTHO05D003384 5.0e-13 77.4 81 56.8
Sabra13G0039500 Salix brachista HOM05D001376 ORTHO05D003384 6.6e-13 77.0 100 53.0
AL3G14650 Arabidopsis lyrata HOM05D001376 ORTHO05D003384 1.1e-12 76.3 81 55.6
Thhalv10020380m.g Eutrema salsugineum HOM05D001376 ORTHO05D003384 1.1e-12 76.3 81 55.6
AT3G04610 Arabidopsis thaliana HOM05D001376 ORTHO05D003384 1.9e-12 75.5 81 55.6
Carub.0003s0377 Capsella rubella HOM05D001376 ORTHO05D003384 1.9e-12 75.5 81 55.6
AUR62001059 Chenopodium quinoa HOM05D001376 ORTHO05D003384 1.9e-12 75.5 84 57.1
AUR62004893 Chenopodium quinoa HOM05D001376 ORTHO05D003384 1.9e-12 75.5 84 57.1
Ca_09702_v3 Cicer arietinum L. HOM05D001376 ORTHO05D003384 1.9e-12 75.5 85 52.9
Sp3g03460 Schrenkiella parvula HOM05D001376 ORTHO05D003384 1.9e-12 75.5 83 54.2
arahy.Tifrunner.gnm1.ann1.PDDC3X Arachis hypogaea HOM05D001376 ORTHO05D003384 2.5e-12 75.1 84 57.1
C03p41020 Brassica napus HOM05D001376 ORTHO05D003384 2.5e-12 75.1 82 54.9
FAN14G2565 Fragaria x ananassa HOM05D001376 ORTHO05D003384 2.5e-12 75.1 79 57.0
BcaC01g04361 Brassica carinata HOM05D001376 ORTHO05D003384 3.3e-12 74.7 82 54.9
A03p33720 Brassica napus HOM05D001376 ORTHO05D003384 3.3e-12 74.7 82 54.9
BraA03t12546Z Brassica rapa HOM05D001376 ORTHO05D003384 3.3e-12 74.7 82 54.9
Lalb_Chr06g0162581 Lupinus albus HOM05D001376 ORTHO05D003384 3.3e-12 74.7 86 55.8
SGA_v2.0_scaffold36G14393 Striga asiatica HOM05D001376 ORTHO05D003384 4.3e-12 74.3 77 63.6
unitig_746.g26849 Utricularia gibba HOM05D001376 ORTHO05D003384 4.3e-12 74.3 75 60.0
Medtr1g070380 Medicago truncatula HOM05D001376 ORTHO05D003384 5.6e-12 73.9 84 53.6
Dinv22460 Davidia involucrata HOM05D001376 ORTHO05D003384 7.3e-12 73.6 82 58.5
CDE07G1796 Ceratophyllum demersum HOM05D001376 ORTHO05D003384 9.5e-12 73.2 76 53.9
PSO017G3492 Papaver somniferum HOM05D001376 ORTHO05D003384 9.5e-12 73.2 80 58.8
PSO063G1102 Papaver somniferum HOM05D001376 ORTHO05D003384 9.5e-12 73.2 80 58.8
Rhsim01G0268000 Rhododendron simsii HOM05D001376 ORTHO05D003384 9.5e-12 73.2 82 59.8
VMungo0720G0055 Vigna mungo HOM05D001376 ORTHO05D003384 9.5e-12 73.2 84 56.0
SGA_v2.0_scaffold196G40975 Striga asiatica HOM05D001376 ORTHO05D003384 1.2e-11 72.8 81 63.0
THA.LOC104821664 Tarenaya hassleriana HOM05D001376 ORTHO05D003384 1.2e-11 72.8 80 56.2
Ah.06g192050 Amaranthus hybridus HOM05D001376 ORTHO05D003384 1.6e-11 72.4 92 51.1
MBI13_g33146_MAGBIO Magnolia biondii HOM05D001376 ORTHO05D003384 1.6e-11 72.4 105 47.6
Lalb_Chr18g0043971 Lupinus albus HOM05D001376 ORTHO05D003384 2.1e-11 72.0 59 69.5
TWI12G0820 Tripterygium wilfordii HOM05D001376 ORTHO05D003384 2.1e-11 72.0 84 56.0
Phvul.007G178400 Phaseolus vulgaris HOM05D001376 ORTHO05D003384 2.8e-11 71.6 84 54.8
Glyma.10G033900 Glycine max HOM05D001376 ORTHO05D003384 3.6e-11 71.2 84 57.1
Lj5g0021928 Lotus japonicus HOM05D001376 ORTHO05D003384 4.7e-11 70.9 84 53.6
Atru.chr2.858 Acer truncatum HOM05D001376 ORTHO05D003384 8.0e-11 70.1 62 66.1
RcHm_v2.0_Chr3g0450481 Rosa chinensis HOM05D001376 ORTHO05D003384 8.0e-11 70.1 65 58.5
Aqoxy2G03570 Aquilegia oxysepala HOM05D001376 ORTHO05D003384 2.3e-10 68.6 67 62.7
BcaB04g19312 Brassica carinata HOM05D001376 ORTHO05D003384 2.3e-10 68.6 82 53.7
MD04G1227000 Malus domestica HOM05D001376 ORTHO05D003384 2.3e-10 68.6 82 53.7
Peaxi162Scf01530g00026 Petunia axillaris HOM05D001376 ORTHO05D003384 2.3e-10 68.6 81 54.3
HPP92_018509 Vanilla planifolia HOM05D001376 ORTHO05D003384 3.1e-10 68.2 83 51.8
VMungo1383G2995 Vigna mungo HOM05D001376 ORTHO05D003384 3.1e-10 68.2 84 51.2
ECA247G2535 Erigeron canadensis HOM05D001376 ORTHO05D003384 4.0e-10 67.8 80 55.0
Hma1.2p1_0172F.1_g076340 Hydrangea macrophylla HOM05D001376 ORTHO05D003384 4.0e-10 67.8 85 56.5
Haze_24554 Corylus avellana HOM05D001376 ORTHO05D003384 6.8e-10 67.0 81 51.9
CsaV3_2G003940 Cucumis sativus L. HOM05D001376 ORTHO05D003384 6.8e-10 67.0 57 66.7
DCAR_005870 Daucus carota HOM05D001376 ORTHO05D003384 6.8e-10 67.0 78 52.6
THA.LOC104799253 Tarenaya hassleriana HOM05D001376 ORTHO05D003384 6.8e-10 67.0 81 55.6
CSS0021871 Camellia sinensis var. sinensis HOM05D001376 ORTHO05D003384 8.9e-10 66.6 88 52.3
CSS0050101 Camellia sinensis var. sinensis HOM05D001376 ORTHO05D003384 8.9e-10 66.6 88 52.3
Migut.N02189 Erythranthe guttata HOM05D001376 ORTHO05D003384 8.9e-10 66.6 78 56.4
Glyma.19G162000 Glycine max HOM05D001376 ORTHO05D003384 8.9e-10 66.6 84 50.0
Actinidia21174 Actinidia chinensis HOM05D001376 ORTHO05D003384 2.0e-09 65.5 91 56.0
Aa31LG5G15030 Aethionema arabicum HOM05D001376 ORTHO05D003384 2.0e-09 65.5 79 53.2
QL04p081310 Quercus lobata HOM05D001376 ORTHO05D003384 2.0e-09 65.5 83 53.0
arahy.Tifrunner.gnm1.ann1.PE2E54 Arachis hypogaea HOM05D001376 ORTHO05D003384 2.6e-09 65.1 79 48.1
HanXRQChr15g0468061 Helianthus annuus HOM05D001376 ORTHO05D003384 3.4e-09 64.7 80 52.5
Hund22134 Selenicereus undatus HOM05D001376 ORTHO05D003384 3.4e-09 64.7 81 54.3
vmacro02634 Vaccinium macrocarpon HOM05D001376 ORTHO05D003384 3.4e-09 64.7 80 57.5
Rhsim13G0031600 Rhododendron simsii HOM05D001376 ORTHO05D003384 4.4e-09 64.3 79 58.2
SEGI_00864 Sequoiadendron giganteum HOM05D001376 ORTHO05D003384 5.8e-09 63.9 92 43.5
FAN02G2578 Fragaria x ananassa HOM05D001376 ORTHO05D003384 7.5e-09 63.5 124 40.3
arahy.Tifrunner.gnm1.ann1.E4TWYF Arachis hypogaea HOM05D001376 ORTHO05D003384 9.8e-09 63.2 58 60.3
Peaxi162Scf00719g00516 Petunia axillaris HOM05D001376 ORTHO05D003384 1.3e-08 62.8 81 50.6
GSVIVG01000758001 Vitis vinifera HOM05D001376 ORTHO05D003384 1.7e-08 62.4 82 52.4
CiPaw.03G259100 Carya illinoinensis HOM05D001376 ORTHO05D003384 3.7e-08 61.2 86 52.3
Nitab4.5_0001044g0110 Nicotiana tabacum HOM05D001376 ORTHO05D003384 3.7e-08 61.2 81 50.6
Lj9C664T4 Lonicera japonica HOM05D001376 ORTHO05D003384 4.9e-08 60.8 129 40.3
Nitab4.5_0006433g0030 Nicotiana tabacum HOM05D001376 ORTHO05D003384 4.9e-08 60.8 81 50.6
Sc09g0004060 Simmondsia chinensis HOM05D001376 ORTHO05D003384 6.4e-08 60.5 74 54.1
Zm00001eb030980 Zea mays HOM05D001376 ORTHO05D003384 6.4e-08 60.5 85 48.2
Lj1g0005493 Lotus japonicus HOM05D001376 ORTHO05D003384 8.3e-08 60.1 85 48.2
BcaC05g29928 Brassica carinata HOM05D001376 ORTHO05D003384 1.1e-07 59.7 86 48.8
FAN05G5193 Fragaria x ananassa HOM05D001376 ORTHO05D003384 1.1e-07 59.7 79 50.6
Pp3c10_4760 Physcomitrium patens HOM05D001376 ORTHO05D003384 1.1e-07 59.7 82 45.1
Pp3c14_5750 Physcomitrium patens HOM05D001376 ORTHO05D003384 1.1e-07 59.7 83 48.2
Aqoxy2G03574 Aquilegia oxysepala HOM05D001376 ORTHO05D003384 1.4e-07 59.3 67 56.7
ClCG02G016820 Citrullus lanatus HOM05D001376 ORTHO05D003384 1.4e-07 59.3 107 43.9
Cc02_g31020 Coffea canephora HOM05D001376 ORTHO05D003384 1.4e-07 59.3 58 55.2
QL12p042978 Quercus lobata HOM05D001376 ORTHO05D003384 1.9e-07 58.9 81 50.6
Solyc06g084000.4 Solanum lycopersicum HOM05D001376 ORTHO05D003384 1.9e-07 58.9 79 46.8
Sopen06g035390 Solanum pennellii HOM05D001376 ORTHO05D003384 1.9e-07 58.9 79 46.8
C05p62660 Brassica napus HOM05D001376 ORTHO05D003384 4.1e-07 57.8 65 53.8
Sopen09g027880 Solanum pennellii HOM05D001376 ORTHO05D003384 7.0e-07 57.0 84 47.6
FAN05G5449 Fragaria x ananassa HOM05D001376 ORTHO05D003384 9.2e-07 56.6 77 44.2
HanXRQChr11g0336681 Helianthus annuus HOM05D001376 ORTHO05D003384 9.2e-07 56.6 79 48.1
Actinidia09085 Actinidia chinensis HOM05D001376 ORTHO05D003384 1.2e-06 56.2 79 50.6
CAN.G1501.2 Capsicum annuum HOM05D001376 ORTHO05D003384 1.2e-06 56.2 82 48.8
COL.COLO4_03736 Corchorus olitorius HOM05D001376 ORTHO05D003384 2.0e-06 55.5 79 48.1
Solyc09g066120.4 Solanum lycopersicum HOM05D001376 ORTHO05D003384 2.7e-06 55.1 84 46.4
ATR0665G324 Amborella trichopoda HOM05D001376 ORTHO05D003384 3.5e-06 54.7 105 41.0
PGSC0003DMG400020065 Solanum tuberosum HOM05D001376 ORTHO05D003384 3.5e-06 54.7 79 45.6
Mapoly0051s0075 Marchantia polymorpha HOM05D001376 ORTHO05D003384 4.6e-06 54.3 77 46.8
vmacro13821 Vaccinium macrocarpon HOM05D001376 ORTHO05D003384 6.0e-06 53.9 63 57.1
CAN.G771.18 Capsicum annuum HOM05D001376 ORTHO05D003384 7.8e-06 53.5 54 55.6


User provided reference genes

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